Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00739
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   1.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   7.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.8  

>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -3

Query: 382 IGQDLFV-KMITTIKIIRWKFIVLSPLGFI 296
           +   LFV   I  I + RW  I LS LGF+
Sbjct: 3   VDMQLFVLSPIILIPLFRWPKIGLSALGFL 32


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 397 PITNIIGQDLFVKMITTIKIIRW 329
           P+T+I  Q+L +K  T   +I+W
Sbjct: 162 PVTHIFLQNLILKENTYDAVIKW 184


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 74  Y*LVSLQIIICYQTINKITELK 139
           Y L+++   +C+QTI  +  LK
Sbjct: 444 YILLAMNSAVCHQTIELVKMLK 465


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 74  Y*LVSLQIIICYQTINKITELK 139
           Y L+++   +C+QTI  +  LK
Sbjct: 169 YILLAMNSAVCHQTIELVKMLK 190


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 457 YLCIIPLDSSINRILMN 507
           YL +   DSS NRIL N
Sbjct: 398 YLALPKTDSSDNRILNN 414


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 457 YLCIIPLDSSINRILMN 507
           YL +   DSS NRIL N
Sbjct: 290 YLALPKTDSSDNRILNN 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,525
Number of Sequences: 336
Number of extensions: 3791
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)