Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00730
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012995-1|AAH12995.2| 417|Homo sapiens MTERF domain containing... 68 3e-11
AF132946-1|AAD27721.1| 327|Homo sapiens CGI-12 protein protein. 68 3e-11
BC063308-1|AAH63308.1| 961|Homo sapiens DDEF2 protein protein. 31 5.6
AF399517-1|AAK95002.1| 216|Homo sapiens olfactory receptor prot... 31 5.6
AC079782-1|AAY14904.1| 328|Homo sapiens unknown protein. 31 5.6
AB065835-1|BAC06054.1| 319|Homo sapiens seven transmembrane hel... 31 5.6
AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein. 31 5.6
BC150280-1|AAI50281.1| 1925|Homo sapiens plexin D1 protein. 30 9.8
BC044228-1|AAH44228.1| 200|Homo sapiens Similar to plexin A pro... 30 9.8
BC003526-1|AAH03526.1| 540|Homo sapiens Unknown (protein for IM... 30 9.8
BC003088-1|AAH03088.1| 249|Homo sapiens RRAGD protein protein. 30 9.8
AY116661-1|AAM49063.1| 1925|Homo sapiens plexin D1 protein. 30 9.8
AL138717-3|CAB99362.1| 400|Homo sapiens protein ( onical ubiqui... 30 9.8
AL138717-2|CAB99361.1| 249|Homo sapiens protein ( Human DNA seq... 30 9.8
AF272036-1|AAG32663.1| 400|Homo sapiens Rag D protein. 30 9.8
AB014520-1|BAA31595.1| 1985|Homo sapiens KIAA0620 protein protein. 30 9.8
>BC012995-1|AAH12995.2| 417|Homo sapiens MTERF domain containing 1
protein.
Length = 417
Score = 68.1 bits (159), Expect = 3e-11
Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 506 VLKLDFEKNMKSHIVFLSDY-VNMEQMGEFFTKNPMIFCEHLEDLKTRVNYLESQRFSDS 682
+L+LDFEK++K ++FL D + Q+G F TKN IF E LE+LKTRV YL S+ FS +
Sbjct: 179 LLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKTRVAYLHSKNFSKA 238
Query: 683 EIKRIISK 706
++ +++ K
Sbjct: 239 DVAQMVRK 246
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 384 PFLSNTFNLAAYVNHSKTLQNLIDLNVNISKFEKKP 491
P +F L YV+HS+TLQ L+ L V++SK EK P
Sbjct: 138 PLPPASFTLRDYVDHSETLQKLVLLGVDLSKIEKHP 173
>AF132946-1|AAD27721.1| 327|Homo sapiens CGI-12 protein protein.
Length = 327
Score = 68.1 bits (159), Expect = 3e-11
Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 506 VLKLDFEKNMKSHIVFLSDY-VNMEQMGEFFTKNPMIFCEHLEDLKTRVNYLESQRFSDS 682
+L+LDFEK++K ++FL D + Q+G F TKN IF E LE+LKTRV YL S+ FS +
Sbjct: 89 LLRLDFEKDIKQMLLFLKDVGIEDNQLGAFLTKNHAIFSEDLENLKTRVAYLHSKNFSKA 148
Query: 683 EIKRIISK 706
++ +++ K
Sbjct: 149 DVAQMVRK 156
Score = 39.1 bits (87), Expect = 0.016
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 384 PFLSNTFNLAAYVNHSKTLQNLIDLNVNISKFEKKP 491
P +F L YV+HS+TLQ L+ L V++SK EK P
Sbjct: 48 PLPPASFTLRDYVDHSETLQKLVLLGVDLSKIEKHP 83
>BC063308-1|AAH63308.1| 961|Homo sapiens DDEF2 protein protein.
