Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00743
(704 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 46 2e-05
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 42 4e-04
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.005
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.008
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.024
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.032
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.042
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 33 0.30
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.52
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 32 0.52
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 0.69
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 31 0.91
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.91
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.91
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 31 1.2
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 30 1.6
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 29 2.8
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 29 2.8
SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49) 29 3.7
SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71) 29 3.7
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 29 3.7
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 29 4.9
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 6.4
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 6.4
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 6.4
SB_6969| Best HMM Match : Astacin (HMM E-Value=0) 28 8.5
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 28 8.5
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 28 8.5
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 28 8.5
SB_11160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 81.4 bits (192), Expect = 7e-16
Identities = 49/104 (47%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +1
Query: 202 QADRRRPALQGYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 381
+A R +G C + +G LSFWRGN AN IRYFPTQALNFAFKD+ K +F
Sbjct: 45 KAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF--- 101
Query: 382 VDKKTQFWRY-FXXXXXXXXXXXXTSLCFVYPLDFARTRLAADA 510
KKT F SL FVY LD+ RTRLA DA
Sbjct: 102 KPKKTDSNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDA 145
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +3
Query: 504 RCGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
+ GK G+R+F+G+ + K SDGL+GLYRGF +S GII+YR YFG YD + +L
Sbjct: 146 KVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKPIL 204
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 98 FAKDFLAGGISAAVSKTAVAPIERVKQLLQVQ-HVSKQIAADQRYKGIVDAFVLSPRSR- 271
F ++F G +A +SKTA APIERVK L+Q Q + K D YKG++D + RS
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 272 -VSFHSG 289
+SF G
Sbjct: 69 FLSFWRG 75
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPDPKNT 698
+ G+ +C S+ ++S+G + +RG + +A F F D+ + + PK T
Sbjct: 53 YKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF-KPKKT 106
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 202 QADRRRPALQGYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 366
Q + P +G L I KE+G+L +++GN NVIR FP A+ FA ++YK+
Sbjct: 63 QIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 104 KDFLAGGISAAVSKTAVAPIERVKQLLQVQ 193
K LAGGI+ AVS+T+V+P+ERVK LLQ+Q
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ 65
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 71 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKQLLQVQ-HVSKQIAADQRYKGIVDA 247
MS + F ++F G +A +SKTA APIERVK L+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 248 FVLSPRS 268
+ + R+
Sbjct: 61 TMRTYRA 67
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 531 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDK-ARGMLP 683
++SG+G ++KI++ +GL G ++G G ++ I+ Y A F Y++ +G+ P
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGIAP 641
Score = 34.3 bits (75), Expect = 0.098
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +1
Query: 247 LRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 366
L I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 598 LAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/61 (21%), Positives = 30/61 (49%)
Frame = +3
Query: 498 RRRCGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGM 677
R + +G+G ++S + I +S+G IGL++G ++ + F Y+ ++
Sbjct: 708 RMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQFAVYEVSKSA 767
Query: 678 L 680
+
Sbjct: 768 M 768
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = +1
Query: 262 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXX 441
+E G+ S WRGN ANVI+ P + F +K K+ L G D K
Sbjct: 185 REGGIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVGSDTKALGVTDRLLAGSMAGV 242
Query: 442 XXXTSLCFVYPLDFARTRLA 501
TS +YPL+ +TRLA
Sbjct: 243 ASQTS---IYPLEVLKTRLA 259
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 119 GGISAAVSKTAVAPIERVKQLLQVQ 193
GG A VS+TA AP++R+K LLQVQ
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ 167
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 531 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 662
++ GL + S I++ +G+ YRG S+ GII Y Y+
Sbjct: 265 QYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYE 308
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 531 EFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
+FSG+ + K++G+ L++G G ++ G+ RA YF Y K + ML
