Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00736
(738 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 71 1e-12
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 60 1e-09
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 56 4e-08
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 47 2e-05
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 46 3e-05
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 45 6e-05
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 45 7e-05
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 44 2e-04
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 43 2e-04
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 41 0.001
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 40 0.002
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 40 0.002
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 40 0.003
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 39 0.004
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 38 0.006
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 38 0.008
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 38 0.011
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 38 0.011
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 37 0.015
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 37 0.015
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 37 0.020
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 36 0.026
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.026
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 36 0.034
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 36 0.045
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 35 0.060
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 35 0.079
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 35 0.079
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 35 0.079
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 35 0.079
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.079
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 33 0.32
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64) 31 1.3
SB_53270| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 30 1.7
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_58997| Best HMM Match : PC_rep (HMM E-Value=4e-16) 30 2.3
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 30 2.3
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_39416| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 29 3.0
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_44083| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_5071| Best HMM Match : RIO1 (HMM E-Value=0) 28 9.1
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = +3
Query: 255 TYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEED 434
TY + V+E + H +D R +EPKR+VPR+E PEA + +K+FV GL EED
Sbjct: 95 TYESSDSVNEVLKKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEED 154
Query: 435 LREYFST------FGNIVSVSVVTDKETGKK 509
++EYF++ G ++ V + D++ K+
Sbjct: 155 IKEYFNSLCRKNGMGEVIDVDLKRDRDNPKR 185
Score = 65.3 bits (152), Expect = 5e-11
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = +1
Query: 100 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
E E RK+FIGGL++ TT+ LK+++ QWG IVD V+MK + RS+GFGF+
Sbjct: 45 ESEKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMK--RDGRSRGFGFV 94
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +1
Query: 73 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQ------WGEIVDVVVMKD-PKTK 231
P + E TRK+F+GGL T + +KE++ GE++DV + +D K
Sbjct: 125 PRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPK 184
Query: 232 RSKGFGFI 255
R +GF F+
Sbjct: 185 RIRGFAFV 192
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +2
Query: 512 GFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISKTDM 631
GF FV FD+ + V++VC + H+I+ + +VKKA ++ M
Sbjct: 188 GFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQSAM 227
Score = 35.1 bits (77), Expect = 0.060
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 375 SATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVV 485
S ++K+F+ GL + EE L++YFS +G IV ++
Sbjct: 46 SEKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIM 82
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 61.7 bits (143), Expect = 6e-10
Identities = 24/46 (52%), Positives = 38/46 (82%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
KLF+GGL+ TT+ +L+E++E +GE+ DVVV+ D TK+S+GFG++
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYV 60
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 YTYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEE 431
Y ++ + D+ +N H+IDG+ VE KRA+PR++ T KK+FV GL +D +E
Sbjct: 65 YKVTRNVLKDKVENGA-HRIDGKEVEVKRAIPRDDNSATSHEKT-KKIFVGGLPEDATKE 122
Query: 432 DLREYFSTF--GNIVSVSVVTDKETGKK 509
D++E + + V ++ KE K
Sbjct: 123 DIQEAIESLLEEKVDKVDLIMKKEDETK 150
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 390 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
KLFV GL ++ E LREYF +G + V V+ D T K
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKK 53
