Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00743
(704 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 96 4e-21
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 41 2e-04
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 40 5e-04
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 37 0.002
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 35 0.013
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 34 0.023
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 33 0.053
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 32 0.070
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.16
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 31 0.16
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 31 0.16
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 30 0.28
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.28
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 29 0.86
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 29 0.86
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 28 1.5
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 2.0
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 27 2.6
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 3.5
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 3.5
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 27 3.5
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 25 8.0
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 25 8.0
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 8.0
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 96.3 bits (229), Expect = 4e-21
Identities = 48/103 (46%), Positives = 64/103 (62%)
Frame = +1
Query: 202 QADRRRPALQGYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 381
+A R +G C + E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F G
Sbjct: 63 RAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GY 121
Query: 382 VDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADA 510
++ + ++F SL FVY LD+ARTRLA DA
Sbjct: 122 KKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDA 164
Score = 67.7 bits (158), Expect = 2e-12
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +3
Query: 504 RCGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 662
+ K G+R+F+GL + K ++SDGL GLYRGFG SV GI++YR YFG YD
Sbjct: 165 KSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYD 217
Score = 53.6 bits (123), Expect = 3e-08
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 FAKDFLAGGISAAVSKTAVAPIERVKQLLQVQ-HVSKQIAADQRYKGIVDAF 250
F DF+ GG+SAAVSKTA APIERVK L+Q Q + + RYKGI + F
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78
Score = 31.9 bits (69), Expect = 0.092
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGM 677
+ G+G C + +G+I L+RG +V +A F F DK + M
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKM 118
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +2
Query: 98 FAKDFLAGGISAAVSKTAVAPIERVKQLLQVQHVSKQIAADQRYKGIVDAFVLSPRS 268
FA + +GG + A S V ++ + L S + ++++ G+VD + + RS
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRS 188
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 531 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
+++G +C +KI K + ++ LY GF ++ +++ A YFG K R L
Sbjct: 140 KYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSL 189
Score = 31.5 bits (68), Expect = 0.12
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 196 RQQADRRRPALQGYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 372
R Q + G CL+ I K +G +RG ++ P +AL FA D Y +++
Sbjct: 35 RMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
Score = 29.1 bits (62), Expect = 0.65
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 522 GQREFSGLGNCISKIFKSDGLIGLYRG 602
G+ +++G +C+ KI K++G LYRG
Sbjct: 41 GKSDYNGTFDCLKKIVKNEGPHRLYRG 67
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/28 (57%), Positives = 25/28 (89%)
Frame = +2
Query: 113 LAGGISAAVSKTAVAPIERVKQLLQVQH 196
L+GG++A VS+TAV+P+ER+K + QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXX 447
+GL+ F+RGN N +R FP A+ FA + KQ L K
Sbjct: 70 EGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRAL----KNRSHQNLENHERLLFGAIA 125
Query: 448 XTSLC-FVYPLDFARTRLAAD 507
+ C YPLD ARTRL+ +
Sbjct: 126 GAASCATTYPLDIARTRLSIE 146
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 528 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 662
+E++ L + + KI+ +GLIG +RG G + Y A F ++
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFN 98
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPD 686
+ + + I I+K++G+ G +RG+ ++ II + + Y+ ML D
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITWYTYETVSKMLHD 316
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 104 KDFLAGGISAAVSKTAVAPIERVKQLLQVQHVSKQIAADQRY 229
K +AGG + V+K+ VAP++RVK L Q H S + A R+
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH 60
Score = 34.7 bits (76), Expect = 0.013
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +1
Query: 232 GYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRY 411
G + ++ I GL ++G+ A + R FP + F ++ ++V + + +T R+
Sbjct: 61 GLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRF 120
Query: 412 FXXXXXXXXXXXXTSLCFVYPLDFARTRLA 501
S+ F YPL+ R RLA
Sbjct: 121 LSGSLAGTC-----SVFFTYPLELIRVRLA 145
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 582 LIGLYRGFGVSVQGIIIYRASYFGFYDKA 668
+ YRGF V++ GI Y F YD A
Sbjct: 184 ICNFYRGFSVTLTGIFPYAGMSFLAYDLA 212
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 34.7 bits (76), Expect = 0.013
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 510 GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKAR 671
G G G + + IF ++G+ GLYRG G + G + + YF Y+K +
Sbjct: 43 GGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCK 96
Score = 28.7 bits (61), Expect = 0.86
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 226 LQGYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 393
L G +R I +G+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 51 LGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 104 KDFLAGGISAAVSKTAVAPIERVKQLLQVQ 193
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
Score = 25.4 bits (53), Expect = 8.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 561 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPD 686
KI+K +GL YRG S+ G ++ F Y+ + L D
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDD 279
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.9 bits (74), Expect = 0.023
