Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00747
(395 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 116 9e-27
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 116 9e-27
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 33 0.083
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 31 0.34
05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,375... 30 0.59
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 29 1.0
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 29 1.4
12_01_1092 - 11362094-11362367,11362739-11362795,11363256-113636... 28 2.4
09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219 28 2.4
08_02_0101 + 12374476-12376683 28 2.4
05_04_0167 + 18668004-18668287,18668961-18669043,18669346-186694... 28 2.4
06_03_0493 + 21402536-21404599 28 3.1
02_02_0015 + 6109552-6109650,6110006-6110078,6111937-6111998,611... 27 4.1
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536... 27 5.5
11_03_0180 - 11294527-11294823,11295847-11295852 27 7.2
09_02_0084 + 4106803-4106851,4108165-4108460 27 7.2
06_03_0194 + 17775189-17775482,17775793-17775844,17775934-177759... 27 7.2
05_03_0074 + 8095355-8096575,8096664-8096901,8096990-8097667,809... 27 7.2
04_03_0183 + 12352147-12352179,12352390-12353349,12353815-123539... 27 7.2
06_01_0828 + 6250860-6250992,6251082-6251211,6251284-6251989 26 9.6
04_04_0753 - 27797298-27797547,27797765-27797951,27798040-277981... 26 9.6
04_01_0511 + 6678765-6678801,6678904-6679923,6680012-6680718 26 9.6
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 26 9.6
02_03_0026 - 14045653-14045874,14047023-14047215,14047518-140476... 26 9.6
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 116 bits (278), Expect = 9e-27
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 1 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 180
ALQ V+K + H GLV GL EAAKA++K A LCVLAE+CD+ Y KLV+ALC EH + L
Sbjct: 24 ALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHL 83
Query: 181 VKVDNNKKLGEWAGLCKIDKDGKARKL 261
V V + K LGEWAGLCKID +GKARK+
Sbjct: 84 VTVPSAKTLGEWAGLCKIDSEGKARKV 110
Score = 50.8 bits (116), Expect = 4e-07
Identities = 18/31 (58%), Positives = 28/31 (90%)
Frame = +3
Query: 246 QGKKIVGCSCVVIKDFGEETPALDVLKDYLK 338
+ +K+VGCSCVV+KDFGEE+ L++++DY+K
Sbjct: 106 KARKVVGCSCVVVKDFGEESEGLNIVQDYVK 136
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 116 bits (278), Expect = 9e-27
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = +1
Query: 1 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 180
ALQ V+K + H GLV GL EAAKA++K A LCVLAE+CD+ Y KLV+ALC EH + L
Sbjct: 24 ALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHL 83
Query: 181 VKVDNNKKLGEWAGLCKIDKDGKARKL 261
V V + K LGEWAGLCKID +GKARK+
Sbjct: 84 VTVPSAKTLGEWAGLCKIDSEGKARKV 110
Score = 49.6 bits (113), Expect = 9e-07
Identities = 17/31 (54%), Positives = 28/31 (90%)
Frame = +3
Query: 246 QGKKIVGCSCVVIKDFGEETPALDVLKDYLK 338
+ +K+VGCSCVV+KD+GEE+ L++++DY+K
Sbjct: 106 KARKVVGCSCVVVKDYGEESEGLNIVQDYVK 136
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 33.1 bits (72), Expect = 0.083
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 43 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 222
L G+ E K++ + Q LC++A N V LC E IP V V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AG 103
Query: 223 LCK 231
K
Sbjct: 104 TTK 106
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 31.1 bits (67), Expect = 0.34
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 43 LVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 222
L G+ E K++ + LCV+A N V LC E IP + V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLAT-AG 103
