Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00746
(695 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 50 9e-08
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 48 2e-07
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 44 6e-06
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 43 1e-05
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 40 1e-04
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 38 2e-04
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 38 3e-04
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 33 0.011
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 32 0.020
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 25 2.3
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 5.3
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 5.3
CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein... 23 7.0
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 23 9.2
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 9.2
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 49.6 bits (113), Expect = 9e-08
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = -2
Query: 310 FYQDIQSIAIVVSTVSGPVPFFVYIVHHIAFGCSTTKSRGRELIDIFDELDLCILNTGSA 131
F + I+++ + T S V + H+ +G +G EL+ +LDL +LN G+
Sbjct: 102 FERFIEAVQLETLTHSQVVIAGDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTT 161
Query: 130 TTIQRPG-FNSSAIDVTCVSPVLAPLCEWKV-GDDPHGSYHYPTF 2
+T G +S +DV +P +A W V GD + + Y T+
Sbjct: 162 STFDGNGAATASIVDVAFATPTIAQPGTWNVCGDYSYSDHRYITY 206
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 695 NVSYENLLNDNQFLEIIVKTIVMIANSNSAKTMTH 591
NV + +D++++ V TIV + N S+ M H
Sbjct: 191 NVCGDYSYSDHRYITYTVGTIVPVVNEPSSPRMRH 225
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 48.4 bits (110), Expect = 2e-07
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = -2
Query: 310 FYQDIQSIAIVVSTVSGPVPFFVYIVHHIAFGCSTTKSRGRELIDIFDELDLCILNTGSA 131
F + + ++ I VS V + H A+G + TK +G EL++ ++L L +LN G+
Sbjct: 99 FEEFLNAVEIEVSAHPNVVLGGDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNT 158
Query: 130 TTIQRPGF-NSSAIDVTCVSPVLAPLCEWKV 41
+T G S IDVT SP + W+V
Sbjct: 159 STFTGRGIAGESVIDVTFASPSIVRYNTWEV 189
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 43.6 bits (98), Expect = 6e-06
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -2
Query: 229 HIAFGCSTTKSRGRELIDIFDELDLCILNTGSATT-IQRPGFNSSAIDVTCVSPVLAPLC 53
H +G RG EL+ + + L L ILN GSA T I R S IDVT +P L
Sbjct: 128 HTEWGSRRNNLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTFATPSLVLHD 187
Query: 52 EWKVGD 35
W+V D
Sbjct: 188 TWEVLD 193
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 42.7 bits (96), Expect = 1e-05
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -2
Query: 220 FGCSTTKSRGRELIDIFDELDLCILNTGSATTIQRPGFNSSAIDVTCVSPVLAPLCEWKV 41
+G +T +RG +++ F L+L ++N G T R +S ID+T SP LA W+V
Sbjct: 128 WGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVR-NSRTSIIDLTFCSPALASSMNWRV 186
Query: 40 GD 35
+
Sbjct: 187 SN 188
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 39.5 bits (88), Expect = 1e-04
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -2
Query: 229 HIAFGCSTTKSRGRELIDIFDELDLCILNTGSATT-IQRPGFNSSAIDVTCVSPVLAPLC 53
H +G + RG +L+ + + L ++N+G+ T I R SS IDV +P +A
Sbjct: 148 HTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCFATPSIARPE 207
Query: 52 EWKVGDDPHGSYHYPTF 2
W+V + + T+
