Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00734
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069781-1|AAC26858.1|  338|Drosophila melanogaster Bem46-like p...    29   5.0  
AE014134-529|AAF51169.1|  338|Drosophila melanogaster CG18642-PA...    29   5.0  
AY058503-1|AAL13732.1|  627|Drosophila melanogaster LD21207p pro...    29   8.8  
AE014297-4718|AAF57128.1|  641|Drosophila melanogaster CG18729-P...    29   8.8  

>AF069781-1|AAC26858.1|  338|Drosophila melanogaster Bem46-like
           protein protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 141 YHIYGVFISLVCFASVKLRLYYIR*DRVLYY 233
           Y+ YG +++L  FA + L ++Y   D +LY+
Sbjct: 29  YYFYGGYMTLALFAGIILLIFYYAQDLLLYH 59


>AE014134-529|AAF51169.1|  338|Drosophila melanogaster CG18642-PA
           protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 141 YHIYGVFISLVCFASVKLRLYYIR*DRVLYY 233
           Y+ YG +++L  FA + L ++Y   D +LY+
Sbjct: 29  YYFYGGYMTLALFAGIILLIFYYAQDLLLYH 59


>AY058503-1|AAL13732.1|  627|Drosophila melanogaster LD21207p
           protein.
          Length = 627

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 627 FQYRITVQHFLLFIHYQEEQFKYSDICKELV*KRPTL 517
           FQ   T++H L+   +      Y+D+C EL+ K P L
Sbjct: 500 FQIHCTLEHLLMMHIHLNLANVYNDVCSELLKKPPKL 536


>AE014297-4718|AAF57128.1|  641|Drosophila melanogaster CG18729-PA
           protein.
          Length = 641

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 627 FQYRITVQHFLLFIHYQEEQFKYSDICKELV*KRPTL 517
           FQ   T++H L+   +      Y+D+C EL+ K P L
Sbjct: 514 FQIHCTLEHLLMMHIHLNLANVYNDVCSELLKKPPKL 550


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,876,919
Number of Sequences: 53049
Number of extensions: 651089
Number of successful extensions: 1345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)