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +1
Query: 106 EHTRKLFIGGLDYRTTDSSLKE----FYEQWGEIVDVVVMKDPKTKRSKGFGFIHI 261
E T+K+F+GGL T ++E E+ + VD+++ K+ +TK +GF F+ +
Sbjct: 105 EKTKKIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDETKH-RGFAFVEL 159
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 512 GFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKA 613
GF FVE ++ D D +C + +K + ++ KKA
Sbjct: 153 GFAFVELNNEDQADELCCVKKIHVKGKMVEAKKA 186
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 512 GFGFVEFDDYDPVDRVCLQQ----NHQIKDQHLDVKKAISKTD 628
GFG+V F DY V + H+I + ++VK+AI + D
Sbjct: 56 GFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDD 98
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
KLF+GG+ Y + D +L++F+ Q+GEI + VV+KD TK+SKG+GF+
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFV 56
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 390 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
KLFV G+ + ++ LR++F+ FG I V+ D+ T K
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKK 49
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
KLF+GGL Y TT SLKE++ ++GE+V V + D T R +GF F+
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFV 75
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 384 VKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
+ KLFV GL + +E L+EYFS +G +V V + D TG+
Sbjct: 28 IGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGR 68
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 303 HKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYF-STFGNIVSVS 479
H+ + ++PK A P I +P VKK+FV GLK + +E +REYF + + +
Sbjct: 79 HQSEADAIDPKPAAP---IGKPP-HLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIE 134
Query: 480 VVTDKETGKK 509
+T+ + ++
Sbjct: 135 YITEHSSNRR 144
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 512 GFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISK 622
GF FV FD D VD++C Q H I+ ++VK+A+ K
Sbjct: 146 GFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRALPK 182
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 100 EPEHTR--KLFIGGLDYRTTDSSLKEFY-EQWGEIVDVVVMKDPKTKRSKGFGFI 255
+P H R K+F+GGL T+D ++E++ + + + ++ + + + R +GF F+
Sbjct: 96 KPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFV 150
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 55.2 bits (127), Expect = 5e-08
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Frame = +3
Query: 198 RCSCNERPKNQEIKRIWIYTYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEAS 377
+C+ ER + + +K T+ ++ +PH +DG+ ++PK AVPR ++ +
Sbjct: 130 KCAWFER-RARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTG 188
Query: 378 ATVK----------KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKK 509
A + K+F+ GL EEDL+EYFST+G +V V +E G++
Sbjct: 189 AVMGGPQRGSANDGKVFIGGLAFGTTEEDLKEYFSTYG-MVEVKKAEYRERGQQ 241
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEI 195
K+FIGGL + TT+ LKE++ +G +
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILK 267
L + GL Y TT+S +KE++ ++GEI V DP T+RS+GFGF+ K
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKK 165
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 279 DEAQN--NRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFS 452
++A+N + H+I GR+ E + P+EE+ P KKLFV L + E+ L EYF+
Sbjct: 167 EDAKNVLSTSHRIQGRLCEVRLPRPKEELNVP------KKLFVGRLPESTTEKTLMEYFA 220
Query: 453 TFGNIVSVSV 482
FG + V +
Sbjct: 221 QFGEVTDVYI 230
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +1
Query: 97 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGF 246
EE +KLF+G L TT+ +L E++ Q+GE+ DV + PK R GF
Sbjct: 193 EELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 345 PREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKET 500
P +I + E V L V GL E +++EYF+ FG I V D T
Sbjct: 102 PETKITKVEG-VDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNT 152
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 204 SCNERPKNQEIKRIWIYTYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIKRPEASA 380
S + P+ + K ++ + + ++D N H ID + VE KRA+PR++ A
Sbjct: 43 SLAKTPEGKSRKFCFVEFSNGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDD-PNELAHV 101
Query: 381 TVKKLFVAGLKQDIEEEDLREYFSTFGNI--VSVSVVTDKETGK 506
KKLF+ GLK + EED++ + + + +V D+ET K
Sbjct: 102 RTKKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNK 145
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 390 KLFVAGLKQDIEEEDLREYFSTF--GNIVSVSVVTDKET 500
KLFV GL +D EE +R YF +F G+ VS V+ +T
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKT 47
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Frame = +1
Query: 61 LNMKPSESGDDYEEPEH--TRKLFIGGLDYRTTDSSLKEFYEQWGEI--VDVVVMKDPKT 228
+ +K + DD E H T+KLFIGGL ++ +K +++ +++D +T
Sbjct: 84 VEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRET 143
Query: 229 KRSKGFGFI-----HILKPIWLMK 285
+ KG+ F+ HI+ ++L++
Sbjct: 144 NKFKGYCFVNFPNEHIVDKLYLVR 167
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQW--GEIVDVVVMKDPKTKRSKGFGFIHI 261
KLF+GGL+ TT+ +++ +++ + G DV + KT K F +
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFV 58
