Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00741
(662 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110650-1|AAI10651.1| 1938|Homo sapiens ATG2 autophagy related ... 89 1e-17
AB007864-1|BAA23700.1| 1956|Homo sapiens KIAA0404 protein. 89 1e-17
AK128275-1|BAC87363.1| 909|Homo sapiens protein ( Homo sapiens ... 77 7e-14
BC015016-1|AAH15016.3| 775|Homo sapiens C14orf103 protein protein. 56 9e-08
BC053596-1|AAH53596.1| 752|Homo sapiens ATG2A protein protein. 46 1e-04
AY998718-1|AAX93811.1| 93|Homo sapiens immunoglobulin heavy ch... 32 2.1
BC040272-1|AAH40272.1| 454|Homo sapiens IL16 protein protein. 30 6.4
AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16 p... 30 6.4
AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens ... 30 6.4
>BC110650-1|AAI10651.1| 1938|Homo sapiens ATG2 autophagy related 2
homolog A (S. cerevisiae) protein.
Length = 1938
Score = 89.0 bits (211), Expect = 1e-17
Identities = 38/73 (52%), Positives = 53/73 (72%)
Frame = +1
Query: 1 DVLDFPVPGYAPSTVLSELHVHVVDCAIDYRPLYLPIRTVVTLGNFSVSSNLIAATNTSC 180
DVLD PV GY P TV++ LH H+ C++DYRPLYLP+R ++T F++SSN+I T+T
Sbjct: 1094 DVLDDPVLGYLPPTVITILHTHLFSCSVDYRPLYLPVRVLITAETFTLSSNIIMDTSTFL 1153
Query: 181 LRFLAQECTLFLS 219
LRF+ + L+LS
Sbjct: 1154 LRFILDDSALYLS 1166
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 276 DVNKDYICVIDVGIFELSLRM-EDKTNNPNDYPQVDLSASNNMVTVHTCWDSASALCRLL 452
D+ +DY+CV+DV + EL ++ + T P +L SNN+V VH+C DS + L LL
Sbjct: 1175 DLRRDYVCVLDVDLLELVIKTWKGSTEGKLSQPLFELRCSNNVVHVHSCADSCALLVNLL 1234
Query: 453 TYVASDGDSQPP 488
YV S GD PP
Sbjct: 1235 QYVMSTGDLHPP 1246
>AB007864-1|BAA23700.1| 1956|Homo sapiens KIAA0404 protein.
Length = 1956
Score = 89.0 bits (211), Expect = 1e-17
Identities = 38/73 (52%), Positives = 53/73 (72%)
Frame = +1
Query: 1 DVLDFPVPGYAPSTVLSELHVHVVDCAIDYRPLYLPIRTVVTLGNFSVSSNLIAATNTSC 180
DVLD PV GY P TV++ LH H+ C++DYRPLYLP+R ++T F++SSN+I T+T
Sbjct: 1112 DVLDDPVLGYLPPTVITILHTHLFSCSVDYRPLYLPVRVLITAETFTLSSNIIMDTSTFL 1171
Query: 181 LRFLAQECTLFLS 219
LRF+ + L+LS
Sbjct: 1172 LRFILDDSALYLS 1184
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 276 DVNKDYICVIDVGIFELSLRM-EDKTNNPNDYPQVDLSASNNMVTVHTCWDSASALCRLL 452
D+ +DY+CV+DV + EL ++ + T P +L SNN+V VH+C DS + L LL
Sbjct: 1193 DLRRDYVCVLDVDLLELVIKTWKGSTEGKLSQPLFELRCSNNVVHVHSCADSCALLVNLL 1252
Query: 453 TYVASDGDSQPP 488
YV S GD PP
Sbjct: 1253 QYVMSTGDLHPP 1264
>AK128275-1|BAC87363.1| 909|Homo sapiens protein ( Homo sapiens
cDNA FLJ46412 fis, clone THYMU3011534. ).