Query: 223 LCK 231
K
Sbjct: 104 TTK 106
>05_01_0471 -
3751497-3751522,3751760-3751800,3752466-3752507,
3753249-3753310,3753398-3753584,3753692-3753826,
3753872-3753948,3754005-3754076,3754389-3754588,
3754675-3755020,3755463-3755519,3755655-3757433,
3757539-3757720,3757943-3758072
Length = 1111
Score = 30.3 bits (65), Expect = 0.59
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -2
Query: 313 NAGVSSPKSLMTTQEQPTIFLPCHPCQSCRDQPILQAFCCCQP*PVESDVRCTEPEQVSC 134
NA +S P+ + + QP + LPC P Q ++P A C V +++ + C
Sbjct: 440 NASLSCPEQHVLEETQPNVSLPC-PGQYVPEEPQANASLSCPEQHVPEEIQAN--ASLPC 496
Query: 133 MRLHHSSQPK 104
H +P+
Sbjct: 497 PDQHVPEEPQ 506
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 49 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 210
+GL+ +++ +A L V+A + D + ALC + ++P V +LG
Sbjct: 130 YGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLG 183
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 49 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 210
+GL +++ +A L V+A + D + ALC + +IP V +LG
Sbjct: 115 YGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG 168
>12_01_1092 -
11362094-11362367,11362739-11362795,11363256-11363683,
11364350-11365462
Length = 623
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 109 AENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 210
A CDE +K + +CN + L + D+N +G
Sbjct: 316 AFKCDEYTVRKCSKVICNRSKNSLYRFDSNASIG 349
>09_02_0553 - 10565450-10565529,10565652-10565792,10565793-10566219
Length = 215
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 176 HWSRLTTTKSLENGLVSARLTRMARQENCRLLLCCHQRFRRGNSSV 313
H L TK +N SARL + R+ENCR H GN +
Sbjct: 80 HLIDLVETK--DNSPSSARLEELLRKENCRKETAFHDAVCIGNKDI 123
>08_02_0101 + 12374476-12376683
Length = 735
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 4 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENC--DEAAYKKLVQALC 159
L+ L+TA + L+HGL A + + + A++C D Y +V LC
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLC 188
>05_04_0167 +
18668004-18668287,18668961-18669043,18669346-18669434,
18670085-18670158,18670234-18670284,18671486-18671553,
18671666-18672234,18672333-18672383
Length = 422
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 178 VESDVRCTEPEQVSCMRLHHSSQPKHIVLLA 86
+ES ++ TEP + + LH +S+P +VL A
Sbjct: 268 IESSMQRTEPYKFPSLGLHSNSKPSSVVLSA 298
>06_03_0493 + 21402536-21404599
Length = 687
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 10 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVK 186
E+L T LIHG ++ E A L + D + Y L+Q LCN H++ K
Sbjct: 398 ELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL---ELDISLYGALIQGLCNVHKLDEAK 453
>02_02_0015 +
6109552-6109650,6110006-6110078,6111937-6111998,
6112315-6112376,6112463-6112556,6112673-6113227,
6113379-6113870,6113967-6114137,6115713-6115817,
6115903-6116052,6116372-6116498,6116585-6116648,
6117147-6117203,6117423-6117555,6117660-6117746
Length = 776
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 313 NAGVSSPKSLMTTQEQPTIFLPCHPCQSCRDQPILQ 206
+A V P+S T+Q+QP P P + QP ++
Sbjct: 351 SASVPPPQSTPTSQQQPASAQPVQPVNAPAQQPAVE 386
>11_06_0013 -
19252779-19252805,19252947-19253090,19253572-19253663,
19253757-19253835,19253965-19254031,19254163-19254254,
19254986-19255102,19255254-19255365,19255479-19255594,
19255680-19255756,19255912-19255993,19256077-19256214,
19258806-19259009
Length = 448
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 28 LIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKL 207
++ GG HG+HE +D R+ L + + A LV ALC +I L +V + +
Sbjct: 139 ILQGGFFHGIHELTYGVDIRKIRLMGVLQ---RIAIAYLVVALC---EIWLRRVSSGGNI 192
Query: 208 G 210
G
Sbjct: 193 G 193
>11_03_0180 - 11294527-11294823,11295847-11295852
