Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00747
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   3.4  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   4.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   5.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   5.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   7.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   7.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 165 FVAQSLNKFLVCG 127
           F+ +  NKF++CG
Sbjct: 317 FLQEGANKFVICG 329


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 258 FSCLAILVNLAETSPFSKLFVVVNLDQ 178
           F  +AI  +LAE S ++  +  V+LD+
Sbjct: 9   FFVIAIASSLAENSKYTTKYDNVDLDE 35


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -2

Query: 124 HHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAP 11
           HHS  P H V  A+  E           + G +L  +P
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQLMPSP 89


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -2

Query: 124 HHSSQPKHIVLLASCQEL*RLREDRAQDHHGLKLSLAP 11
           HHS  P H V  A+  E           + G +L  +P
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQLMPSP 89


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 294 GEETPALDVLKDYLKXXXXXLGVML 368
           G +    D+  DYL      LGV L
Sbjct: 22  GSKKTVFDIPNDYLNDKYKPLGVSL 46


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 240 GWQGKKIVGCSCV 278
           G+QG+ +V  SCV
Sbjct: 109 GYQGRAVVVVSCV 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,309
Number of Sequences: 336
Number of extensions: 1617
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)