Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00732
         (386 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208943-1|BAD92180.1|  627|Homo sapiens leucine-rich repeat-con...    31   1.3  
AL162739-6|CAI19297.1|  367|Homo sapiens novel protein protein.        29   5.2  
AL162739-5|CAI19298.1|  995|Homo sapiens novel protein protein.        29   5.2  
AL162739-3|CAI19295.1|  351|Homo sapiens novel protein protein.        29   5.2  
AL139343-4|CAI19094.1|  367|Homo sapiens novel protein protein.        29   5.2  
AL139343-3|CAI19093.1|  995|Homo sapiens novel protein protein.        29   5.2  
AL139343-2|CAI19092.1|  351|Homo sapiens novel protein protein.        29   5.2  

>AB208943-1|BAD92180.1|  627|Homo sapiens leucine-rich
           repeat-containing G protein-coupled receptor 7 variant
           protein.
          Length = 627

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = -3

Query: 207 ITILQEVRSSFRGFLKHILNCVLVSINNISVHYSIAYDNINSVHLLLLKHPLRVIFLLVN 28
           +T  Q ++++ +  L H  N   +  N I+     A+  +NS+  L L H  R+ FL   
Sbjct: 4   VTCTQNMKAALKSLLYHSRNLGYLQNNKITSISIYAFRGLNSLTKLYLSHN-RITFLKPG 62

Query: 27  INRDLFQL 4
           +  DL +L
Sbjct: 63  VFEDLHRL 70


>AL162739-6|CAI19297.1|  367|Homo sapiens novel protein protein.
          Length = 367

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 198 LQEVRSSFRGFLKHILNCVLVSIN-NISVHYSIAYDNINSVHLLL 67
           L EV+     FLK ++N  L   N N ++HYS+++ N + V LLL
Sbjct: 174 LHEVQPHSPHFLKLLVN--LADHNGNTALHYSVSHSNFSIVKLLL 216


>AL162739-5|CAI19298.1|  995|Homo sapiens novel protein protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 198 LQEVRSSFRGFLKHILNCVLVSIN-NISVHYSIAYDNINSVHLLL 67
           L EV+     FLK ++N  L   N N ++HYS+++ N + V LLL
Sbjct: 802 LHEVQPHSPHFLKLLVN--LADHNGNTALHYSVSHSNFSIVKLLL 844


>AL162739-3|CAI19295.1|  351|Homo sapiens novel protein protein.
          Length = 351

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 198 LQEVRSSFRGFLKHILNCVLVSIN-NISVHYSIAYDNINSVHLLL 67
           L EV+     FLK ++N  L   N N ++HYS+++ N + V LLL
Sbjct: 158 LHEVQPHSPHFLKLLVN--LADHNGNTALHYSVSHSNFSIVKLLL 200


>AL139343-4|CAI19094.1|  367|Homo sapiens novel protein protein.
          Length = 367

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 198 LQEVRSSFRGFLKHILNCVLVSIN-NISVHYSIAYDNINSVHLLL 67
           L EV+     FLK ++N  L   N N ++HYS+++ N + V LLL
Sbjct: 174 LHEVQPHSPHFLKLLVN--LADHNGNTALHYSVSHSNFSIVKLLL 216


>AL139343-3|CAI19093.1|  995|Homo sapiens novel protein protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 198 LQEVRSSFRGFLKHILNCVLVSIN-NISVHYSIAYDNINSVHLLL 67
           L EV+     FLK ++N  L   N N ++HYS+++ N + V LLL
Sbjct: 802 LHEVQPHSPHFLKLLVN--LADHNGNTALHYSVSHSNFSIVKLLL 844


>AL139343-2|CAI19092.1|  351|Homo sapiens novel protein protein.
          Length = 351

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 198 LQEVRSSFRGFLKHILNCVLVSIN-NISVHYSIAYDNINSVHLLL 67
           L EV+     FLK ++N  L   N N ++HYS+++ N + V LLL
Sbjct: 158 LHEVQPHSPHFLKLLVN--LADHNGNTALHYSVSHSNFSIVKLLL 200


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,074,420
Number of Sequences: 237096
Number of extensions: 752366
Number of successful extensions: 1566
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)