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 76 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDP 222
S +D +P TR LF+G ++ TT LKE +E++GE++DV + K P
Sbjct: 236 SNYSEDEFDPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQP 284
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +1
Query: 163 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILKP 270
L++ +E++GE+ + VVM+DP TKRS+GFGF+ P
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDP 159
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 351 EEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNI 467
+E+ + T KK+F+ GL + EED+++YFS FG +
Sbjct: 171 QELDGKKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV 209
Score = 34.7 bits (76), Expect = 0.079
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +1
Query: 112 TRKLFIGGLDYRTTDSSLKEFYEQWGEI 195
T+K+FIGGL T++ +K+++ Q+G++
Sbjct: 182 TKKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 45.6 bits (103), Expect = 4e-05
Identities = 16/45 (35%), Positives = 32/45 (71%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
+++G L Y T+S L + +E++G++V V +++D +T+ S+G FI
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFI 56
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +3
Query: 387 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETG 503
+ +F+ L DIEEE LRE F+T GN+ SV ++ D++TG
Sbjct: 56 RSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTG 94
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 106 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
+H R +FIG L + + L+E + G + V +++D KT KGFG++
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYV 102
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 44.8 bits (101), Expect = 7e-05
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +1
Query: 97 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
++P +L++G L + T++ +K +E +G + V ++ D +T RSKG+GF+
Sbjct: 236 KQPLGPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFV 288
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 73 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 252
P ++ E + R +F L L+EF+ + G++ DV ++ D ++RSKG +
Sbjct: 132 PEPMTEESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAY 191
Query: 253 I 255
I
Sbjct: 192 I 192
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 88 DDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILK 267
D EE L+I GL TTD L ++G I+ + D T KG+GF+
Sbjct: 91 DTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFES 150
Query: 268 PIWLMKLKIIGLTK-LTEELSSQNEQ 342
PI K + K + +++ Q EQ
Sbjct: 151 PISAQKAVAALVNKGIQAQMAKQQEQ 176
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 369 EASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKET 500
E + L++ GLK + ++DL +G I+S + DK+T
Sbjct: 94 EEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDT 137
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 387 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK-KGALVL 524
+ LFV L +D +E D+ YF +G + V ++TD+ETGK KG V+
Sbjct: 319 RTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVV 365
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/50 (34%), Positives = 33/50 (66%)
Frame = +1
Query: 106 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
+++R +F+GGL T + LK+++EQ+GE+ V +M+ S+ +GF+
Sbjct: 77 KNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFV 125
Score = 35.5 bits (78), Expect = 0.045
Identities = 15/70 (21%), Positives = 36/70 (51%)
Frame = +1
Query: 61 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 240
L ++ + ++ ++ R LF+ L T + + ++ +G++ V ++ D +T +SK
Sbjct: 301 LKVRTVQLPNEEKQGVRERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSK 360
Query: 241 GFGFIHILKP 270
G G + + P
Sbjct: 361 GCGVVKLRHP 370
Score = 34.7 bits (76), Expect = 0.079
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +1
Query: 112 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILKPIWLM--- 282
++KL + LD+ TT L+E++E+ GE+ + ++ + + + F LK I +
Sbjct: 235 SKKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRTCAAIVFFRNLKDIKKVVEE 294
Query: 283 KLKIIGLTKLTEELSSQNEQFQGKR 357
I GL T +L NE+ QG R
Sbjct: 295 NHTIKGLKVRTVQL--PNEEKQGVR 317
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 387 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVV 485
+ +FV GL +EE L++YF FG + SV ++
Sbjct: 80 RSVFVGGLASGTDEEGLKDYFEQFGEVESVRIM 112
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 387 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKGALV 521
KKL V L D ++LREYF G + + ++ + E A+V
Sbjct: 236 KKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRTCAAIV 280
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/47 (34%), Positives = 35/47 (74%)
Frame = +1
Query: 115 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
RKL+IG L++ + + +++ +E++G + V +++D ++ RS+GFGF+
Sbjct: 9 RKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFV 54
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
L + L YRTT LK+ ++++G++ D+ + +D T S+GF F+
Sbjct: 18 LKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFV 62
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/46 (34%), Positives = 33/46 (71%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
