Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00732
         (386 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   2.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   2.8  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   6.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.5  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    20   8.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    20   8.6  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 138 VSINNISVHYSIAYDNI 88
           +SIN  ++HY++ Y ++
Sbjct: 589 MSINQAAIHYNLPYSSL 605


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 207 ITILQEVRSSFRGFLKHIL 151
           +T+L    +SF G L HIL
Sbjct: 292 VTVLGWGHTSFNGMLSHIL 310


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 259 RTWCEPRERAMSYSR 303
           R+W  PRE A + S+
Sbjct: 45  RSWSRPRESAQTTSK 59


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = -3

Query: 363 NRKKLMLNTDKYYSSLLAYTSTVRHSSLSRFAPCPVRTAHLPH 235
           +++K++ +  + YS   + +   R S  S  +P P      PH
Sbjct: 12  SQRKIIRSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPH 54


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = -3

Query: 144 VLVSINNISVHYSIAYDNINSVHL 73
           ++ S++N ++H +  Y+N N+  L
Sbjct: 303 IISSLSNKTIHNNNNYNNYNNKKL 326


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 259 RTWCEPRERAMSYSR 303
           R+W  PRE A + S+
Sbjct: 166 RSWSRPREPAQTTSK 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,648
Number of Sequences: 438
Number of extensions: 1713
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)