Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00742
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9V9M6 Cluster: CG3278-PA, isoform A; n=4; Sophophora|R...    34   3.1  
UniRef50_Q5CUM8 Cluster: Type I fatty acid synthase; n=4; Crypto...    33   9.4  
UniRef50_A5K6D1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_Q9V9M6 Cluster: CG3278-PA, isoform A; n=4; Sophophora|Rep:
           CG3278-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 611

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
 Frame = -3

Query: 258 TL*LYNHVCCRNIPKTEASMTLHL---LNYILFLIYKFFSFHC 139
           TL   + VC  N+PK+E S++  +   L+  LFL+YKFF   C
Sbjct: 261 TLFEIDDVCAENVPKSEKSVSHPVGKTLDVCLFLLYKFFDGKC 303


>UniRef50_Q5CUM8 Cluster: Type I fatty acid synthase; n=4;
            Cryptosporidium|Rep: Type I fatty acid synthase -
            Cryptosporidium parvum Iowa II
          Length = 8243

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -1

Query: 554  ILKNFLNITDSLSQLISYN*STF**SIQTLPYKSIKHGFL 435
            +LKN  N+ D+  Q+I+ N ST+  S ++ P+ S KH  L
Sbjct: 1676 LLKNPYNVEDACDQIINSNGSTY--SRESFPWNSFKHSIL 1713


>UniRef50_A5K6D1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1762

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 531 YVQKVFENVLTLSIDESSSFKKFVKNTRDFVSVLIFFIHFVDFSYHV 671
           YV   F+   T  I+ S S    + N ++F+ V+ FFI+F    +H+
Sbjct: 603 YVLVKFKKWDTHQINPSGSITTILGNEKNFLGVIYFFIYFYKIHFHI 649


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,546,322
Number of Sequences: 1657284
Number of extensions: 11243735
Number of successful extensions: 22879
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22871
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)