Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00731
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    33   0.002
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   1.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   1.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   3.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.1  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    21   9.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
 Frame = +3

Query: 267 CPSDKSCINSKC-DTPCNADICQEPAQCKVHLHQAHCACPPGFT--NTGKECRKTEGPQC 437
           CP   S IN +  D  C    C     C   ++   C C PGFT  N        +   C
Sbjct: 11  CPLGFSGINCQTNDEDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSSPC 70

Query: 438 ISDIDCPSGTGCLNYRCVNP 497
           ++   C   T   +Y C  P
Sbjct: 71  LNGATCQDHT--THYTCHCP 88



 Score = 31.5 bits (68), Expect = 0.006
 Identities = 19/64 (29%), Positives = 27/64 (42%)
 Frame = +3

Query: 312 CNADICQEPAQCKVHLHQAHCACPPGFTNTGKECRKTEGPQCISDIDCPSGTGCLNYRCV 491
           C++  C   A C+ H     C CP G+  TGK+C   E     S   C +   C+  +  
Sbjct: 65  CDSSPCLNGATCQDHTTHYTCHCPYGY--TGKDC--GEYVDWCSTNPCENQATCVQNKNQ 120

Query: 492 NPCL 503
             CL
Sbjct: 121 YQCL 124



 Score = 31.5 bits (68), Expect = 0.006
 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
 Frame = +3

Query: 249 LQTDTDCPSDKSCINSKCDTP---CNADICQEPAQCKVHLHQAH-CACPPGFTNTGKECR 416
           L  D  C      +   C++    C    CQ    C   +H  H C CP GF   GK C 
Sbjct: 318 LVNDYHCNCKLGFMGRHCESKVNFCATSPCQNGGVCTT-IHAGHKCTCPEGF--YGKNC- 373

Query: 417 KTEGPQCISDIDCPSGTGC 473
           +  G  C S+  C +G  C
Sbjct: 374 EFSGYDCDSN-PCQNGGVC 391



 Score = 31.1 bits (67), Expect = 0.008
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 14/85 (16%)
 Frame = +1

Query: 7   CACRQGFIGDAS----SGCYEIQCQSDSHCADDETCINRRCVPA-----CSVNA-----N 144
           C C  G+ G       + C    CQ+   C D     + +C        C +N      N
Sbjct: 170 CHCSDGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSCKCPKGFQGQNCELNVDDCKPN 229

Query: 145 TCGQSAECYGLEHRASCRCKIGTVG 219
            C     C+ L +  SC C  GT+G
Sbjct: 230 PCQNGGTCHDLVNSFSCSCPSGTLG 254



 Score = 28.3 bits (60), Expect = 0.059
 Identities = 22/88 (25%), Positives = 30/88 (34%), Gaps = 16/88 (18%)
 Frame = +1

Query: 4   VCACRQGFIGDASSG----CYEIQCQSDSHCADDETCINRRC------------VPACSV 135
           +C C+ GF G         C    C + + C D  T     C            V  CS 
Sbjct: 46  ICTCKPGFTGSNCQNRINLCDSSPCLNGATCQDHTTHYTCHCPYGYTGKDCGEYVDWCST 105

Query: 136 NANTCGQSAECYGLEHRASCRCKIGTVG 219
           N   C   A C   +++  C C +G  G
Sbjct: 106 NP--CENQATCVQNKNQYQCLCGVGWTG 131



 Score = 27.9 bits (59), Expect = 0.078
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 312 CNADICQEPAQCKVHLHQAHCACPPGFTNTGKEC 413
           C+ + C+  A C  + +Q  C C  G+  TGK C
Sbjct: 103 CSTNPCENQATCVQNKNQYQCLCGVGW--TGKVC 134



 Score = 27.9 bits (59), Expect = 0.078
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +3

Query: 312 CNADICQEPAQCKVHLHQAHCACPPGFTNTGKECRKTEGPQCISDIDCPSGT 467
           C    C     C   +    C CPPGF   G  C + +  +C+S+    +GT
Sbjct: 264 CRPGACHNNGTCLDKVGGFECKCPPGF--VGPRC-EGDINECLSNPCSNAGT 312



 Score = 26.6 bits (56), Expect = 0.18
 Identities = 22/88 (25%), Positives = 29/88 (32%), Gaps = 14/88 (15%)
 Frame = +3

