Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00730
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   3.9  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    22   5.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.8  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 96  YLPGHKIP 119
           YLPGHK+P
Sbjct: 64  YLPGHKLP 71


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 409 KLNVFDKNGVTSD 371
           K  V+DKNG+T D
Sbjct: 61  KQRVYDKNGMTGD 73


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 339 WVFHN*YCKFHFHQ 298
           W FH    +F+FHQ
Sbjct: 180 WTFHEGRKQFYFHQ 193


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,532
Number of Sequences: 438
Number of extensions: 4105
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)