K +IG LD++ ++ L++ + ++ ++VDV V+ D +T+R +GF F+
Sbjct: 231 KCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFV 275
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +3
Query: 372 ASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
A +++ +FV + + EE L+E FS G ++S +V D+ETGK
Sbjct: 20 ADRSLRSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGK 64
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 115 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 252
R +F+G + Y ++ LKE + + G ++ ++ D +T + KG+GF
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGF 70
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/48 (33%), Positives = 32/48 (66%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHIL 264
+++GGLD + +++ + E + Q G +V+V + KD T+ +G+GF+ L
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFL 62
Score = 35.1 bits (77), Expect = 0.060
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVV-VMKDPKTKRSKGFGFIH 258
LFIG LD + L + + +G I+ +M+D T SKGF FI+
Sbjct: 102 LFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFIN 148
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 393 LFVAGLKQDIEEEDLREYFSTFGNIVSV-SVVTDKETG 503
LF+ L +++E+ L + FS FG I+ ++ D +TG
Sbjct: 102 LFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTG 139
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +1
Query: 91 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
D E EH + +IG L Y + +L+E + +VDV V+ D +T R +GFGF+
Sbjct: 76 DLEMAEH--RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFV 127
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 390 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
+ ++ L ++E+ L E F N+V V V+TD+ETG+
Sbjct: 83 RCYIGNLSYSVDEQALEEKFHDC-NVVDVRVITDRETGR 120
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 33/48 (68%)
Frame = +1
Query: 112 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
++++F+ G + TT+S L+ F+E++G + + +++D K SKG+ FI
Sbjct: 7 SKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRD-KHGVSKGYAFI 53
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 103 PEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 252
P+ K+FIGGL + +KE +GE+ ++KD T SKG+ F
Sbjct: 669 PDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAF 718
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 390 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETG 503
K+F+ GL + E+ ++E S+FG + + ++V D TG
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATG 711
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILKP 270
++F G L TD SL + ++ + +++D K+ +SKG+GF+ P
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDP 268
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/46 (34%), Positives = 32/46 (69%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIH 258
++IGGL T++ L E + ++G + DVV+++D ++ +S+ GF+H
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVH 570
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 88 DDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHIL 264
DD T + + L T +S L+E + G I + + KD T +SKGF FI+ +
Sbjct: 172 DDGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFV 230
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 58 ILNMKPSESGDDYEEPEHTRKLF-IGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKR 234
I K S D+++ +LF I D+ D L+ +E +G+I V +++D KT+
Sbjct: 35 IAQSKHSGGKSDFQDQTTMTRLFVICPKDFN--DEDLRSKFESFGDIEYVQIVRDHKTRE 92
Query: 235 SKGFGFIHILK 267
+KG+G++ K
Sbjct: 93 NKGYGYVKFHK 103
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 381 TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKET 500
T+ +LFV K D +EDLR F +FG+I V +V D +T
Sbjct: 52 TMTRLFVICPK-DFNDEDLRSKFESFGDIEYVQIVRDHKT 90
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +3
Query: 261 SQAHMVDEAQNNRPH----KIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEE 428
S HM D ++++ P IDG V A+P + + +LF+ +
Sbjct: 293 SMQHMYD-SKSSLPSMAGFSIDGSPVYTTAALPAPAPLADQNADVASRLFIVCNPAPPPD 351
Query: 429 EDLREYFSTFGNIVSVSVVTDKETG 503
L++ FS FGN++ V ++ ++ G
Sbjct: 352 HVLKDVFSRFGNLIDVWMMKERNFG 376
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
+ +IG L Y + +L+E + ++VDV V+ D +T R +GFGF+
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFV 50
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 390 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
+ ++ L ++E+ L E F ++V V V+TD+ETG+
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGR 43
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 100 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILKP 270
+P+ +++ D +KE + G+IV + VM DP+ K SKGFGF+ P
Sbjct: 104 QPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGK-SKGFGFVSFETP 159
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +1
Query: 67 MKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGF 246
M PS +Y L++G L T++ L E + G ++ + V +D T+RS G+
Sbjct: 1 MNPSTGAANYP----IASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGY 56
Query: 247 GFIHILKP 270
+++ +P
Sbjct: 57 AYVNFQQP 64
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +3
