Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00732
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    26   0.11 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   0.60 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.6  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    20   9.8  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 174 RGFLKHILNCVLVSINNISVHYSIAYDNINSVHLL 70
           R F+   + CV V++      Y+I YDN+N   +L
Sbjct: 2   RFFVIFFVACVSVALARPEDQYTIKYDNVNLKEIL 36


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 360 RKKLMLNTDKYYSSLLAYTSTVRHSSLSR 274
           ++K  ++  +  + L+AYTS   HSS+ R
Sbjct: 169 KEKPEMSDSEIVAKLVAYTSAQSHSSVER 197


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 349 NVKYRQILFIITSLYVYCT 293
           N+KYR+  F ++    +CT
Sbjct: 390 NLKYRETYFRLSKTKTFCT 408


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 223 LSSMMREMSGADRTWCE 273
           L   MR+ SGA R  CE
Sbjct: 622 LLDKMRDSSGAGRITCE 638


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 111 YSIAYDNINSVHLLLLKHPLRVIF 40
           Y+  YDNIN   +L  +  L+  F
Sbjct: 19  YTTKYDNINVDEILASERLLKNYF 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,745
Number of Sequences: 336
Number of extensions: 1568
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)