Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00729
(718 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 69 4e-12
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 68 9e-12
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 60 2e-09
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 59 3e-09
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 58 9e-09
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 56 4e-08
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 54 1e-07
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 50 1e-06
01_06_0729 - 31546464-31546574,31546653-31546694,31546795-315468... 38 0.006
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 38 0.011
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 38 0.011
01_01_0746 + 5772340-5773083 32 0.40
02_05_0363 - 28297295-28298167 30 1.6
05_06_0087 + 25450471-25450827 29 4.9
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 29 4.9
11_01_0712 - 5844291-5844474,5844722-5844777,5844861-5844959,584... 28 6.4
08_01_0421 - 3735155-3736067,3736154-3736176 28 6.4
10_08_0871 - 21181798-21181917,21182024-21182065,21182162-211821... 28 8.5
09_04_0597 - 18859601-18859818,18860914-18861083,18861250-188613... 28 8.5
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101... 28 8.5
04_04_1493 - 33977964-33978176,33978254-33978347,33978452-339788... 28 8.5
04_03_0070 + 10677677-10679989 28 8.5
01_03_0105 + 12604125-12604583 28 8.5
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 68.9 bits (161), Expect = 4e-12
Identities = 33/77 (42%), Positives = 46/77 (59%)
Frame = +2
Query: 482 LCRRKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 661
+C + PE + IPGAGGTQRLPR VG+S+A E++ TG +A EA MGL +
Sbjct: 131 ICGENATLGLPETGLAIIPGAGGTQRLPRIVGRSRAKEMIFTGRRCNATEAVMMGLANYC 190
Query: 662 FPVEKLLEETIKLAERI 712
P + E+ ++LA I
Sbjct: 191 VPAGEAHEKALELAREI 207
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3
Query: 390 DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
D+ P IA + G ALGGG ELA+ CD+ GE A G P + LA P
Sbjct: 100 DLKALSIPTIAVIEGAALGGGLELALSCDLRICGENATLGLPETGLAIIP 149
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 67.7 bits (158), Expect = 9e-12
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +3
Query: 255 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNG 434
DAD +AA+++ G +AF +G D+ + + + K + C KPI+ A+ G
Sbjct: 53 DADDGVAAVVLAGRGRAFCSGVDLTAAEE-VFKGDVKDPAADPVVQMERCRKPIVGAIAG 111
Query: 435 FALGGGCELAMLCDIIYAGEKAKF 506
FA+ G E+A+ CDI+ AG AKF
Sbjct: 112 FAVTAGFEIALACDILVAGRSAKF 135
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 491 RKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPV 670
R + G P G +Q+L R +G ++A E+ LT A AEK GLV+ +
Sbjct: 131 RSAKFIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIVDD 190
Query: 671 EKLLEETIKLAERI 712
++L + I++ E I
Sbjct: 191 TQVLSKAIEVCEAI 204
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +2
Query: 512 PEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEET 691
PE+ +G IPG GGTQRLPR VG KA+E++L EA K GLV V ++L+
Sbjct: 137 PELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLVDAVVSADELISTA 196
Query: 692 IKLAERI 712
A I
Sbjct: 197 CSWALEI 203
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Frame = +3
Query: 264 SNIAAIIITGNEKAFAAGADIKEMQNNTYSS-------NTKQGFLREWEDISNCGKPIIA 422
S++ AI++TG + F+ G DI N ++ ++ + + KP +A
Sbjct: 47 SDVKAIVLTGAKGRFSGGFDINAFDKKPSKDCPVLSFVNKLNIYVVKFMLLPDAPKPSVA 106
