Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00747
(395 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 148 1e-36
SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_33518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.26
SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24) 31 0.34
SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_43706| Best HMM Match : RVP (HMM E-Value=1.4) 29 1.4
SB_59421| Best HMM Match : RVT_1 (HMM E-Value=0.18) 29 1.8
SB_56925| Best HMM Match : RVP (HMM E-Value=2.3) 29 1.8
SB_54241| Best HMM Match : YaeQ (HMM E-Value=8.4) 29 1.8
SB_44556| Best HMM Match : RVP (HMM E-Value=2.3) 29 1.8
SB_38556| Best HMM Match : RVP (HMM E-Value=1.4) 29 1.8
SB_32503| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 29 1.8
SB_7574| Best HMM Match : RVP (HMM E-Value=2.3) 29 1.8
SB_5732| Best HMM Match : LTXXQ (HMM E-Value=6.6) 29 1.8
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_46234| Best HMM Match : Herpes_BLRF2 (HMM E-Value=2.7) 29 1.8
SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59) 29 1.8
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 29 1.8
SB_15162| Best HMM Match : LTXXQ (HMM E-Value=6.6) 29 1.8
SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_2589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 27 4.2
SB_17383| Best HMM Match : LytTR (HMM E-Value=2.4) 27 4.2
SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09) 27 5.5
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_50685| Best HMM Match : Herpes_BLRF2 (HMM E-Value=2) 27 5.5
SB_54602| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_54594| Best HMM Match : Ank (HMM E-Value=4.4e-11) 27 7.3
SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10) 27 7.3
SB_18943| Best HMM Match : DUF753 (HMM E-Value=5.9) 27 7.3
SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25) 27 7.3
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 26 9.6
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 148 bits (359), Expect = 1e-36
Identities = 68/87 (78%), Positives = 78/87 (89%)
Frame = +1
Query: 1 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPL 180
ALQEVLKTALIH GL GLHEAAK+LDKR+A LC+L+ NCDEA Y KLV+ALC EH IPL
Sbjct: 24 ALQEVLKTALIHDGLSRGLHEAAKSLDKREAHLCILSNNCDEAMYVKLVEALCAEHGIPL 83
Query: 181 VKVDNNKKLGEWAGLCKIDKDGKARKL 261
+KVD++KKLGEWAGLCKIDK+GKARK+
Sbjct: 84 LKVDDSKKLGEWAGLCKIDKEGKARKV 110
Score = 27.9 bits (59), Expect = 3.2
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 246 QGKKIVGCSCVVIK 287
+ +K+VGCSCVV+K
Sbjct: 106 KARKVVGCSCVVVK 119
>SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 79 DKRQAVLCVLAEN--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 222
D LCVL EN D + +L++A C E+ IP+VKVD+++KL AG
Sbjct: 2 DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53
>SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 79 DKRQAVLCVLAEN--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 222
D LCVL EN D + +L++A C E+ IP+VKVD+++KL AG
Sbjct: 2 DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53
>SB_33518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 31.5 bits (68), Expect = 0.26
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVCGFITVLSQNT*YCL 88
SR F C VNL S + F VNL +W++ F A +L+++ +C F TV C
Sbjct: 238 SRWFICFQD-VNL---SRWFMCFQAVNLSRWSMCFQAVNLSRWFMC-FQTVNLSRWFMCF 292
Query: 87 PLVKSFSGFV 58
V F F+
Sbjct: 293 QAVNLFRWFM 302
Score = 30.3 bits (65), Expect = 0.59
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
SR F C VNL S +S F VNL +W + F A +L+++ +C
Sbjct: 166 SRWFMCFQA-VNL---SRWSMCFQTVNLSRWFMCFQAVNLSRWFMC 207
Score = 28.3 bits (60), Expect = 2.4
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVCGFITV 115
SR F C VNL S + F VNL +W + F A +L+++ +C F TV
Sbjct: 106 SRWFMCFQA-VNL---SRWFMCFQAVNLSRWLMCFQAVNLSRWFMC-FQTV 151
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVCGFITVLSQ 106
SR F C VNL S + F VNL +W + F A +L+++ +C LS+
Sbjct: 406 SRWFMCFQA-VNL---SRWFMCFQTVNLSRWFMCFQAVNLSRWFMCFHAVNLSR 455
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 264 RQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
