Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00739
         (705 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U23486-4|AAC46776.2|  261|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z68297-4|CAB54220.1|  356|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z68106-2|CAA92126.2|  402|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine re...    28   5.7  
AC024882-12|AAF60928.2|  347|Caenorhabditis elegans Seven tm rec...    27   9.9  

>Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical
           protein T09F5.16 protein.
          Length = 311

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -2

Query: 518 YYVVFINIRLI--ELSNGMMHKYIEWSYKAISAELFF*YFMYTYHKY 384
           ++V  I + LI   L  G+MH   E+    +S + F  YFM  Y KY
Sbjct: 82  FFVFLIPVLLIVFPLVTGLMHDVNEFLLGLLSIQRFCLYFMPNYEKY 128


>U23486-4|AAC46776.2|  261|Caenorhabditis elegans Hypothetical
           protein F07F6.2 protein.
          Length = 261

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 105 VIKLSIKLRN*KTTIGRE*VQLPKSLLFSFYIKIILL--RNYLLCSEIC 245
           +I    ++RN K+   R+ + +    +F +Y++++LL  +N LL   IC
Sbjct: 97  IIHFGFEIRNAKSETSRKYIAISTREMFMYYVELLLLYFQNLLLLPYIC 145


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -2

Query: 407  FMYTYHKYYRSGFICKDD--YNNKDHQMEIYCFITIRF 300
            +M TY   YR  F    D   NN   + EI C +T+RF
Sbjct: 2422 YMQTYRNVYRMAFGVTGDSLVNNPLFESEIMCAMTLRF 2459


>Z68297-4|CAB54220.1|  356|Caenorhabditis elegans Hypothetical
           protein F11A10.6 protein.
          Length = 356

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/60 (23%), Positives = 26/60 (43%)
 Frame = +2

Query: 506 ILHNNMFGCLYQFILMFIGYICNYISVQICMYWFMVFL*RCDVVVFLVGLSLFMTHECID 685
           +L NN     +  +L  IGYI +Y+     + W   +     + ++ +  S F  H  +D
Sbjct: 20  VLRNNALPFRFLVVLRIIGYIISYLHFARLLLWLHPYQ-IASIELWRIATSTFCGHNVLD 78


>Z68106-2|CAA92126.2|  402|Caenorhabditis elegans Hypothetical
           protein F41E7.3 protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 597 IHICTLI*LHIYPINIKINWYKQP-NILLCS 508
           I +C+L+ +  Y IN+K+N+  +P + L+CS
Sbjct: 164 IWLCSLLLVTPYAINMKLNYIHEPCDFLICS 194


>AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine
           receptor, class v protein21 protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +3

Query: 327 FHLMIFIVVIIFTNKS*PIIFVIGIHKILKK*FS*YSLVGPFNILVHHS 473
           + L+IFI  +        ++FV+ + +     +   S +GPF IL+ ++
Sbjct: 248 YFLLIFITSLCSAGTIRDMVFVVAVRRNFPTAYGTLSFIGPFTILIFNN 296


>AC024882-12|AAF60928.2|  347|Caenorhabditis elegans Seven tm
           receptor protein 163 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 523 VWLFIPIYFNVYWIYM*LYKC 585
           VWLF+P++    W  + +Y C
Sbjct: 137 VWLFVPLFVGTVWTIVTVYFC 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,550,290
Number of Sequences: 27780
Number of extensions: 300393
Number of successful extensions: 554
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)