Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00737
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 50 2e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 6e-05
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 39 0.003
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.003
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.016
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.022
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 34 0.088
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 33 0.27
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 32 0.47
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.82
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.1
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.4
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.9
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 30 1.9
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.5
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.3
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.3
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 3.3
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9) 29 4.4
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 4.4
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 5.8
SB_24091| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15) 28 7.6
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 28 7.6
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.6
SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16) 28 7.6
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AAVSKTAVAQIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 431
A +SKTA A IERVKLL+Q Q + K D YKG++D R + +G LSFWRGN AN
Sbjct: 20 AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79
Query: 432 VIRYFPTQALNFAFKDKYKQVF 497
IRYFPTQALNFAFKD+ K +F
Sbjct: 80 CIRYFPTQALNFAFKDQVKALF 101
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +3
Query: 348 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 500
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +2
Query: 578 SLCFVYPLDFARTRLAAD--VGKGDGQ 652
SL FVY LD+ RTRLA D VGK G+
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGE 153
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +3
Query: 258 AVSKTAVAQIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 437
AVS+T+V+ +ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 438 RYFPTQALNFAFKDKYKQ 491
R FP A+ FA ++YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 60.5 bits (140), Expect = 1e-09
Identities = 39/99 (39%), Positives = 58/99 (58%)
Frame = +3
Query: 252 LAAVSKTAVAQIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 431
LA VS+TA A ++R+K+LLQVQ A+ GIV F + +E G+ S WRGN AN
Sbjct: 146 LAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGAN 199
Query: 432 VIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGVTSLVI 548
VI+ P + F +K K++ +G T ++ GVT ++
Sbjct: 200 VIKIAPESGIKFFAYEKAKKL-VGSDT--KALGVTDRLL 235
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 306 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 485
L+V I +Y+G++ A I +++G+ SF+RG F +++ P ++ A +
Sbjct: 251 LEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETL 310
Query: 486 KQVFL 500
K +L
Sbjct: 311 KNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 255 AAVSKTAVAQIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 416
A +SKTA A IERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 21 AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 306 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 470
L+V V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 79 LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 252 LAAVSKTAVAQI-----ERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 416
LA S T +A + E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 213
Query: 417 GNFANVIRYFP 449
G + + FP
Sbjct: 214 GVTPSFLGLFP 224
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +3
Query: 348 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 491
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 333 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 497
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +3
Query: 258 AVSKTAVAQIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 437
A TAV I+ VK +Q Q + A++ YK +D F ++ + +G + +RG ++
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
Query: 438 RYFPTQALNFAFKDKYKQVF 497
P +A+ D + +F
Sbjct: 983 GVSPEKAIKLTTNDFVRGIF 1002
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Frame = +3
Query: 276 VAQIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 455
+A ++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 456 ALNFA----FKDKYKQVF--LGGVTRRRSSGVTSLVIW 551
A+ F D + +F G T + G +V W
Sbjct: 110 AVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSW 147
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 348 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 467
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 351 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 500
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 35.1 bits (77), Expect = 0.050
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 351 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV---FLGGVT 512
YKG +D RI + +G+ + W+G R P L F F ++ + F GG +
Sbjct: 133 YKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGGTS 189
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 360 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 494
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 363 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 488
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 34.3 bits (75), Expect = 0.088
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 261 VSKTAVAQIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 419
++ V E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 381 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 494
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = +2
Query: 188 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRR 367
RT+ R + R R + V+RRR DRR T A T R+Q DRRR Q R
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRRRTR------ARVTRRRQVDRRRTRAQVTSR 168
Query: 368 R 370
R
Sbjct: 169 R 169
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +2
Query: 188 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRR 367
RT+ R + R R + V+ RR DRR T A T R+Q DRRR + RR
Sbjct: 100 RTRARVTIRRQVDRRRTRARVTSRRQVDRRRTR------AQVTRRRQVDRRRTRARVTRR 153
Query: 368 R 370
R
Sbjct: 154 R 154
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = +2
Query: 188 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRAC---------QAAAPSTARQQADRR 340
RT+ R + R R + V+ RR DRR T + A T+R+Q DRR
Sbjct: 70 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTRARVTIRRQVDRRRTRARVTSRRQVDRR 129
Query: 341 RPALQGYRRR 370
R Q RRR
Sbjct: 130 RTRAQVTRRR 139
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +2
Query: 188 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRR 343
RT+ R + R R + V+ RR DRR T A T+R+Q DRRR
Sbjct: 55 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTR------ARVTSRRQVDRRR 100
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 188 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRR 367
RT+ + + R R + V+ RR DRR T A T+R+Q DRRR + R
Sbjct: 40 RTRAQVTSRRQVDQRRTRARVTSRRQVDRRRTR------ARVTSRRQVDRRRTRARVTSR 93
Query: 368 R 370
R
Sbjct: 94 R 94
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 279 AQIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 419
A ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 381 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSG 530
+P+E +L W G ++VI F A+N F+D+YK++ + R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 381 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGV 533
+P+E L + G ++VI F A+N F+++YK+VF R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 261 VSKTAVAQIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 419
+SK + + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 31.1 bits (67), Expect = 0.82
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 237 PGWRYLAAVSKTAVAQ-----IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 401
P WR+++ + VA ++ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 402 LSFWRGNFANVIRYFP 449
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 264 SKTAVAQIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 422
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 285 IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 458
++ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 378 VDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 357 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 494
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 254 EIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 123
++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 539 DLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 303 LLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 419
L++++ + +I YK + AF +I K++G L W G
Sbjct: 137 LVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTG 175
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 632 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 510
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 351 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGG 506
Y+G++ + KE+G+ +F+R + P Q L+F + ++ LGG
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGG 85
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +3
Query: 285 IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALN 464
++ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 41 LDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTALT 99
Query: 465 F 467
F
Sbjct: 100 F 100
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 381 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSG 530
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 254 EIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 123
++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1266 DLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 302 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 403
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 302 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 403
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9)
Length = 283
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 251 SRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRRRLRPHPQGAGSP 403
S+ + QD++ST++ QA +P ++QQA R+ Q ++ P +P
Sbjct: 124 SKPQDQDKQSTDQDKQATSPKISKQQAPRQASNKQQDKQATSPKTSKQQAP 174
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 302 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 403
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 384 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 500
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 302 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 403
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_24091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 282 QIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 431
Q+E VK LL+V+ SKQ + + R E LL+ W +FAN
Sbjct: 147 QLEAVKQLLEVKDYSKQYQLVEIITKNIFKIFRHSTEWELLAKWSVSFAN 196
>SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15)
Length = 1600
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 601 RLRTYPSRRRCR*GRWP 651
R+ T PSRR CR RWP
Sbjct: 1562 RVTTPPSRRGCRHSRWP 1578
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 264 SKTAVAQIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 443
+ AV ++ +K LQ+ + + + Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 444 FP 449
P
Sbjct: 276 AP 277
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 30 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 173
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)
Length = 494
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 230 RTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPAL 352
+T+ +AV L RRS +A P+T R+ + RP L
Sbjct: 337 KTAKIAVKTNNLLRRRSVAVTAPSAKPNTTRRMSTASRPTL 377
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 288 ERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 449
E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 128 ELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,042,103
Number of Sequences: 59808
Number of extensions: 422687
Number of successful extensions: 1421
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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