Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00747
         (395 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   2.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   2.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   3.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   3.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   9.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 187  P*PVESDVRCTEPEQVSCMRLHHSSQ 110
            P  VESD   ++P+Q++  R   S+Q
Sbjct: 1777 PGDVESDESESDPDQLTSSRTESSNQ 1802


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 187  P*PVESDVRCTEPEQVSCMRLHHSSQ 110
            P  VESD   ++P+Q++  R   S+Q
Sbjct: 1773 PGDVESDESESDPDQLTSSRTESSNQ 1798


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 176 HWSRLTTTKSLENGLVS 226
           HWSR  T  SL+N  +S
Sbjct: 22  HWSRGNTWLSLDNSNMS 38


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 176 HWSRLTTTKSLENGLVS 226
           HWSR  T  SL+N  +S
Sbjct: 22  HWSRGNTWLSLDNSNMS 38


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 46  QDHHGLKLSLAPLAV 2
           Q HHGL ++ +P +V
Sbjct: 808 QSHHGLHINSSPSSV 822


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 55  LHEAAKALDKRQAVLC 102
           +H+A K L++R   LC
Sbjct: 79  IHDAYKDLNQRYGALC 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,306
Number of Sequences: 438
Number of extensions: 1727
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)