Sbjct: 208 TWEVHEFARSDHQLITY 224
Score = 25.8 bits (54), Expect = 1.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 371 AWRCRYIDKKYSSIQNYQNSILSGYSKYRYCSVDSIRTSSILCVYCP 231
AW+ R K+ + + + I+SG+ +R D TSS C CP
Sbjct: 922 AWQSR----KHGEVNFHLSQIISGHGFFRKYLADMKFTSSPDCPNCP 964
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 38.3 bits (85), Expect = 2e-04
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = -2
Query: 226 IAFGCSTTKSRGRELIDIFDELDLCILNTGSATTIQRPGFNSSAIDVTCVSPVLAPLCEW 47
+ +G T SRG +++ F L + + N G+ T R +S +D+T S L+ W
Sbjct: 124 VEWGSKRTNSRGDAVLESFARLGVTLGNAGTTPTFNR-NKRTSIVDITFCSTTLSERLNW 182
Query: 46 KVGD 35
+V D
Sbjct: 183 RVSD 186
Score = 25.0 bits (52), Expect = 2.3
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 356 YIDKKYSSIQNYQNSILSGYSKYRYCSVDSIRTSSILCVYC 234
++D+K+ + + +LSG+ +R R SS C C
Sbjct: 934 WLDRKHGDVDYFVTQVLSGHGCFRSYLHRFNRASSSRCPAC 974
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 37.9 bits (84), Expect = 3e-04
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -2
Query: 229 HIAFGCSTTKSRGRELIDIFDELDLCILNTGSATTIQRPGF-NSSAIDVTCVSPVLA 62
H A+G T ++G ++ + D L L +LNTG+A T G S +DV S +A
Sbjct: 126 HTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVAFASSSIA 182
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.011
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -2
Query: 199 SRGRELIDIFDELDLCILNTGSATTIQRPGFNSSAIDVTCVSPVLAPLCEWKVGDD 32
SRG ++D L L +LN G+ +T +S +DV+ SP L W+V D+
Sbjct: 145 SRGGVVMDAAAALGLVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDE 200
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 31.9 bits (69), Expect = 0.020
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = -2
Query: 196 RGRELIDIFDELDLCILNTGSATTIQRPGFNSSAIDVTCVSPVLAPLCEWKVGDDPHGSY 17
RG L+ F L++ ++N G T + SAID+T VS L W+V D S
Sbjct: 143 RGDTLLAAFAGLEMVLMNNGQDTFVTPE--RKSAIDLTFVSQSLMETTGWEVLPDYMNSD 200
Query: 16 H 14
H
Sbjct: 201 H 201
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 353 IDKKYSSIQNYQNSILSGYSKYRYCSV 273
+D ++ + + L GYS++R CSV
Sbjct: 307 LDVSECAVNEFAKTSLPGYSRWRTCSV 333
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 457 LLNETWLKKSSPSVNITGYNYIGKNAQNEHGGVGILI 347
L+ WL+ S+ NI + N + HG VG I
Sbjct: 1385 LIVSCWLRGSNKQQNIENALSVNCNGKVVHGSVGFSI 1421
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 457 LLNETWLKKSSPSVNITGYNYIGKNAQNEHGGVGILI 347
L+ WL+ S+ NI + N + HG VG I
Sbjct: 1386 LIVSCWLRGSNKQQNIENALSVNCNGKVVHGSVGFSI 1422
>CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein
protein.
Length = 271
Score = 23.4 bits (48), Expect = 7.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 436 KKSSPSVNITGYNYIGKNAQNEHGGVGILIRNTLQYKT 323
K ++ S N GY ++GK G+L+ TLQ T
Sbjct: 159 KPNTASTNDAGYGWVGKLLSMLLHLAGLLLPITLQMLT 196
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 23.0 bits (47), Expect = 9.2
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 119 ETRLQFFSHRCYLCQP 72
ET +F ++CY C+P
Sbjct: 4 ETFCFYFRYKCYSCEP 19
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 347 KKYSSIQNYQNSILSGYSKYRYCSVDSIRTSSILCVYCP 231
+K+ + + + +LSG+ +R TSS C CP
Sbjct: 982 RKHGDVTFHLSQVLSGHGFFREHLCGMQLTSSPDCTRCP 1020
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,957
Number of Sequences: 2352
Number of extensions: 15253
Number of successful extensions: 39
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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