Length = 100
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 133 MRLHHSSQPKHIVLLASCQEL*RLREDRAQ 44
+RLHH S I +LA C++ L+E+R +
Sbjct: 3 VRLHHWSDEDCIKILAQCKKAVPLQEERGK 32
>09_02_0084 + 4106803-4106851,4108165-4108460
Length = 114
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 25 ALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNN 198
A+ GL +A + DK Q L +N EAA K QAL + +K +N
Sbjct: 53 AIFQNGLGSSFDDAVELFDKLQCALDKYYKNIAEAATKWASQALAMTKTLNQLKFCSN 110
>06_03_0194 +
17775189-17775482,17775793-17775844,17775934-17775959,
17776525-17776869,17777231-17777287
Length = 257
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 86 GKQYYVFWLRTVMKPHTRNLFRLCATNIRFHWSRLTTTKSLENGLVSARL 235
G +++ RT +KPH L+ ++ W+ + + E ARL
Sbjct: 92 GHLHFLHMERTKLKPHRCELYASLGPQLQMGWTNIQLCQVAERDAAIARL 141
>05_03_0074 +
8095355-8096575,8096664-8096901,8096990-8097667,
8097787-8097974
Length = 774
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 64 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 204
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 570 AMDLLEFTKAELDVLREDCGWKEFLGKVTSFCVKHKVKVVDMDGKYK 616
>04_03_0183 +
12352147-12352179,12352390-12353349,12353815-12353998,
12354087-12354799
Length = 629
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 64 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 204
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 475 AMDLLEFTKAELDVLREDCGWKEFLGKVTSFCVKHKVKVVDMDGKYK 521
>06_01_0828 + 6250860-6250992,6251082-6251211,6251284-6251989
Length = 322
Score = 26.2 bits (55), Expect = 9.6
Identities = 18/71 (25%), Positives = 26/71 (36%)
Frame = +1
Query: 7 QEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVK 186
QE+ KT L +V+G + D ++ EN VQ CN P
Sbjct: 239 QEIGKTNLFSNNIVNGNEWCSMEADNSSQKSLLVPENSIPPLIDMPVQNFCNTISTPNCD 298
Query: 187 VDNNKKLGEWA 219
N+ L W+
Sbjct: 299 GGNSIPLPSWS 309
>04_04_0753 -
27797298-27797547,27797765-27797951,27798040-27798113,
27798719-27798949,27799047-27799133,27799244-27799434
Length = 339
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 37 GGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKK 141
GGL+ G+ AAKA++ +L + D++A K
Sbjct: 196 GGLISGVALAAKAINPSIRILAAEPKGADDSAQSK 230
>04_01_0511 + 6678765-6678801,6678904-6679923,6680012-6680718
Length = 587
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 64 AAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK 204
A L+ +A L VL E+C + V + C +H++ +V +D K
Sbjct: 436 AMDLLEFTKAELDVLREDCGCKEFLGKVTSFCVKHKVKVVDMDGKYK 482
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 26.2 bits (55), Expect = 9.6
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = +2
Query: 41 VLCTVFTKPLKLLTRGKQYYVFWLRTVMKPHTRNLFRLCATNIRFHWSRLTTTKSLENGL 220
+L F+ LK+++ K++ + L+ + + R+C ++ H S+LTTT S + L
Sbjct: 701 LLSLPFSDALKIMSYLKEWSMVPLKVEL------VCRVCLVLLQTHHSQLTTTPSARSIL 754
Query: 221 VSARLTRMARQENCR 265
+ +R + C+
Sbjct: 755 TELKGILYSRVKECK 769
>02_03_0026 -
14045653-14045874,14047023-14047215,14047518-14047618,
14050145-14050272,14050409-14050502,14050749-14051237,
14052622-14052915,14053602-14053732,14053829-14055440,
14055539-14055651,14055902-14056933,14057023-14057145,
14057250-14057688
Length = 1656
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 190 DNNKKLGEWAGLCKIDKDGKARKLSAAPVLSSKISARKL 306
+ NK EW K G S +PVL++ ISA +L
Sbjct: 19 ERNKYQREWRARKKAKLSGTGNVTSDSPVLATTISATEL 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,349,187
Number of Sequences: 37544
Number of extensions: 192033
Number of successful extensions: 670
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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