R F C VNL S + F VNL +W + F A +L+++L+C
Sbjct: 95 RWFMCFQT-VNL---SRWFMCFQAVNLSRWFMCFQAVNLSRWLMC 135
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
SR F C VNL S + F VNL +W + F A +L+++ +C
Sbjct: 190 SRWFMCFQA-VNL---SRWFMCFQAVNLSRWLMCFQAVNLSRWFMC 231
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 264 RQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
R F C VNL S + F VNL +W + F A +L+++L+C
Sbjct: 299 RWFMCFQT-VNL---SRWFMCFQAVNLSRWFMCFQAVNLSRWLMC 339
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
SR F C VNL S + F VNL +W + F A +L+++ +C
Sbjct: 310 SRWFMCFQA-VNL---SRWFMCFQAVNLSRWLMCFQAVNLSRWFMC 351
Score = 27.9 bits (59), Expect = 3.2
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVCGFITV 115
SR F C VNL S + F VNL +W + F A +L+++ +C F TV
Sbjct: 382 SRWFMCFQA-VNL---SRWFMCFHAVNLSRWFMCFQAVNLSRWFMC-FQTV 427
Score = 27.5 bits (58), Expect = 4.2
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
SR F C VNL S + F VNL +W + F A +L+++ +C
Sbjct: 370 SRWFMCFQA-VNL---SRWFMCFQAVNLSRWFMCFHAVNLSRWFMC 411
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
SR F C VNL S + F VNL +W + F +L+++ +C
Sbjct: 118 SRWFMCFQA-VNL---SRWLMCFQAVNLSRWFMCFQTVNLSRWFIC 159
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVCGFITVLSQ 106
SR F C VNL S + F VNL +W + F A +L+++ +C LS+
Sbjct: 358 SRWFICFQD-VNL---SRWFMCFQAVNLSRWFMCFQAVNLSRWFMCFHAVNLSR 407
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
SR F C VNL S + F VNL +W + F +L+++ +C
Sbjct: 202 SRWFMCFQA-VNL---SRWLMCFQAVNLSRWFMCFHPVNLSRWFIC 243
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 267 SRQFSCLAILVNLAETSPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 130
SR F C VNL S + F VNL +W + F +L+++ +C
Sbjct: 322 SRWFMCFQA-VNL---SRWLMCFQAVNLSRWFMCFHPVNLSRWFIC 363
>SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24)
Length = 172
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 49 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 213
+G++ ++ ++A L V+A + D + ALC + Q+P V +LG+
Sbjct: 47 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 101
>SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 31.1 bits (67), Expect = 0.34
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 49 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 213
+G++ ++ ++A L V+A + D + ALC + Q+P V +LG+
Sbjct: 138 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 192
>SB_43706| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 577
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 268 IADIFDDNDSVLETHAQMPSTESIDPPAH 296
>SB_59421| Best HMM Match : RVT_1 (HMM E-Value=0.18)
Length = 484
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 113 IADIFDDNDSELETHAQMPSTESIDPPAH 141
>SB_56925| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 226
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 86 IADIFDDNDSELETHAQMPSTESIDPPAH 114
>SB_54241| Best HMM Match : YaeQ (HMM E-Value=8.4)
Length = 182
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 13 IADIFDDNDSELETHAQMPSTESIDPPAH 41
>SB_44556| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 305
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 165 IADIFDDNDSELETHAQMPSTESIDPPAH 193
>SB_38556| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 230
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 13 IADIFDDNDSELETHAQMPSTESIDPPAH 41
>SB_32503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 7 IADIFDDNDSELETHAQMPSTESIDPPAH 35
>SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 1283
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 269 IADIFDDNDSELETHAQMPSTESIDPPAH 297
>SB_7574| Best HMM Match : RVP (HMM E-Value=2.3)
Length = 253
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 113 IADIFDDNDSELETHAQMPSTESIDPPAH 141
>SB_5732| Best HMM Match : LTXXQ (HMM E-Value=6.6)
Length = 369
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 315 IADIFDDNDSELETHAQMPSTESIDPPAH 343
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 315 IADIFDDNDSELETHAQMPSTESIDPPAH 343
>SB_46234| Best HMM Match : Herpes_BLRF2 (HMM E-Value=2.7)
Length = 271