Query: 306 KIDGRIVEPKRA-VPR--EEIKRPEASATVKKLF----VAGLKQDIEEEDLREYFSTFGN 464
++DG ++ K+ V R + +R E T K F V D+++E ++E + G
Sbjct: 75 RVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGK 134
Query: 465 IVSVSVVTDKETGKKG 512
IVS+ V+TD E KG
Sbjct: 135 IVSLKVMTDPEGKSKG 150
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 512 GFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISKTDM 631
GFGFV F+ + D+ C Q H I ++ ++VKKA K M
Sbjct: 13 GFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPKEVM 52
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 342 VPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
+P +IK P+ LFV L +EDL FS FG I+S V+ D++TG+
Sbjct: 110 IPDADIKPPD-----NVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGE 159
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +1
Query: 91 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILK 267
D + P++ LF+ L+ TTD L+ + ++G I+ V++D KT S + FI K
Sbjct: 114 DIKPPDNV--LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEK 170
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 390 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
KLFV + + EE+DLR F +G I ++++ DK TG+
Sbjct: 171 KLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQ 209
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 387 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKK 509
+KLFV + + +EEDLR FS FG I ++V+ + ++ K
Sbjct: 214 RKLFVGMISKHAKEEDLRVMFSPFGTIEELTVLRNADSTSK 254
Score = 31.1 bits (67), Expect = 0.97
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 240
KLF+G + + L+ +E +G+I ++ ++KD T + K
Sbjct: 171 KLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 94 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKG 243
Y+ + K+F+G + ++ LK+F+ +G++V ++ D KRSKG
Sbjct: 72 YKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/48 (20%), Positives = 27/48 (56%)
Frame = +3
Query: 351 EEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDK 494
++I + + + K+FV + + +L+++F FG++V ++ D+
Sbjct: 67 KDISKYKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDR 114
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 36.3 bits (80), Expect = 0.026
Identities = 12/45 (26%), Positives = 30/45 (66%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
+++G + + ++ +K+F+EQ+G + + + + K+ RSKG+ F+
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFV 144
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 36.3 bits (80), Expect = 0.026
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 97 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
+E + +++I + + +K +E +G++V + K+P T + KG+GFI
Sbjct: 193 QEAKKYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFI 245
Score = 35.1 bits (77), Expect = 0.060
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +3
Query: 315 GRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDK 494
GR +A P E EA + +++A + D+ E+D++ F FG +V S+ +
Sbjct: 176 GRPSNVPQAAPLIEQFEQEAKKYAR-IYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEP 234
Query: 495 ETGK 506
TGK
Sbjct: 235 MTGK 238
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/46 (19%), Positives = 25/46 (54%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
++++G +++ + ++ + +G I + + DP + KGF F+
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFV 148
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 115 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILK 267
R +F+G L T +S++ E++ GE V+ V + +SKGF F+ + K
Sbjct: 42 RTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRK 92
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 97 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKG 243
E+ + RK+ + + +S + E + GEI V + ++ KTK KG
Sbjct: 115 EKQDTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKG 163
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +3
Query: 381 TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVV 485
++ L+V GL+ + E+DLR++F FG + S+S+V
Sbjct: 302 SITTLYVGGLEGKVTEQDLRDHFYQFGELRSISMV 336
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEI 195
L++GGL+ + T+ L++ + Q+GE+
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGEL 330
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 35.9 bits (79), Expect = 0.034
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWG-EIVDVVVMKDPKTK-------RSKGFGFIHILKP 270
K++ G L ++ T LK +E + DV+++K+P+ + RS+GFGF+ P
Sbjct: 51 KVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANP 109
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 393 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETG 503
LFV + ++ +E+D+ E FS +G I ++ V D+ TG
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTG 331
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 76 SESGD-DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 252
S SG D + P +R + + D ++ +EQ+G I DV V+KD TK ++G +
Sbjct: 11 SNSGRIDVDNPPFSRVFIVCSKRHNAED--IRSAFEQYGTIEDVWVVKDKATKENRGVCY 68
Query: 253 IHILK 267
+ +K
Sbjct: 69 VKFVK 73
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 345 PREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDK 494
PR + P T KL+VA L +++ ++ ++E FS +G + +V + TD+
