Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00750
         (564 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23170-1|AAC46699.1|  163|Caenorhabditis elegans Hypothetical pr...    67   9e-12
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p...    31   0.57 
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr...    31   0.57 
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical...    28   5.3  
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    27   9.3  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    27   9.3  

>U23170-1|AAC46699.1|  163|Caenorhabditis elegans Hypothetical
           protein F58F12.1 protein.
          Length = 163

 Score = 66.9 bits (156), Expect = 9e-12
 Identities = 27/57 (47%), Positives = 41/57 (71%)
 Frame = +2

Query: 71  DEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILENDG 241
           +E+ LTFA+ +   +   VVKQ+DVP+ +G  G+L  HVPT+ VL+PGVV++  N+G
Sbjct: 29  EELRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTNEG 85



 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 25/41 (60%), Positives = 29/41 (70%)
 Frame = +1

Query: 256 FVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQ 378
           FVSSGT++VN D S QVLAEE   +E ID SAA+  L  AQ
Sbjct: 91  FVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQ 131


>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
           protein F11C3.3 protein.
          Length = 1963

 Score = 31.1 bits (67), Expect = 0.57
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 59  APKGDEMALTFAAGNKVFYDKQVVKQIDVPSF 154
           A KGD++ +  A GN+V   K++V++++ P F
Sbjct: 49  ATKGDQVTIVTARGNEVTLKKELVQEMNPPKF 80


>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
           protein F11C3.3 protein.
          Length = 1963

 Score = 31.1 bits (67), Expect = 0.57
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 59  APKGDEMALTFAAGNKVFYDKQVVKQIDVPSF 154
           A KGD++ +  A GN+V   K++V++++ P F
Sbjct: 49  ATKGDQVTIVTARGNEVTLKKELVQEMNPPKF 80


>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
           protein ZK430.1 protein.
          Length = 1650

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +1

Query: 256 FVSSGTITVNDDSSVQVLAEEAHPLESIDRSAAQEALSKAQS 381
           F S        + S+++++EEA   + I  +A+++A   AQS
Sbjct: 459 FASEAVAATQSEESIEIISEEAPSSKKIKLTASEKAQKLAQS 500


>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
           protein Y47D3A.29 protein.
          Length = 1428

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = +2

Query: 113 YDKQVVKQIDVPSFSGAFGILPKHVPTLAVLRPGVVTILENDGKQNK 253
           Y K   +Q+ VP  +   G+LP+ +  L   R  V ++++++  + K
Sbjct: 859 YSKDSDEQLSVPQSTDIEGVLPREIRKLVECRRDVKSLMKSERNEAK 905


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
            protein.
          Length = 1492

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 361  PPVQHYGQCSPEGEPLRLKPELRSHH 284
            PP     Q SP+G P+   P   SHH
Sbjct: 1244 PPALSVFQHSPQGAPITAPPPASSHH 1269


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
            protein Y53H1C.2a protein.
          Length = 1512

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 361  PPVQHYGQCSPEGEPLRLKPELRSHH 284
            PP     Q SP+G P+   P   SHH
Sbjct: 1264 PPALSVFQHSPQGAPITAPPPASSHH 1289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,474,307
Number of Sequences: 27780
Number of extensions: 187682
Number of successful extensions: 408
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)