Query: 423 AVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
A++G ALGGG EL M+C + A+ G P L P
Sbjct: 107 AIDGVALGGGLELVMVCHARVSTSSAQLGLPELQLGIIP 145
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = +2
Query: 494 KGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVE 673
+ ++ PE+ +G IPG GGTQRLPR VG KA+E++L F A E ++ GLV + +
Sbjct: 129 EAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDALCSPD 188
Query: 674 KLLE 685
+L++
Sbjct: 189 ELIK 192
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +2
Query: 512 PEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLL 682
PE+ +G IPG GGTQRLPR VG +KA+E++L EA ++GLV + + L+
Sbjct: 140 PELQLGVIPGFGGTQRLPRLVGLTKALEMMLLSKPIKGAEAHQLGLVDSLVSADDLV 196
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = +3
Query: 264 SNIAAIIITGNEKAFAAGADIKEMQN--NTYSSNTKQGFLRE---WEDISNCGKPIIAAV 428
+++ AI++TG F+ G DI + K G++ + + KP +AA+
Sbjct: 52 NDVKAIVVTGKGGKFSGGFDISSFGSVQGGKVEQPKVGYISIDIITDTLEAATKPSVAAI 111
Query: 429 NGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
+G ALGGG E+AM C + A+ G P L P
Sbjct: 112 DGLALGGGLEVAMACHARISTPTAQLGLPELQLGVIP 148
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +2
Query: 512 PEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEET 691
PE+ +G IP GGTQRLPR VG +KA+E++L A EA ++ L+ + LL
Sbjct: 136 PELQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLALIDAIVSPNDLLNTA 195
Query: 692 IKLA 703
+ A
Sbjct: 196 CRWA 199
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +3
Query: 264 SNIAAIIITGNEKAFAAGADIKE---MQNNTYSSNTKQGFLR---EWEDISNCGKPIIAA 425
+++ AI++TG F+ G DI +Q N + K ++ + GKP +AA
Sbjct: 48 NDVKAIVVTGKGGVFSGGLDINTFGAIQRNK-AEQLKVDYVSIDVMTNTLEAAGKPSVAA 106
Query: 426 VNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
+NG ALGGG E++M+C + A+ G P L P
Sbjct: 107 INGPALGGGLEISMVCQARISIPTAQLGLPELQLGVIP 144
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Frame = +2
Query: 482 LCRRKGEIRQPEINIGTIPG---------AGGTQRLPRYVGKSKAMEIVLTGNFFDAHEA 634
+C PE + IPG +GGTQRLPR VGKS+A E++ TG FDA EA
Sbjct: 163 ICGENATFSLPETGLAIIPGYVFKMALYFSGGTQRLPRIVGKSRAKELIFTGRRFDAVEA 222
Query: 635 EKMGLV 652
MG V
Sbjct: 223 VTMGKV 228
Score = 51.6 bits (118), Expect = 6e-07
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Frame = +3
Query: 258 ADSNIAAIIITGN-EKAFAAGADIKEM------QNNTYSSNTKQGFLREWEDISNCGKPI 416
AD+ +++ + K F AGAD+KE + + ++ + FL +E +S P
Sbjct: 85 ADATAKVVLLASSVPKVFCAGADLKERRLMSPCEVREFVNSLRSTFL-SFEALSI---PT 140
Query: 417 IAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
IA V G A GGG ELA+ CD+ GE A F P + LA P
Sbjct: 141 IAIVEGAAFGGGLELALSCDLRICGENATFSLPETGLAIIP 181
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 DSNIAAIIITGN-EKAFAAGADIKEMQNNTYSSNTKQGFLREWE---DISNCGKPIIAAV 428
DS+I II+TG ++F +G D + Y G L + I KP+IA V
Sbjct: 113 DSSIGVIILTGKGTQSFCSGGDQALRDADGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMV 172
Query: 429 NGFALGGGCELAMLCDIIYAGEKAKFG 509
G+A+GGG L M+CD+ A + A FG
Sbjct: 173 AGYAVGGGHVLHMVCDLTIAADNAIFG 199
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 524 IGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLA 703
+G+ GT + R VG KA E+ F+ A EA++MGLV+ V P+ L ET+K
Sbjct: 205 VGSFDAGYGTSIMSRLVGPKKAREMWFLSRFYTADEADRMGLVNVVVPLADLERETVKWC 264
Query: 704 ERI 712
+I
Sbjct: 265 RKI 267
>01_06_0729 -
31546464-31546574,31546653-31546694,31546795-31546896,
31547148-31547246,31547522-31547582,31547659-31547807,
31547963-31548048,31548249-31548333,31548642-31548725,