Length = 909
Score = 76.6 bits (180), Expect = 7e-14
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = +1
Query: 1 DVLDFPVPGYAPSTVLSELHVHVVDCAIDYRPLYLPIRTVVTLGNFSVSSNLIAATNTSC 180
++ D PV GY P T + HVH+ CA+DYRPLYLPIR+++T+ FSVSS++ ++S
Sbjct: 51 NIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLYLPIRSLLTVETFSVSSSVALDKSSST 110
Query: 181 LRFLAQECTLFLS 219
LR + E L LS
Sbjct: 111 LRIILDEAALHLS 123
Score = 57.6 bits (133), Expect = 4e-08
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +3
Query: 276 DVNKDYICVIDVGIFELSLR-MEDKTNNPNDYPQVDLSASNNMVTVHTCWDSASALCRLL 452
++++DY+ V+D+G+ EL++ ++ ++ P+ +L S+++V + TC DS +AL L+
Sbjct: 132 NLSRDYVRVMDMGLLELTITAVKSDSDGEQTEPRFELHCSSDVVHIRTCSDSCAALMNLI 191
Query: 453 TYVASDGDSQPPYDASSR 506
Y+AS GD Q P A +
Sbjct: 192 QYIASYGDLQTPNKADMK 209
>BC015016-1|AAH15016.3| 775|Homo sapiens C14orf103 protein protein.
Length = 775
Score = 56.4 bits (130), Expect = 9e-08
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 285 KDYICVIDVGIFELSLR-MEDKTNNPNDYPQVDLSASNNMVTVHTCWDSASALCRLLTYV 461
+DY+ V+D+G+ EL++ ++ ++ P+ +L S+++V + TC DS +AL L+ Y+
Sbjct: 1 RDYVRVMDMGLLELTITAVKSDSDGEQTEPRFELHCSSDVVHIRTCSDSCAALMNLIQYI 60
Query: 462 ASDGDSQPPYDASSR 506
AS GD Q P A +
Sbjct: 61 ASYGDLQTPNKADMK 75
>BC053596-1|AAH53596.1| 752|Homo sapiens ATG2A protein protein.
Length = 752
Score = 46.0 bits (104), Expect = 1e-04
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 369 PQVDLSASNNMVTVHTCWDSASALCRLLTYVASDGDSQPP 488
P +L SNN+V VH+C DS + L LL YV S GD PP
Sbjct: 19 PLFELRCSNNVVHVHSCADSCALLVNLLQYVMSTGDLHPP 58
>AY998718-1|AAX93811.1| 93|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 93
Score = 31.9 bits (69), Expect = 2.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 342 DKTNNPNDYPQVDLSASNNMVTVHTCWDSASALCRLLTYVASDGDSQPPYD 494
D +P+ QV +SA ++ T + W S A + Y A DS P+D
Sbjct: 35 DTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARQDDSTSPFD 85
>BC040272-1|AAH40272.1| 454|Homo sapiens IL16 protein protein.
Length = 454
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 213 SVLLAQH*TEHDRSQDDDKQPDVNKDYICVIDVGIFELSLRMEDKTN-NPNDYPQVDLSA 389
S++L T D S D+K PD + + GIF S+++ D + P+ P DL+
Sbjct: 22 SLMLCNAKTSDDGSSPDEKYPDPFEISLAQGKEGIFHSSVQLADTSEAGPSSVP--DLAL 79
Query: 390 SNNMVTVHTCWDSASALCRLLTYV 461
++ + + CR + ++
Sbjct: 80 ASEAAQLQAAGNDRGKTCRRIFFM 103
>AY324389-1|AAQ86961.1| 1332|Homo sapiens neural interleukin 16
precursor protein protein.
Length = 1332
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 213 SVLLAQH*TEHDRSQDDDKQPDVNKDYICVIDVGIFELSLRMEDKTN-NPNDYPQVDLSA 389
S++L T D S D+K PD + + GIF S+++ D + P+ P DL+
Sbjct: 22 SLMLCNAKTSDDGSSPDEKYPDPFEISLAQGKEGIFHSSVQLADTSEAGPSSVP--DLAL 79
Query: 390 SNNMVTVHTCWDSASALCRLLTYV 461
++ + + CR + ++
Sbjct: 80 ASEAAQLQAAGNDRGKTCRRIFFM 103
>AK131530-1|BAD18668.1| 1331|Homo sapiens protein ( Homo sapiens
cDNA FLJ16759 fis, clone BRACE3046450, highly similar
to Interleukin-16 precursor. ).
Length = 1331
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 213 SVLLAQH*TEHDRSQDDDKQPDVNKDYICVIDVGIFELSLRMEDKTN-NPNDYPQVDLSA 389
S++L T D S D+K PD + + GIF S+++ D + P+ P DL+
Sbjct: 22 SLMLCNAKTSDDGSSPDEKYPDPFEISLAQGKEGIFHSSVQLADTSEAGPSSVP--DLAL 79
Query: 390 SNNMVTVHTCWDSASALCRLLTYV 461
++ + + CR + ++
Sbjct: 80 ASEAAQLQAAGNDRGKTCRRIFFM 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,078,498
Number of Sequences: 237096
Number of extensions: 2086994
Number of successful extensions: 4825
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4821
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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