Length = 961
Score = 30.7 bits (66), Expect = 5.6
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +1
Query: 88 KGLIYQVIKSLKKINKTRPKQLWKIEKVPVEYTFKLSLF-WEMAICKLFIRILKIQKLFL 264
KG+ + K K K ++ KIEK E+ + E++ ++ + K ++ F
Sbjct: 136 KGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQ 195
Query: 265 LDPCVAIYKLNLVKVKFAVLVMKNPPMYFNEHIKIY 372
L C + K+N +K+K V +++N YF+ +
Sbjct: 196 LQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFF 231
>AF399517-1|AAK95002.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 30.7 bits (66), Expect = 5.6
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = -2
Query: 717 ANKVLLIIRFISLSENLWLSR*LTL-VFKSSKCSQNIIGFFVKNS-PICSMLT*SERNTI 544
A KVL ++ + + ++S LT+ +FK S C NII +F + P+ S+L S+ N +
Sbjct: 70 AEKVLWVLVIVPYLYSTFVSLFLTIKLFKLSFCGSNIISYFYCDCIPLMSILC-SDTNEL 128
Query: 543 WLFI-FFSKSN 514
L I FS N
Sbjct: 129 ELIILIFSGCN 139
>AC079782-1|AAY14904.1| 328|Homo sapiens unknown protein.
Length = 328
Score = 30.7 bits (66), Expect = 5.6
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +1
Query: 88 KGLIYQVIKSLKKINKTRPKQLWKIEKVPVEYTFKLSLF-WEMAICKLFIRILKIQKLFL 264
KG+ + K K K ++ KIEK E+ + E++ ++ + K ++ F
Sbjct: 94 KGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQ 153
Query: 265 LDPCVAIYKLNLVKVKFAVLVMKNPPMYFNEHIKIY 372
L C + K+N +K+K V +++N YF+ +
Sbjct: 154 LQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFF 189
>AB065835-1|BAC06054.1| 319|Homo sapiens seven transmembrane helix
receptor protein.
Length = 319
Score = 30.7 bits (66), Expect = 5.6
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = -2
Query: 717 ANKVLLIIRFISLSENLWLSR*LTL-VFKSSKCSQNIIGFFVKNS-PICSMLT*SERNTI 544
A KVL ++ + + ++S LT+ +FK S C NII +F + P+ S+L S+ N +
Sbjct: 143 AEKVLWVLVIVPYLYSTFVSLFLTIKLFKLSFCGSNIISYFYCDCIPLMSILC-SDTNEL 201
Query: 543 WLFI-FFSKSN 514
L I FS N
Sbjct: 202 ELIILIFSGCN 212
>AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.
Length = 1022
Score = 30.7 bits (66), Expect = 5.6
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +1
Query: 88 KGLIYQVIKSLKKINKTRPKQLWKIEKVPVEYTFKLSLF-WEMAICKLFIRILKIQKLFL 264
KG+ + K K K ++ KIEK E+ + E++ ++ + K ++ F
Sbjct: 152 KGVKGDLKKPFDKAWKDYETKITKIEKEKKEHAKLHGMIRTEISGAEIAEEMEKERRFFQ 211
Query: 265 LDPCVAIYKLNLVKVKFAVLVMKNPPMYFNEHIKIY 372
L C + K+N +K+K V +++N YF+ +
Sbjct: 212 LQMCEYLLKVNEIKIKKGVDLLQNLIKYFHAQCNFF 247
>BC150280-1|AAI50281.1| 1925|Homo sapiens plexin D1 protein.
Length = 1925
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 345 VLQRTYKDLSDVTPFLSNTFNLAAYVNHSKTLQNLIDLNVNISKFEK 485
++QR YK + D+TP N A S+ QN + NV +++ K
Sbjct: 1834 IVQRYYKQIQDMTPLSEQEMN-AHLAEESRKYQNEFNTNVAMAEIYK 1879
>BC044228-1|AAH44228.1| 200|Homo sapiens Similar to plexin A
protein.
