Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00745
(821 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 109 2e-24
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 72 4e-13
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 64 8e-11
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 64 8e-11
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 61 1e-09
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 61 1e-09
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 59 4e-09
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 59 4e-09
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 56 3e-08
At5g13650.2 68418.m01585 elongation factor family protein contai... 53 3e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 53 3e-07
At5g13650.1 68418.m01584 elongation factor family protein contai... 52 3e-07
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 43 3e-04
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 34 0.13
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 32 0.40
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 32 0.40
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 32 0.40
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 32 0.40
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 32 0.53
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 32 0.53
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 31 0.92
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 30 1.6
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 30 1.6
At2g27035.1 68415.m03248 plastocyanin-like domain-containing pro... 30 1.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.6
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 2.1
At1g66310.1 68414.m07530 F-box family protein contains F-box dom... 30 2.1
At5g27240.1 68418.m03249 DNAJ heat shock N-terminal domain-conta... 29 2.8
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 2.8
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 3.7
At1g75800.1 68414.m08805 pathogenesis-related thaumatin family p... 29 3.7
At4g05632.1 68417.m00875 hypothetical protein 29 4.9
At1g66300.1 68414.m07529 F-box family protein contains F-box dom... 29 4.9
At3g06620.1 68416.m00769 protein kinase family protein contains ... 28 6.5
At3g59300.1 68416.m06610 expressed protein hypothetical protein ... 28 8.6
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 28 8.6
At1g12080.2 68414.m01397 expressed protein 28 8.6
At1g12080.1 68414.m01396 expressed protein 28 8.6
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 109 bits (263), Expect = 2e-24
Identities = 54/84 (64%), Positives = 67/84 (79%)
Frame = +1
Query: 259 ITIKSTAISMFFELEEKD*VFITNPDQREKSEKDFLINLIDSPGHVDFSSEVTAALRVTD 438
ITIKST IS+++E+ ++ T + ++LINLIDSPGHVDFSSEVTAALR+TD
Sbjct: 68 ITIKSTGISLYYEMTDESLKSFTGA----RDGNEYLINLIDSPGHVDFSSEVTAALRITD 123
Query: 439 GALVVVECMSGVCVQTETVLRQAM 510
GALVVV+C+ GVCVQTETVLRQA+
Sbjct: 124 GALVVVDCIEGVCVQTETVLRQAL 147
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = +2
Query: 59 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 238
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 239 KDEQD 253
DE +
Sbjct: 61 ADEAE 65
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +3
Query: 516 RIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKG 695
RI+P+L +NKMDR YQTF R++EN NVI+ATY D +G+V+V P KG
Sbjct: 150 RIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDP--LLGDVQVYPEKG 207
Query: 696 SVGFGSGLHGWAFTLKQFSEMY 761
+V F +GLHGWAFTL F++MY
Sbjct: 208 TVAFSAGLHGWAFTLTNFAKMY 229
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/51 (62%), Positives = 42/51 (82%)
Frame = +1
Query: 355 KDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQA 507
KD+ +NLIDSPGH+DF SEV+ A R++DGALV+V+ + GV +QT VLRQA
Sbjct: 72 KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +2
Query: 107 RNIRNMSVIAHVDHGKSTLTDSLV--SKAGIIAGARAGETRFTDTRKDEQDLASPLNLRP 280
R +RN+ ++AHVDHGK+TL D L+ S G++ AG+ RF D +EQ A + ++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRA--ITMKS 64
Query: 281 SLCSSSLKRKIKYSSQTLTS 340
S S SLK K YS + S
Sbjct: 65 S--SISLKYK-DYSLNLIDS 81
Score = 36.3 bits (80), Expect = 0.025
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 24/106 (22%)
Frame = +3
Query: 516 RIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD----------GGPM 665
++ P L +NK+DR Y RIV VN I++ Y + P
Sbjct: 126 KLTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKYLSDVDSILASPS 185
Query: 666 GEVRVD--------------PSKGSVGFGSGLHGWAFTLKQFSEMY 761
GE+ + P KG+V F L GW F + +F+ Y
Sbjct: 186 GELSAESLELLEDDEEVTFQPQKGNVVFVCALDGWGFGIAEFANFY 231
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 343 EKSEKDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQAM 510
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+++V+ GV V TE +R A+
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAI 258
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +3
Query: 528 ILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGF 707
++ +NK+DR Y + +E +N I+ + G + +DP+ G+V F
Sbjct: 265 VVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISAASTTAGDLP--LIDPAAGNVCF 322
Query: 708 GSGLHGWAFTLKQFSEMY 761
SG GW+FTL+ F++MY
Sbjct: 323 ASGTAGWSFTLQSFAKMY 340
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 89 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQD 253
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQE 187
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 343 EKSEKDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQAM 510
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+++V+ GV V TE +R A+
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAI 258
