Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00739
         (705 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKF6 Cluster: Putative uncharacterized protein; n=1; ...    37   0.42 
UniRef50_Q18AI3 Cluster: Putative membrane protein; n=2; Clostri...    33   5.2  
UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n...    33   6.8  
UniRef50_Q5DBE9 Cluster: SJCHGC01974 protein; n=2; Eukaryota|Rep...    33   9.0  

>UniRef50_Q8IKF6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2558

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = -2

Query: 494  RLIELSNGMMHKYIEWSYKAISAELFF*YFMYTYHKYYRSGFICKDDYNNKDHQMEIYCF 315
            RL+ L +G+ + Y +   K +S +  F YF      Y   G +C D+Y     Q  + CF
Sbjct: 1144 RLMILCSGITYVYKDNKQKIVSTDEVFVYFFSQKKWYLLKGKLCNDEYLYNGRQRHVGCF 1203

Query: 314  ITIRFYLSFLANNSLSTTF 258
               +  L     N +   F
Sbjct: 1204 FESKNVLGRANRNPVPCVF 1222


>UniRef50_Q18AI3 Cluster: Putative membrane protein; n=2;
           Clostridium difficile|Rep: Putative membrane protein -
           Clostridium difficile (strain 630)
          Length = 412

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
 Frame = -3

Query: 529 TKHIIM*YSLIYD**NYPME*-CTSILNGPTRLYQLNYFFNILCIP-ITNIIGQDLFVKM 356
           +KHI+  +S I     YP+   CTSI N  T  +   Y F ++C+  IT+ +   L    
Sbjct: 72  SKHIL--FSAIISIFAYPIYLFCTSIANPGTTDFNSAYGFGLICLQIITSAMSITLVFNH 129

Query: 355 ITTIKIIRWKFIVLSPLGFIFHF*QI 278
           I  IK+ R   I+L+ +  IF F Q+
Sbjct: 130 IKKIKMQRLTLILLTMI-MIFSFPQL 154


>UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBFC45 UniRef100 entry -
           Rattus norvegicus
          Length = 272

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +2

Query: 470 FHWIVLSIVY**ILHNNMFGCLYQFILMFIGYICNYISVQICMYWFMVFL*RCDVVVFLV 649
           + ++V+ +    ++H  M+ C+Y  I+    Y+C Y+ + +C+Y +M      DV +  V
Sbjct: 43  YMYVVMCLYICLLMHVYMYMCMY--IVYLCVYVCIYVYIFMCVYLYMYVHVYVDVFL-CV 99

Query: 650 GLSLFM 667
            L +FM
Sbjct: 100 HLCIFM 105


>UniRef50_Q5DBE9 Cluster: SJCHGC01974 protein; n=2; Eukaryota|Rep:
           SJCHGC01974 protein - Schistosoma japonicum (Blood
           fluke)
          Length = 138

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +1

Query: 454 IYLCIIPLDSSINRILMNTT**YVWLFIPIYFNVYWIYM*LYKCTDMYVLVY 609
           IY+C I +   I   +      Y++++I IY  +Y IY+ +Y C  MY+ +Y
Sbjct: 57  IYICYIYIYMYIYIYIYIYISIYIYIYIYIYVYIY-IYIYIYICIYMYIYIY 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,616,369
Number of Sequences: 1657284
Number of extensions: 11885154
Number of successful extensions: 21871
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21831
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)