Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00732
         (386 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   0.42 
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    23   5.1  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   5.1  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    22   6.8  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    22   9.0  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    22   9.0  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 26.2 bits (55), Expect = 0.42
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 222  KTLHKITILQEVRSSFRGF-LKHILNCVLVSINNI 121
            K L  + +L+ +R+  R   LKH++ CV+V++  I
Sbjct: 951  KILRVLRVLRPLRAINRAKGLKHVVQCVIVAVKTI 985


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 141 LVSINNISVHYSIAYDNINSVHLLL-LKHPLRVIFL 37
           +V  ++ISV+  +  D  NS H+LL L H  R  FL
Sbjct: 361 IVESSSISVNRQLYGDTHNSGHVLLSLVHDPREDFL 396


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
          subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 32 TSKNITRSGCFNSKRCTELI 91
          +S+ +T+S CF  K C E +
Sbjct: 24 SSRVVTQSKCFFQKNCIECL 43


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 299 LYDIALSRGSHHVRSAPLISLIIELKKHYIK 207
           LYD+ L  G     SA      IEL + Y+K
Sbjct: 871 LYDVDLKNGDTETISASEEQFWIELIEKYLK 901


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 324 SSLLAYTSTVRHSSLSR 274
           S L+ YTS   HSS+ R
Sbjct: 188 SKLVGYTSNQSHSSVER 204


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 324 SSLLAYTSTVRHSSLSR 274
           S L+ YTS   HSS+ R
Sbjct: 219 SKLVGYTSNQSHSSVER 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,619
Number of Sequences: 2352
Number of extensions: 5698
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)