Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00734
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   2.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.5  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   6.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 359 KSIII*FFVAFLSIPKMYDEY*RCRSKIDIQFLIK 463
           K++++  FVA LS+    D+Y      ID+  ++K
Sbjct: 2   KTLVLVLFVAVLSVVFAADKYTTKYDNIDLNQILK 36


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = -1

Query: 596 CYSYITKKNNLNIVIYAK--NLSKNDPHYLLKLPN*FKRN-EIHQGIILLGTEYQFLTYS 426
           CY   +KK+  ++  + K  N+    P Y  + P+  K   +  QG++L+        YS
Sbjct: 2   CYFNYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVVLVSIIAAGTAYS 61

Query: 425 VNIHHTF 405
           + + HT+
Sbjct: 62  IYVRHTY 68


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = -1

Query: 596 CYSYITKKNNLNIVIYAK--NLSKNDPHYLLKLPN*FKRN-EIHQGIILLGTEYQFLTYS 426
           CY   +KK+  ++  + K  N+    P Y  + P+  K   +  QG++L+        YS
Sbjct: 2   CYFNYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVVLVSIIAAGTAYS 61

Query: 425 VNIHHTF 405
           + + HT+
Sbjct: 62  IYVRHTY 68


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 417 NIDAVGQKL-IFSS**NNTLVNFISLKLIWQLQ*IMWVVFRQVLCIYHYI*IVL 575
           N+  +G++  I SS      +N ISL  +W  Q  + ++  Q+L  +  I ++L
Sbjct: 177 NVKGLGKQYNIASSKTLKLSINIISLVQLWIFQLYLLILCDQILREFDQIVVIL 230


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +2

Query: 359 KSIII*FFVAFLSIPKMYDEY*RCRSKIDIQFLIK 463
           K++++  FVA +S+    D+Y      ID+  ++K
Sbjct: 2   KTLVLVLFVAVVSVVFAADKYTTKYDNIDLNQILK 36


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 240 CYCNIKLDPSEYNIILILQK 181
           CY  IK+D   Y ++ ++ K
Sbjct: 153 CYLEIKIDEHLYPVVALVVK 172


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/56 (23%), Positives = 26/56 (46%)
 Frame = +3

Query: 480 FISLKLIWQLQ*IMWVVFRQVLCIYHYI*IVLLGNV*ITKSVVL*FYIEMGGCILC 647
           F S  +I+ +  + + V   +LCIY++    +L  V +   V + ++  M     C
Sbjct: 215 FYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCC 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,295
Number of Sequences: 336
Number of extensions: 4487
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)