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 185 IADIFDDNDSELETHAQMPSTESIDPPAH 213
>SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59)
Length = 810
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 237 IADIFDDNDSELETHAQMPSTESIDPPAH 265
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 278 IADIFDDNDSELETHAQMPSTESIDPPAH 306
>SB_15162| Best HMM Match : LTXXQ (HMM E-Value=6.6)
Length = 401
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + PAH
Sbjct: 315 IADIFDDNDSELETHAQMPSTESIDPPAH 343
>SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1957
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 37 GGLVHGLHEAAK--ALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQI 174
G L LHE +K +L R A+ C ++E + +++V N H I
Sbjct: 167 GSLHFVLHETSKEISLPDRVAIFCDVSEGLEFLKSRRIVHCFLNSHSI 214
>SB_2589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 270 SSRQFSCLAILVNLAETSPFSKLFVVVNLDQW 175
S R + C+ LV LA P +K +++ N +W
Sbjct: 140 SRRAYQCIKFLVQLAHRCPTAKDYLLQNSTRW 171
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 308 SVGCAQGLPQVVELILRCNANPY 376
S+ CA G VVEL+L ANPY
Sbjct: 83 SLACAGGHLAVVELLLAHGANPY 105
>SB_17383| Best HMM Match : LytTR (HMM E-Value=2.4)
Length = 536
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 265 PTIFLPCHPCQSCRDQPILQAFCCCQP*PVESDVRCT-EPEQVSC 134
P+ F PCH C R++ +Q +E+ ++ T E +++ C
Sbjct: 285 PSSFCPCHSCYEMRERVRVQWMLSPDSFLLETQIKLTNERQEIEC 329
>SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09)
Length = 330
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 7 QEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 147
+ +L+ +G ++ L A + R LCV A CDE ++ LV
Sbjct: 70 KSLLQQPCPNGRVILSLAVADLCIGLRLEALCVFAARCDEMTWRVLV 116
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 27.1 bits (57), Expect = 5.5
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +1
Query: 40 GLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWA 219
G + L E K L K + V LAE +A K+ Q N+H VD ++ +
Sbjct: 1931 GAIRALQEVKKHLGKLEPVSSTLAELRTQAQQFKVYQNEINKHG---TTVDALNEM--FH 1985
Query: 220 GLCKIDKDGKARKLS 264
GL K K+ K ++L+
Sbjct: 1986 GLKKKQKESKLKQLN 2000
>SB_50685| Best HMM Match : Herpes_BLRF2 (HMM E-Value=2)
Length = 253
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 299 LAEIFDDNTGAADNFLALPSLSILQRPAH 213
+A+IFDDN + +PS + P H
Sbjct: 206 IADIFDDNDSELETHAQMPSTESIDPPGH 234
>SB_54602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 142 VSCMRLHHSSQPKHIVLLASCQEL*RLREDRAQDHHGLK 26
VSC +LH S+ KH LA E L E+ + LK
Sbjct: 358 VSCQKLHWSTHKKHCQRLAKEYEQELLMEEEIKRQEELK 396
>SB_54594| Best HMM Match : Ank (HMM E-Value=4.4e-11)
Length = 733
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -2
Query: 292 KSLMTTQEQPTIFLPCHPCQSCRDQPILQAFC--CCQP*PVESDVRCTEPE 146
K+ +T ++Q T +L C C + R FC C P P R PE
Sbjct: 225 KTQVTKRQQETDYLKCIFCFAARPSDPFARFCTECGSPLPPMPQSRLPPPE 275
>SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10)
Length = 262
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 112 ENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDG 246
E+ + Y ++ +L E Q PL+ V + + E LC + + G
Sbjct: 125 EDFTDLDYNTMMASLIGEEQPPLIAVSDTPAIMEVESLCSLIRGG 169
>SB_18943| Best HMM Match : DUF753 (HMM E-Value=5.9)
Length = 676
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 299 GNSSVGCAQGLPQVVELILRCNANPYKLN 385
G ++ G Q +PQ+ ++ RC + Y +N
Sbjct: 629 GGATAGAGQEVPQLQRIVARCGCDFYYVN 657
>SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25)
Length = 401
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 365 HYT*GLARRLEVVLEHIQRWSFLAEIFD 282
HY RR E+ L+ +Q+W L E F+
Sbjct: 254 HYRWDKLRRAEIDLQRVQQWIKLEEAFE 281
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 10 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEA 129
E KT + GL + EA+++LDK Q L LA DEA
Sbjct: 1603 EKTKTGRLQSGLKR-IDEASRSLDKMQQELDQLAPVYDEA 1641
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,040,332
Number of Sequences: 59808
Number of extensions: 235330
Number of successful extensions: 707
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 690807992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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