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 540 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 662
G+ + + ++KS+GL+GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 32.7 bits (71), Expect = 0.053
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 86 DPVAFAKDFLAGGISAAVSKTAVAPIERVKQLL 184
DP F++GGI+ VS+T AP++R+K +L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 29.1 bits (62), Expect = 0.65
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 522 GQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 662
GQ S + + +++KS G+ G YRG V + G+ Y A+ G ++
Sbjct: 264 GQHGKSIILSNAKELYKSVGIRGYYRGVLVGILGMFPYSATDLGTFE 310
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +2
Query: 110 FLAGGISAAVSKTAVAPIERVKQLLQVQHVSK 205
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 32.3 bits (70), Expect = 0.070
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 113 LAGGISAAVSKTAVAPIERVKQLLQVQHVSKQIAADQRYKGIVDA--FVLSPRSRVSFHS 286
++GG+S A++ + P++ VK LLQ + S I ++ KG +D F+ + SF
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 287 GV 292
G+
Sbjct: 268 GI 269
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKAR 671
F + +C K++GL GLYRG + + + R+ F YD +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 549 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPDPKNTPI 704
N IS + +S+GL G YRG+ + V + S++ Y++++ L N I
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDI 172
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 110 FLAGGISAAVSKTAVAPIERVKQLLQVQ-HVSKQIAADQRYKGIVDAFVLSPR 265
FL+GG++A + T P E +K Q+Q ++K + + YK + AF L R
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIAR 79
Score = 31.1 bits (67), Expect = 0.16
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 525 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
+R + +G S I + +G+ GL RG G + I GFY+ R L
Sbjct: 64 KRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNGCRLGFYEPIRRTL 115
Score = 29.1 bits (62), Expect = 0.65
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 549 NCISKIFKSDGLIGLYRGFGVSVQGI 626
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 30.3 bits (65), Expect = 0.28
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKAR 671
++ + + I I+K +G+ G +RGFGV+ + Y FY+ ++
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSK 186
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.28
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 47 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKQLLQ 187
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
Score = 28.7 bits (61), Expect = 0.86
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 495 SRRRCGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 626
+R + K GQ ++ +CI K + +G GLY+G S+ G+
Sbjct: 188 TRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGV 232
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 28.7 bits (61), Expect = 0.86
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 525 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY-DKARGML 680
Q G+ I I+K++G+ GLYRG V G+ Y+ F D RG L
Sbjct: 240 QHSSPGIMQTIMSIYKNNGIKGLYRG-AVPRMGLGAYQTFVMVFLADCVRGYL 291
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 28.7 bits (61), Expect = 0.86
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 89 PVAFAKDFLAGGISAAVSKTAVAPIERVKQLLQVQ 193
PV + +++G IS + V P+E V+ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 549 NCISKIFKSDGLIGLYRGFGVSVQGI 626
+C+ KI K++GL Y+G + + GI
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGI 85
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 95 AFAKDFLAGGISAAVSKTAVA-PIERVKQLLQVQ 193
+F KDFLA G+S V++ V P + VK LQ Q
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQ 48
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 555 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
+ +I+K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 540 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPDP 689
G G ++I+K G GL+ G GV + I + + YD + M P
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKIMCGFP 307
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 113 LAGGISAAVSKTAVAPIERVKQLLQVQHVS 202
LAGGIS+ + + +AP + +K +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
Score = 25.8 bits (54), Expect = 6.0
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 247 LRPIPKE----QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 369
LRP+ KE +G+ + WRGN + Y A F K K +
Sbjct: 51 LRPVFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHL 95
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -2
Query: 520 SPLPHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRR 374
SP+ R RD RS +RS R HR DY RS ++ + RR
Sbjct: 144 SPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 26.6 bits (56), Expect = 3.5
Identities = 24/67 (35%), Positives = 31/67 (46%)
Frame = -2
Query: 589 PIRPSDLKILLMQFPRPENSRWPSPLPHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRS 410
P + S+L I + P P + SP P RR +RS G RS+ R R Y S
Sbjct: 514 PSKSSNLSINIDIPPSPLQNTVISPQPTRRSRTPIRSLSG-RSSVASSRNSSRTRSY--S 570
Query: 409 NARTASS 389
N +ASS
Sbjct: 571 NVSSASS 577
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 26.6 bits (56), Expect = 3.5
Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = -2
Query: 532 SRWPSPLPHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNA---RTASSCQHRRGTPA 362
SR PSP R R Y R RS R R PD + + R + HR +P
Sbjct: 115 SRSPSPHEARSRSPYNDERSDRRSMSPRYRSRSRSPDGRSRSPDYDRRSPKRNHRSPSPV 174
Query: 361 CTCP 350
P
Sbjct: 175 SFAP 178
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.4 bits (53), Expect = 8.0
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -2
Query: 505 RRRDGYVRSRGGTRSTERWL-RRHHRRPD--YQRSNARTASSCQHRR 374
R R Y +R RS+ R R +HRR D Y RSN R +HRR
Sbjct: 325 RYRQYYNSNRDRKRSSSRSDDREYHRRSDGRYDRSNYR--DDYRHRR 369
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +3
Query: 528 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
+E+ +C KI DGL+ + G + +I+ F Y+K +L
Sbjct: 238 KEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEIL 288
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 217 RPALQGYRRCLRPIPKEQGLLSFWRGNFANV 309
R + GY+R L +P +G++ R +F N+
Sbjct: 1566 RTRITGYKRRLLGVPVSKGVIDTSRAHFTNM 1596
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,447,560
Number of Sequences: 5004
Number of extensions: 44083
Number of successful extensions: 205
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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