Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00746
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -2

Query: 439  LKKSSPSVNITGYNYIGKNAQNEHGGV 359
            +++  P        ++G NAQ++ GG+
Sbjct: 1051 IEEKKPEKKDKVLTFLGANAQDDEGGL 1077


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -2

Query: 439  LKKSSPSVNITGYNYIGKNAQNEHGGV 359
            +++  P        ++G NAQ++ GG+
Sbjct: 1051 IEEKKPEKKDKVLTFLGANAQDDEGGL 1077


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +2

Query: 326 FVLKSISYQYTYTAMLVLCIFSNVIVSGYINRRT 427
           F L  +S  +TY  M++ C+++      ++  +T
Sbjct: 319 FCLNILSI-FTYVPMILYCVYTTATYDSFMIYKT 351


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +2

Query: 326 FVLKSISYQYTYTAMLVLCIFSNVIVSGYINRRT 427
           F L  +S  +TY  M++ C+++      ++  +T
Sbjct: 44  FCLNILSI-FTYVPMILYCVYTTATYDSFMIYKT 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,497
Number of Sequences: 336
Number of extensions: 3856
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)