Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00738
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   1.8  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   3.2  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   5.6  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   9.8  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 250 RRDTREFDKYFNHGAESAMDQHQQYRYEQQ 339
           RR+  E DK  N   +SA   H Q + +Q+
Sbjct: 208 RREREEQDKMKNESLKSAQQHHSQKQAQQE 237


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 403 TSSRYSIPVPALVPDSKPADSIVARICTAGVDP 305
           T   Y++P   +VP     + + A +C  GV P
Sbjct: 481 TCEDYALPYQDVVPSDPSFEDMYAVVCVKGVRP 513


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 265 EFDKYFNHGAESAMDQHQQYRYEQQCYRPVYCPEQAP 375
           EF K  + G  S +   +  +YE+ C+  +  PE  P
Sbjct: 644 EFLKQHDIGRASFIALEKIQQYERNCHTQIQTPENVP 680


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 15/63 (23%), Positives = 25/63 (39%)
 Frame = +1

Query: 175 TSAESSTGGRIHESSFRNKDGISRLRRDTREFDKYFNHGAESAMDQHQQYRYEQQCYRPV 354
           T+    T  RIH  +    D   + +R    F   +++        H +    ++CYR  
Sbjct: 305 TTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSY------KMHAKTHEGEKCYRCE 358

Query: 355 YCP 363
           YCP
Sbjct: 359 YCP 361


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 318 AVQIRATMLSAGLLSGTSAGTGILY 392
           AV +   ML AG+ + +S  TG+LY
Sbjct: 315 AVIMSLDMLIAGIDTTSSGSTGVLY 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,236
Number of Sequences: 2352
Number of extensions: 12309
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)