Sbjct: 773 KFSGIVPYARYMVKNEGIQSLFKGLGTTLLGVTPSRAIYFAIYSKLKDML 822
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 477 RLRTYPSRRRCGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGII-IYRASYFG 653
RL+T P R + G+ + F+G +C K +++G GLY+G + G+ I+ ++G
Sbjct: 53 RLQTMP-RPKPGE---KPMFTGTFDCAMKTIRNEGFFGLYKGMAAPITGVTPIFAICFWG 108
Query: 654 FYDKARGMLPDPKNTP 701
F + + DP P
Sbjct: 109 FNMGKKLQMKDPNADP 124
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 525 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY 659
Q ++G +C+ K+F S+GL G +RG ++ I A YFG +
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSF 338
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFG 653
++G+ +C +I K + ++GLY+G + G+ + A FG
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASPLAGLGLINAIIFG 230
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 232 GYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQA 333
GY C++ I G+ +F +G A ++R FPT A
Sbjct: 402 GYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.9 bits (79), Expect = 0.032
Identities = 25/90 (27%), Positives = 40/90 (44%)
Frame = +1
Query: 250 RPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 429
R I + +GLL++++GN A ++R FP A+ F + Y +V Q
Sbjct: 18 RAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKVL--------QTSSPAINKLV 69
Query: 430 XXXXXXXTSLCFVYPLDFARTRLAADAVRE 519
T+ YPLD R+RLA ++
Sbjct: 70 AGSLAGMTACACTYPLDMVRSRLAFQVAQD 99
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 549 NCISKIFKSDGLI-GLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
N + ++K DG+ GLYRG ++ + A FG Y+ + L
Sbjct: 217 NTLVNVYKDDGIRRGLYRGLSINYLRVCPQVAIMFGVYEVTKQFL 261
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +2
Query: 110 FLAGGISAAVSKTAVAPIERVKQLLQV 190
F+ GG++ AVS+T P++ V++ +Q+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQL 202
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 223 ALQGYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFA 345
A G R + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 93 AKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 113 LAGGISAAVSKTAVAPIERVKQLLQVQHVSKQIAADQRYKGIVDAF--VLSPRSRVSFHS 286
LAG S ++ V P E +K L VQHV+K ++ YKG+ A +L ++ +
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEGILALYK 213
Query: 287 GV 292
GV
Sbjct: 214 GV 215
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 92 VAFAKDFLAGGISAAVSKTAVAPIERVKQLLQV 190
+ + + FL GG SA ++++ +P+E VK L QV
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV 88
Score = 31.1 bits (67), Expect = 0.91
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 540 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPDPKN 695
GL + ++K +G+ ++G GVS + Y A + +++ L DP N
Sbjct: 96 GLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYAAFNRIVASLEDPHN 147
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +1
Query: 169 CQAAAPSTARQQADRRRPALQGYRRCLRPIPKEQGLLSFWRGNFANVIRYFP 324
C+ Q ++ +G R L+ I +E+G+L+ ++G + + FP
Sbjct: 173 CEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLGLFP 224
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 256 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 369
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 68 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKQLLQVQ---HVSKQIAADQRYKGI 238
K+ N P + G +S +SK + P + +K+ +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 239 VDAF 250
D F
Sbjct: 79 KDCF 82
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 32.7 bits (71), Expect = 0.30
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Frame = +1
Query: 187 STARQQADRRRPALQ--GYRR---CLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFK 351
S R +D R P Q GY L + KE+G+L+ WRG +R A A
Sbjct: 17 SLIRMTSDGRLPPEQRRGYTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATY 76
Query: 352 DKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRL 498
+ KQ+ L + +F S+ P+D A+TR+
Sbjct: 77 SQAKQLLLSTKYFEDNIVCHFGASMISGLATTVASM----PVDIAKTRI 121
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = +3
Query: 519 DGQREFSGLGNCISKIFKSDGLIGLYRGF 605
DG+ E+ G + +++I +++G+ L++GF
Sbjct: 128 DGKPEYKGTMDVLARIVRNEGVFALWKGF 156
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 256 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 369
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
+ G+ +C + +FK +G+ YR + + I ++ +F Y+ AR L
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKAL 80
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 229 QGYRRCLRPIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 396
+G C + KE+G+ +F+R + P Q L+F + ++ LGG D KT
Sbjct: 33 RGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 31.9 bits (69), Expect = 0.52
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFG 608
+ GLG+C+ +++++ GL G+++G G
Sbjct: 200 YQGLGDCLLQVYRTGGLRGVFKGLG 224
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 155 APIERVKQLLQVQHVSKQIAADQRYKGIVDAFV 253
AP ERVK LLQVQ K+ RY+G+ D +
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLL 208
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 256 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 405
IP+ +GL S WRG ++ P + F D+ K + G + +T W
Sbjct: 70 IPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 31.5 bits (68), Expect = 0.69
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 549 NCISKIFKSDGLIGLYRGFGVSVQGIIIY 635
+C I++ +G+ G YRGFG + ++Y
Sbjct: 332 DCFRTIYQQEGIFGFYRGFGALLIQCVVY 360
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPD 686
+ G +C+ K K G++GLYRG + G + + F ++ + + D