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +3
Query: 528 ILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGF 707
++ +NK+DR Y + +E +N I+ + G + +DP+ G+V F
Sbjct: 265 VVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISAASTTAGDLP--LIDPAAGNVCF 322
Query: 708 GSGLHGWAFTLKQFSEMY 761
SG GW+FTL+ F++MY
Sbjct: 323 ASGTAGWSFTLQSFAKMY 340
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 89 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQD 253
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQE 187
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/56 (44%), Positives = 40/56 (71%)
Frame = +1
Query: 343 EKSEKDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQAM 510
+ K +L N++D+PG+V+FS E+TA+LR+ DGA+ +V+ GV V TE +R A+
Sbjct: 189 DSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAI 244
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +3
Query: 528 ILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGPMGEVRVDPSKGSVGF 707
++ +NK+DR Y + +E +N I+ + + + +DP+ G+V F
Sbjct: 251 VVVINKVDRLITELKLPPRDAYYKLRYTIEVINNHISAASTNAADLP--LIDPAAGNVCF 308
Query: 708 GSGLHGWAFTLKQFSEMY 761
SG GW+FTL+ F+ MY
Sbjct: 309 ASGTAGWSFTLQSFARMY 326
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 89 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQD 253
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQE 173
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +1
Query: 268 KSTAISMFFELEEKD*VFITNPDQREKSEKDFLINLIDSPGHVDFSSEVTAALRVTDGAL 447
+ TA + E E++ + IT+ +K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDKH-RINIIDTPGHVDFTLEVERALRVLDGAI 189
Query: 448 VVVECMSGVCVQTETVLRQA 507
+ + ++GV Q+ETV RQA
Sbjct: 190 CLFDSVAGVEPQSETVWRQA 209
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 107 RNIRNMSVIAHVDHGKSTLTDSLVSKAG 190
++ RN+ ++AH+D GK+T T+ ++ G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1
Query: 355 KDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQ 504
KD+ +N+ID+PGHVDF+ EV ALRV DGA++V+ + GV Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 95 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 196
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1
Query: 355 KDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQ 504
KD+ +N+ID+PGHVDF+ EV ALRV DGA++V+ + GV Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 95 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 196
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +1
Query: 259 ITIKSTAISMFFELEEKD*VFITNPDQREKSEKDFLINLIDSPGHVDFSSEVTAALRVTD 438
IT+K+ +MF+E + +D + +L+NLID+PGHVDFS EV+ +L
Sbjct: 112 ITVKAQTATMFYENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 439 GALVVVECMSGVCVQT 486
GAL+VV+ GV QT
Sbjct: 161 GALLVVDAAQGVQAQT 176
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +2
Query: 113 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDL 256
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D + E+ +
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLDKLQRERGI 112
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/68 (32%), Positives = 43/68 (63%)
Frame = +2
Query: 50 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 229
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 230 DTRKDEQD 253
D+ E++
Sbjct: 122 DSNDLERE 129
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +1
Query: 355 KDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQAM 510
K+ +N+ID+PGH DF EV L + DG L+VV+ + G QT VL++A+
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 195
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 361 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQT 486
F +NLID+PGHVDFS EV+ +L +GAL+VV+ GV QT
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQT 193
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +2
Query: 110 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDLASPLNLR 277
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++ + L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQ 139
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +1
Query: 355 KDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQAM 510
K+ +N+ID+PGH DF EV L + DG L+VV+ + G QT VL++A+
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 194
Score = 50.8 bits (116), Expect = 1e-06
Identities = 19/53 (35%), Positives = 37/53 (69%)
Frame = +2
Query: 95 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQD 253
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERE 128
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +2
Query: 65 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 244
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A + D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 245 EQDLASPLN 271
E+ +N
Sbjct: 123 ERARGITIN 131
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 376 IDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTE 489
+D PGH D+ + DGA++VV G QT+
Sbjct: 147 VDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTK 184
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 376 IDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQAMPXA 519
+D+PGH F + RVTD A++VV G+ QT + A A
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAA 604
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 122 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 223
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 95 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 190
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 95 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 190
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 95 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 190
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 95 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 190