Sbjct: 1145 PRRRKRSPTPKPT--KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDR 1192
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 115 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
R ++GGL + L + +G+I DV + D T + +GFGF+
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFV 51
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 34.7 bits (76), Expect = 0.079
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
LFI L TD+ L + ++ +G ++ V D +T SK FGF+
Sbjct: 279 LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFV 323
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 393 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKET 500
LF+ L Q+ + DL + F FG ++S V DK+T
Sbjct: 279 LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQT 314
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 34.7 bits (76), Expect = 0.079
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHILKPIWLM 282
+F+ LDY+ LK+ ++ G ++ +M+D + K+SKG G + P+ M
Sbjct: 187 VFVTNLDYKVNWQKLKDTFKCAGHVIRAEIMEDDE-KKSKGMGTVQFETPMEAM 239
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 34.7 bits (76), Expect = 0.079
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 79 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVDVVV--MKDPKTKRSKGF 246
ES D P+ ++K L I L + T++ LKE + +GE+ + V K + R GF
Sbjct: 233 ESKDKSSSPKGSKKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGF 292
Query: 247 GFI 255
GF+
Sbjct: 293 GFV 295
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTK-RSKGFGFI 255
+F+ L Y TD+ K +E+ G + ++KD + R +GFG++
Sbjct: 22 IFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYV 67
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
+FI L + +T ++ ++Q+G+I V+ D T+ SKG F+
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFV 462
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 34.7 bits (76), Expect = 0.079
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 162 IKRIL*AMGRNCRCSC-NERPKNQEIKRIWIYTYSQAHMVDEAQNNRPHKIDGRIVEPKR 338
IK+I +G C +R Q + Y + D+A N +++G ++ K
Sbjct: 43 IKKIFGTVGNVTSCKLIRDRATGQSLG----YAFVNYDNPDDA-NKAVREMNGARLQNKT 97
Query: 339 AVPREEIKRPEASATVKK--LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTD 491
+ RP +S +K L+++GL +D++EE++ F FG I++ V+ D
Sbjct: 98 L--KVSFARP-SSTEIKNANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKD 147
Score = 31.9 bits (69), Expect = 0.56
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 393 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 506
L + + + +ED+++ F T GN+ S ++ D+ TG+
Sbjct: 29 LIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQ 66
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 393 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKET 500
LF+ L Q+ + DL + F FG ++S V DK+T
Sbjct: 231 LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQT 266
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFG 249
LFI L TD+ L + ++ +G ++ V D +T SK FG
Sbjct: 231 LFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFG 273
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +1
Query: 97 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
E+P+ TR LF+G L+ + L+ +E++G ++DV + K P + + F+
Sbjct: 231 EDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDI-KRPARGQGNTYAFV 282
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 345 PREEIKRPEASA-TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSV 482
P++E PE + LFV L+ I +DLR F FG ++ V +
Sbjct: 222 PQQEYIPPEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDI 268
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 330 PKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKE 497
P +A P + + K L+VA L DL+ FS +G +V +VT+ +
Sbjct: 330 PAKATPAKATPTKDKKEGGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSK 385
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/61 (21%), Positives = 32/61 (52%)
Frame = +1
Query: 73 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 252
P+++ ++ E + L++ L T + LK + Q+G++V ++ + K ++ FG
Sbjct: 335 PAKATPTKDKKEGGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGL 394
Query: 253 I 255
+
Sbjct: 395 V 395
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 121 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
LF+G L + T++ + +G I + +++ T SKG+GF+
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFV 159
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 HTRKLFIGGLDYRTTDSSL-KEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 255
H+R LF+ L + L KE + Q G + V +P S+GF F+
Sbjct: 203 HSRTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFV 252
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 390 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKGALV 521
+++V L QD+ E+DL + F +G+I V + + G A V
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFV 305
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFIHI 261
+LF+G L + +KE ++++GE+ +V + K+ KGFGFI +
Sbjct: 54 RLFVGNL-IDCDEEEMKEMFKKYGEVAEVFINKE------KGFGFIRL 94
>SB_44858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 327 EPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFS 452
EPKR + + R E T KK A KQD EEE+L+ +F+
