Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00736
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.46 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.4  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    25   1.8  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   9.8  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 172  FYEQWGEIVDVVVMKDPKTKRSKGFGFIHILKPIWLMKLKIIGLTKLTEELSSQNEQF 345
            ++ + G  V VVV  DP+T R +   +  I +PI  M+ K   LT   +E  +  E F
Sbjct: 1703 YHNRMGRPVQVVVYDDPRTVRVREIIYDEIDRPI--MQTKWTKLTSHLKEYFAFYENF 1758


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 542 HNHQTLQNQSPFLSCFFICHNTNRNNISK 456
           H+HQ + NQ   L CF  C N     + K
Sbjct: 426 HHHQQVHNQQRILYCF--CRNVECKELEK 452


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 716 IDQNDSNLRGFPPDPRVDRDLIYHYPRQTCQFSILLFSHPNVD 588
           I++N  +L GFP  P++DR  +   P    Q    +  H  VD
Sbjct: 10  IEKNLLSLFGFPNRPKIDRSKVV-IPEAMKQLYAQIMGHDLVD 51


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 285 AQNNRPHKIDGRIVEPKRAVPREEIKRPEA 374
           AQ   P    G+  +PK+   +  + +PEA
Sbjct: 143 AQRETPKSSGGQSKQPKKKKKKRSLPKPEA 172


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,043
Number of Sequences: 2352
Number of extensions: 12396
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)