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 373 LIDSPGHVDFSSEVTAALRVTDGALVVVECMSG 471
L+DSPGH DF + A D A++V++ G
Sbjct: 321 LLDSPGHKDFVPNMIAGATQADAAILVIDASVG 353
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 119 NMSVIAHVDHGKSTLTDSLVSKAGIIA 199
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 367 INLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQTETVLRQA 507
I +D+PGH FS VTD ++VV GV QT + A
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHA 316
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 122 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 214
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 31.1 bits (67), Expect = 0.92
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 376 IDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQT-ETVLRQAMPXASSLFC 534
+D PGH D+ + DG ++VV G QT E +L SL C
Sbjct: 135 VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQVGVPSLVC 188
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 119 NMSVIAHVDHGKSTLTDSL 175
N+ I HVDHGK+TLT ++
Sbjct: 69 NVGTIGHVDHGKTTLTAAI 87
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 527 RLDAXGIA*RSTVSVCTHTPDIHSTTTRAPSVTRSAAVTSEEKS 396
++D+ T S T PD ST T APSVT+ + + EK+
Sbjct: 372 KVDSEACQNHPTASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 527 RLDAXGIA*RSTVSVCTHTPDIHSTTTRAPSVTRSAAVTSEEKS 396
++D+ T S T PD ST T APSVT+ + + EK+
Sbjct: 633 KVDSEACQNHPTASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At2g27035.1 68415.m03248 plastocyanin-like domain-containing
protein low similarity to SP:P80728 Mavicyanin
{Cucurbita pepo}; contains Pfam profile PF02298:
Plastocyanin-like domain
Length = 163
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 715 PDPKPTEPLLGSTRTSPMGPPSSLYVAIMTLTFSTI 608
P P P+ P ++ T+P+ PP+++ AI+ F +
Sbjct: 126 PQPPPSAPTNFTSTTTPLIPPNAITAAILIFAFKAL 161
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 367 INLIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQT 486
I +ID+PGH F++ + + D A++VV+ M G+ QT
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQT 597
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 132 SPTSITASQPSRTRWFPRPVSLLVRE 209
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At1g66310.1 68414.m07530 F-box family protein contains F-box domain
Pfam:PF00646
Length = 442
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 622 LTSL*PHITMMVVPWVKCVSTLARALLVSGLVFMGGLS 735
LTSL P + ++V+ WVK + LA +L+SG + + L+
Sbjct: 161 LTSL-PCVKVIVLEWVKFANDLALEMLISGCLVLESLT 197
>At5g27240.1 68418.m03249 DNAJ heat shock N-terminal
domain-containing protein
Length = 1104
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -2
Query: 793 KLDKVNLEFVTYISENCLRVKAHP*RPDPKPTEPLLGSTRTSP 665
K K+ EFV E ++ A +P P+ TEP +G++++ P
Sbjct: 264 KNSKIETEFVRNDDEEKMKSAAKLHKPHPEVTEPEIGASKSVP 306
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 373 LIDSPGHVDFSSEVTAALRVTDGALVVVECMSGVCVQT 486
+ID+PGH F++ + + D A++VV+ M G+ QT
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQT 809
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 132 SPTSITASQPSRTRWFPRPVSLLVRE 209
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At1g75800.1 68414.m08805 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam
profile: PF00314 Thaumatin family
Length = 330
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 715 PDPKPTEPLLGSTRTSPMGPPSSLYVAIMT 626
PDPKPT P G++ T+P G S+ + + T
Sbjct: 262 PDPKPTTP-TGTSSTTPAGDSSTTWSPVDT 290
>At4g05632.1 68417.m00875 hypothetical protein
Length = 197
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 222 VSLTRVRTNKTLHHH*IYGHLYVLR-A*RERLSIHHK 329
VSL+R + L HH +Y HL LR + E SIH +
Sbjct: 62 VSLSRTKQGSALEHHKLYMHLTKLRQSVLEASSIHDR 98
>At1g66300.1 68414.m07529 F-box family protein contains F-box domain
Pfam:PF00646
Length = 456
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 637 PHITMMVVPWVKCVSTLARALLVSGLVFMGGLS--PSNN 747
P + ++V+ WVK + LA +L+SG + + L+ SNN
Sbjct: 175 PSVKVIVLDWVKFANDLALEMLISGCLVLKSLTLCRSNN 213
>At3g06620.1 68416.m00769 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 773
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = -1
Query: 572 LELKKSTVHFVHEQNRLDAXGIA*RSTVSVCTHTPDIHSTTTRAPSVTRSAAVTSEEKST 393
LEL++S H E +RL + + SV H P + APS +S A + S
Sbjct: 14 LELEESQEHLKQEMSRLKVSTELRQRSHSVSPHRPARRNIGEGAPSWRKSGAASFRNASP 73
Query: 392 CPGESIKLIKKSFSLFSRWSG 330
ES I+ S L S G
Sbjct: 74 LRKES--RIQNSMRLRSEVGG 92
>At3g59300.1 68416.m06610 expressed protein hypothetical protein
T2J13.20 - Arabidopsis thaliana, PIR:T46116
Length = 459
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = +2
Query: 137 HVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDLASPLNLRPSLCSSSLKRKIK 316
H + DSL + AGA+ RF + ++A+ + L S +RK+K
Sbjct: 389 HAEEANLISVDSLGMDVRVFAGAQVQTHRFPFKTRATTEMAAEKKIHQLLFPRSRRRKLK 448
Query: 317 YSSQTLTSVKR 349
++L R
Sbjct: 449 CHDESLKDAFR 459
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 497 STVSVCTHTPDIHSTTTRAPSVTRSAAVTSEEKS 396
ST T T I STT APS T+S AV + +
Sbjct: 87 STQPTSTTTSTISSTTLAAPSTTQSIAVPASNST 120
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 485 VCTHTPDIHSTTTRAPSVTRSAAVTSEEKST 393
V T TP + +A VT + AV EEK T
Sbjct: 85 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 115
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 485 VCTHTPDIHSTTTRAPSVTRSAAVTSEEKST 393
V T TP + +A VT + AV EEK T
Sbjct: 51 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,460,045
Number of Sequences: 28952
Number of extensions: 397339
Number of successful extensions: 1260
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1882599200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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