Sbjct: 401 EPKRKTGKPLMFRSEPPQTRKKQQDADKKQDKEEEELKYFFT 442
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 387 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKGALVL 524
K L + L + I+E+DL+E +GN++ ++ D G+ ++
Sbjct: 119 KDLIIQNLPKGIQEKDLKELLQLYGNVLVCNIERDSNGDSSGSALV 164
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 97 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMK 216
E+PE R +FIGGL + + E + GEI + + K
Sbjct: 345 EKPEGCRTVFIGGLPESINEHIINEIFYVCGEITSIRISK 384
>SB_19477| Best HMM Match : GST_C (HMM E-Value=0.64)
Length = 1294
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 467 NISKCTKILSQVFFFNVLLQSSYKQLFN-GGTSFWSFNLFPWNCSFWLDNSSVNF 306
N KCT I+ + FF VLLQ+ Q F TS WS +LF S L+ + + F
Sbjct: 1073 NRVKCTVIVRIMNFFTVLLQAYPDQGFKIVPTSLWSDDLFTVVFSCALEPALIGF 1127
>SB_53270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = -3
Query: 577 VILLQAYSVNWIIIIKLYKTKA-----PFFPVSLSVTTLTETIFPNV 452
+I+L A S+N III +YK K+ FF V++ V+ + IF NV
Sbjct: 40 IIVLLAVSLNGIIIYTVYKNKSMRRNINFFIVNMCVSDILLAIFNNV 86
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 375 SATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKGAL 518
S+ K+L V + + DLR+ F +FG I V ++ + E G K A+
Sbjct: 64 SSGPKRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYN-ERGSKHAV 110
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 387 KKLFVAGLKQDIEEEDLREYFSTFGNI 467
+K+FV GL DI+E+++ F FG++
Sbjct: 344 RKVFVGGLPPDIDEDEIHASFCRFGSL 370
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 76 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEI-VDVVVMKDPKTK-RSKGFG 249
S + D P +RK+F+GGL + + + ++G + VD + K+ KG+
Sbjct: 331 SPNSDSEHIPRFSRKVFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYA 390
Query: 250 FIHILKPIWLMKL 288
F+ L+ I + KL
Sbjct: 391 FLLYLEEISVQKL 403
>SB_58997| Best HMM Match : PC_rep (HMM E-Value=4e-16)
Length = 181
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 504 KKGALVL*SLMIMIQLTEYACNKITKLK 587
++GALV S +I+IQ TE+ C+K+ K +
Sbjct: 125 RQGALVA-SALILIQQTEHTCSKVAKFR 151
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 184 WGEIVDVVVMKDPKTKRSKGFGFI 255
+GEIV+V +++D KT + KGF F+
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFL 25
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 184 WGEIVDVVVMKDPKTKRSKGFGFI 255
+GEIV+V +++D KT + KGF F+
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFL 25
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 115 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVM---KDPKTKRSKGFGFIHILK 267
RKL+IG LD R ++ ++ + +Q+GEI + P +G+ F+ K
Sbjct: 387 RKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKK 440
>SB_39416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 504 KKGALVL*SLMIMIQLTEYACNKITKLK 587
++GALV S +I+IQ TE+ C+K+ K +
Sbjct: 397 RQGALVA-SALILIQQTEHTCSKVAKFR 423
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 106 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 252
E ++FIG + + L E+ GEI + + DP T +KGF F
Sbjct: 150 ESGTEVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAF 198
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 199 DVVVMKDPKTKRSKGFGFIHILK 267
+V V+KDP +SKGFGF+ ++
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVR 563
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 97 EEPEHT-RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 240
E+PE R +F+G L +LK+++ ++GE+ V K + +K
Sbjct: 14 EDPERLDRTVFVGNLPLTLKKKALKKYFSKYGEVESVRFRSATKMESTK 62
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 118 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 252
++FIG + + L +E+ G I D +M DP + +KGF F
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAF 197
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 73 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKD 219
P E DD + + + +++ L T+ LKE Y Q+G + V +KD
Sbjct: 316 PQEEPDD-DAMKKVKVVYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKD 363
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 426 EEDLREYFSTFGNIVSVSVVTDKETG 503
E +L +FS FG + V +V D+ TG
Sbjct: 1079 ELELETFFSNFGPVADVRIVCDRRTG 1104
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 142 YRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKG 243
+ TT+ L+ F+ +G + DV ++ D +T +KG
Sbjct: 1075 FLTTELELETFFSNFGPVADVRIVCDRRTGLNKG 1108
>SB_44083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 312 DGRIVEPKRAVPREEIKRPEASATV 386
D R VEP ++P E+KR A +V
Sbjct: 99 DNRAVEPPESIPNSEVKRSIADGSV 123
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 411 KQDIEEEDLREYFSTFGNIVSVSVVTDKETG 503
KQ + + EY S G+ S++ DKETG
Sbjct: 35 KQTVALKKADEYLSVHGDKADASIIHDKETG 65
>SB_5071| Best HMM Match : RIO1 (HMM E-Value=0)
Length = 556
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 533 DDYDPVDRVCLQQNHQIKDQHLDVKKAISKT 625
D DPVD Q+N Q +D++ D +K KT
Sbjct: 406 DGEDPVDEDVRQENKQTRDENQDNEKEPPKT 436
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,982,772
Number of Sequences: 59808
Number of extensions: 369423
Number of successful extensions: 1495
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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