Query: 267 CPSDKSCINSKCDTP---CNADICQEPAQCKVHLHQAHCACPPGFTNTGKE-----CRKT 422
           C        S C T    C++  CQ    C   +    C CP GF     E     C+  
Sbjct: 170 CHCSDGYSGSYCQTEINECDSAPCQNGGTCLDLIGSYSCKCPKGFQGQNCELNVDDCKPN 229

Query: 423 ---EGPQC---ISDIDCPSGTGCLNYRC 488
               G  C   ++   C   +G L Y C
Sbjct: 230 PCQNGGTCHDLVNSFSCSCPSGTLGYIC 257



 Score = 25.4 bits (53), Expect = 0.42
 Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 16/87 (18%)
 Frame = +1

Query: 7   CACRQGFIGDASS----GCYEIQCQSDSHCADDETCINRRCVPA-----CSVNANTC--- 150
           C+C  G +G         C    C ++  C D       +C P      C  + N C   
Sbjct: 246 CSCPSGTLGYICEINVDDCRPGACHNNGTCLDKVGGFECKCPPGFVGPRCEGDINECLSN 305

Query: 151 ----GQSAECYGLEHRASCRCKIGTVG 219
                 + +C  L +   C CK+G +G
Sbjct: 306 PCSNAGTLDCVQLVNDYHCNCKLGFMG 332



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +2

Query: 557 VKTMVCECLPGYKGNALQ 610
           + + +C C PG+ G+  Q
Sbjct: 42  INSYICTCKPGFTGSNCQ 59



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 532 VQDCRHHACKNHG 570
           V DCR  AC N+G
Sbjct: 261 VDDCRPGACHNNG 273



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 267 CPSDKSCINSKCDTPCNADICQ 332
           CP  +   N +CD  CN   C+
Sbjct: 493 CPVKRG--NGRCDEECNTYACE 512


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
 Frame = +2

Query: 515 CSENAQCKIVDTMPVKTMVCECLPGYKG----NALQECK--PYQTVAKCIER 652
           C E+  C     +P     C+C PG+ G      + +CK  P +    C+++
Sbjct: 38  CGEHGHCV---NLPGVGHRCQCQPGFTGKYCHENINDCKVNPCENGGTCVDK 86


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 564 PWFVNVCLDTKEMHYKNASHIKL-LLN 641
           P+F+N+ ++ +  HY N   ++  LLN
Sbjct: 187 PYFINLLMELQYCHYLNILRVRYQLLN 213


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 564 PWFVNVCLDTKEMHYKNASHIKL-LLN 641
           P+F+N+ ++ +  HY N   ++  LLN
Sbjct: 187 PYFINLLMELQYCHYLNILRVRYQLLN 213


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +1

Query: 208 GTVGNPSIACTPIGC 252
           G    PSI C P GC
Sbjct: 54  GQCFGPSICCGPFGC 68


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +3

Query: 273 SDKSCINSKCDTPCNADICQEPAQCKVHLHQAHCACPPGF 392
           +D S    KCD P N D    P   +    Q HC    G+
Sbjct: 75  NDYSSEYEKCDLPFNIDCTSRPKLQEPQPSQ-HCPRKHGY 113


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/29 (24%), Positives = 11/29 (37%)
 Frame = +3

Query: 288 INSKCDTPCNADICQEPAQCKVHLHQAHC 374
           +   CD P  ++ C    Q    +   HC
Sbjct: 71  VTEGCDYPWRSNYCDNKQQANPPISTEHC 99



 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 300 CDTPCNADICQEPAQC 347
           CD P N D CQ+   C
Sbjct: 141 CDWPENVDGCQKHPLC 156


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 312 RAYHIWN*YMIYQMDNL 262
           +AY +W   +IY++D++
Sbjct: 59  QAYELWFKQIIYELDSI 75


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 312 RAYHIWN*YMIYQMDNL 262
           +AY +W   +IY++D++
Sbjct: 59  QAYELWFKQIIYELDSI 75


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 312 RAYHIWN*YMIYQMDNL 262
           +AY +W   +IY++D++
Sbjct: 59  QAYELWFKQIIYELDSI 75


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 453 SLYHLYIVVLQFFYILSL 400
           +LY+L + V+   Y+L+L
Sbjct: 98  NLYYLLLFVINVLYVLTL 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,672
Number of Sequences: 336
Number of extensions: 4656
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)