Length = 200
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 345 VLQRTYKDLSDVTPFLSNTFNLAAYVNHSKTLQNLIDLNVNISKFEK 485
++QR YK + D+TP N A S+ QN + NV +++ K
Sbjct: 109 IVQRYYKQIQDMTPLSEQEMN-AHLAEESRKYQNEFNTNVAMAEIYK 154
>BC003526-1|AAH03526.1| 540|Homo sapiens Unknown (protein for
IMAGE:3607457) protein.
Length = 540
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 345 VLQRTYKDLSDVTPFLSNTFNLAAYVNHSKTLQNLIDLNVNISKFEK 485
++QR YK + D+TP N A S+ QN + NV +++ K
Sbjct: 449 IVQRYYKQIQDMTPLSEQEMN-AHLAEESRKYQNEFNTNVAMAEIYK 494
>BC003088-1|AAH03088.1| 249|Homo sapiens RRAGD protein protein.
Length = 249
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 593 KIHPFVPC*RNQKEILYGFSYFSQSLILKLLNNVRFLLKFTNVDVQVYEIL*CLRMIYIC 414
K+ P +P N I S ++ + +++ + T VD+Q YE+ C MI +
Sbjct: 85 KLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYEL--CCDMIDVV 142
Query: 413 SQIECV 396
I C+
Sbjct: 143 IDISCI 148
>AY116661-1|AAM49063.1| 1925|Homo sapiens plexin D1 protein.
Length = 1925
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 345 VLQRTYKDLSDVTPFLSNTFNLAAYVNHSKTLQNLIDLNVNISKFEK 485
++QR YK + D+TP N A S+ QN + NV +++ K
Sbjct: 1834 IVQRYYKQIQDMTPLSEQEMN-AHLAEESRKYQNEFNTNVAMAEIYK 1879
>AL138717-3|CAB99362.1| 400|Homo sapiens protein ( onical ubiquitin
conjugating ).).
Length = 400
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 593 KIHPFVPC*RNQKEILYGFSYFSQSLILKLLNNVRFLLKFTNVDVQVYEIL*CLRMIYIC 414
K+ P +P N I S ++ + +++ + T VD+Q YE+ C MI +
Sbjct: 236 KLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYEL--CCDMIDVV 293
Query: 413 SQIECV 396
I C+
Sbjct: 294 IDISCI 299
>AL138717-2|CAB99361.1| 249|Homo sapiens protein ( Human DNA
sequence from clone RP11-11D8 on chromosome 6 Contains
the5' end of the NCUBE1 gene for non-canonical ubiquitin
conjugating ).
Length = 249
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 593 KIHPFVPC*RNQKEILYGFSYFSQSLILKLLNNVRFLLKFTNVDVQVYEIL*CLRMIYIC 414
K+ P +P N I S ++ + +++ + T VD+Q YE+ C MI +
Sbjct: 85 KLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYEL--CCDMIDVV 142
Query: 413 SQIECV 396
I C+
Sbjct: 143 IDISCI 148
>AF272036-1|AAG32663.1| 400|Homo sapiens Rag D protein.
Length = 400
Score = 29.9 bits (64), Expect = 9.8
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -3
Query: 593 KIHPFVPC*RNQKEILYGFSYFSQSLILKLLNNVRFLLKFTNVDVQVYEIL*CLRMIYIC 414
K+ P +P N I S ++ + +++ + T VD+Q YE+ C MI +
Sbjct: 236 KLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYEL--CCDMIDVV 293
Query: 413 SQIECV 396
I C+
Sbjct: 294 IDISCI 299
>AB014520-1|BAA31595.1| 1985|Homo sapiens KIAA0620 protein protein.
Length = 1985
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 345 VLQRTYKDLSDVTPFLSNTFNLAAYVNHSKTLQNLIDLNVNISKFEK 485
++QR YK + D+TP N A S+ QN + NV +++ K
Sbjct: 1894 IVQRYYKQIQDMTPLSEQEMN-AHLAEESRKYQNEFNTNVAMAEIYK 1939
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,930,840
Number of Sequences: 237096
Number of extensions: 1953492
Number of successful extensions: 6840
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6838
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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