Sbjct: 79 YRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASVRFAVFEYLKNKMAD 129
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 519 DGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPD 686
+ ++ + +C K+ +++G IGLYRG + G+ +A D RG+ D
Sbjct: 949 EAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEKAIKLTTNDFVRGIFSD 1004
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 662
+ G +C+ K+++S GL G ++G V+ I A YFG Y+
Sbjct: 75 YRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAVYFGVYE 117
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 31.1 bits (67), Expect = 0.91
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 86 DPVAFAKDFLAGGISAAVSKTAVAPIERVKQLLQVQHVSKQIAA 217
DP K F + GI+A++++ A PI+ K LQ+Q S +A+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMAS 53
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/51 (21%), Positives = 26/51 (50%)
Frame = +3
Query: 534 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGMLPD 686
+ G+ + +FK++G+ +Y+G + + + + G YD+ + M D
Sbjct: 66 YRGMLGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMYGD 116
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 132 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWG 1
A++PP R +A + + FD+ + I TR RGG ++ WG
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWG 580
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -2
Query: 547 PRPENSRWPSPLPHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGT 368
PR + R+ S HR+ + RSR R R+ R R +SSC+ RR
Sbjct: 263 PR-SSKRYRSSRSHRKHRSHSRSRSPRSKRSRSPRKRRRSKSRSPRRYRDSSSCRRRRSR 321
Query: 367 PACTCP 350
P
Sbjct: 322 SRSRSP 327
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 132 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWG 1
A++PP R +A + FD+ + I TR RGG ++ WG
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWG 1307
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 104 KDFLAGGISAAVSKTAVAPIERVKQLLQVQ 193
+ FLAGG ++ V +T P++ + Q L +Q
Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ 136
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 508 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 386
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 122 GISAAVSKTAVAPIERVKQLLQVQH 196
G+S +KT AP+ER+K L Q Q+
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN 87
>SB_43929| Best HMM Match : TLE_N (HMM E-Value=0.49)
Length = 351
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 501 RRCGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
++ +G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D+ R ++
Sbjct: 100 KKLREGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVI 154
>SB_3306| Best HMM Match : DUF837 (HMM E-Value=0.71)
Length = 238
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 501 RRCGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDKARGML 680
++ +G+ +E +GLG+ + + S G IGL G VQ +I+ + + G D+ R ++
Sbjct: 51 KKLREGEMPKEATGLGDQVRSVIMSKGAIGL----GDQVQSVIMSKRA-IGLGDQVRSVI 105
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 522 GQREFSGLGNCISKIFKSDGLIGLYRG 602
G+ ++G+ +C KI+ ++GL Y+G
Sbjct: 241 GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -2
Query: 538 ENSRWPSPLPHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPAC 359
E R PS P RRR+ RS +R PD++ N T Q R TPA
Sbjct: 147 ERRRSPSRSPERRRE---------RSFSNSPKRERHSPDHRNGNEGTRDRSQSRSPTPAK 197
Query: 358 TCP 350
P
Sbjct: 198 ADP 200
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 631 MMIPCTDTPKPLYRPIRPSDLKILLMQ 551
+++PC P LYR +RP L+I + Q
Sbjct: 587 IILPCPSDPCSLYRELRPQALQIQMSQ 613
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 259 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 375
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 256 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 372
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 256 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 369
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 505 RRRDGYVRSRGGTRSTERWLRRHHR-RPDYQRSNARTASSCQHRRGTP 365
R+ + R +GG R+T+ ++H R +PD +R+ R R+GTP
Sbjct: 865 RKVEERARHKGGNRATQEREKKHRRNQPDKRRTQMRIP-----RKGTP 907
>SB_6969| Best HMM Match : Astacin (HMM E-Value=0)
Length = 225
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 540 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY-FGFY 659
G C S + + G+ + GFG QG++++ + GFY
Sbjct: 88 GFSKCWSYVGRIGGMQKISIGFGCFTQGVVVHEIGHALGFY 128
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 116 AGGISAAVSKTAVAPIERVKQLLQ 187
AGG++ S+T AP+E++K + Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 513 KGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVS 614
K G + G +C+ +I++ G+ G+Y+G V+
Sbjct: 169 KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 528 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 662
+++ + N K DG+ GL RG+ + G + FGFY+
Sbjct: 88 KKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLGKFGFYE 132
>SB_11160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/64 (31%), Positives = 25/64 (39%)
Frame = -2
Query: 610 TPKPLYRPIRPSDLKILLMQFPRPENSRWPSPLPHRRRDGYVRSRGGTRSTERWLRRHHR 431
+P P R IRP L + R WP H RD + STE +R H
Sbjct: 80 SPPPAMR-IRPFYLPPHRYDYQRLSPVYWPGLYHHPWRDRIAATSPRCNSTEDDSKRKHT 138
Query: 430 RPDY 419
RP +
Sbjct: 139 RPTF 142
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,942,054
Number of Sequences: 59808
Number of extensions: 393529
Number of successful extensions: 1372
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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