31548820-31548893,31549035-31549095,31549546-31549614,
31549712-31549795,31549893-31549937
Length = 383
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREW---EDISNCGKPIIA 422
++ D + +I G +AF+AG D+K + + R + I K +A
Sbjct: 54 WEKDEDAKLVIFKGAGRAFSAGGDLKMFYEGKSDDSCLEVVYRMYWLCYHIHTYKKTAVA 113
Query: 423 AVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTL 527
VNG +GGG + EK F P +++
Sbjct: 114 LVNGLVMGGGAAMVAPLKFAVVTEKTVFATPEASV 148
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG---FLREW---EDISNCGKP 413
++ D + +I+ G +AF AG D+ + + + + K G F E+ I+ KP
Sbjct: 178 YEEDDGVKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKP 237
Query: 414 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPE 542
++ + G +GGG +++ + F P + L P+
Sbjct: 238 QVSLLTGIVMGGGAGVSIHGRFRVVTDSTVFAMPETALGLFPD 280
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGAD----IKEMQNNT--YSSN-TKQGFLREWEDISNCGK 410
++ D + +I+ G +AF AG D ++ + N++ YS++ + FL + I+ K
Sbjct: 72 YEEDEGVKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKYSAHFFRNEFLLNY-IIATYNK 130
Query: 411 PIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPE 542
P ++ + G +GGG +++ E F P + L P+
Sbjct: 131 PQVSLLTGIVMGGGAGVSIHGRFRVVTESTVFAMPETALGLFPD 174
>01_01_0746 + 5772340-5773083
Length = 247
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 276 AIIITGNEKAFAAGADIKEMQNNTYSSNTKQG--FLREWEDISNCGKPIIAAVNGFALGG 449
A++I G K F+ G D+ + + G F D+ P +AAV G A
Sbjct: 54 ALVIAGEGKYFSNGFDLDWARTVPAELHASMGGAFRGLVADLLALPVPTVAAVTGHAAAA 113
Query: 450 GCELAMLCDII 482
GC LA+ D +
Sbjct: 114 GCALALAHDAV 124
>02_05_0363 - 28297295-28298167
Length = 290
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -1
Query: 463 ASSQPPPRAKPLTAAMMGFPQLEMSSHSRRK 371
ASS PPP A P AA FP+ SRRK
Sbjct: 35 ASSSPPPPAAPPAAAAPAFPRSVSPYVSRRK 65
>05_06_0087 + 25450471-25450827
Length = 118
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 383 FAKETLFCVAAVCIVLHLLNISTSRKSLLVTSDDDGSNVAVGVKSLTAFPSS-TNNGLHR 207
F + +L + V +V L IST+ + TSDDDG + + ++ A S ++ +
Sbjct: 4 FHRLSLAFLLLVVVVAGDLMISTATSMAVGTSDDDGPPIKISMRYANAEESRWLDSWAEK 63
Query: 206 AFSASGG 186
SA GG
Sbjct: 64 TQSAGGG 70
>02_05_0226 +
26971851-26972034,26972734-26972834,26972876-26972978,
26973335-26973477,26973525-26973605,26973929-26974015,
26974097-26974239,26974746-26974896,26974973-26975095,
26975362-26975445,26975531-26975718,26976726-26976900,
26977008-26977129,26977231-26977310,26977532-26977590,
26977921-26978075,26978680-26978858,26980050-26980162,
26980243-26980413,26980552-26980680,26980756-26980856,
26980942-26981059,26981739-26981818,26983230-26983302,
26983865-26983950,26984025-26984076,26984221-26984352,
26984560-26984628,26984912-26985004,26985806-26985901,
26986710-26986808,26986894-26986986,26987459-26987608,
26988391-26988549
Length = 1323
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = -3
Query: 446 PKSETINSGNDGFPTVGDVLPFAKETLFCVAAVCIVLHLLNISTSR----KSLLVTSDDD 279
P + + + +DG P + DV+ + + + I +H+ ST S +V +DDD
Sbjct: 67 PAAAGLQTTSDGKPKILDVIDWCCNP----SEIPIHIHVFKCSTGSGDVDTSKVVKADDD 122
Query: 278 GSNVAVGVKSLTAFPSSTN 222
GS V LT PS N
Sbjct: 123 GSIVGASGTHLTINPSWKN 141
>11_01_0712 -
5844291-5844474,5844722-5844777,5844861-5844959,
5845056-5845137,5845626-5845760,5845844-5846011,
5846127-5846310,5848114-5848189
Length = 327
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 438 ALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPEPEAPSVFPDTL 575
A GC+ + D++ + ++ K PR T+ P+ + S P L
Sbjct: 7 ARSSGCDQVAVVDLVDSDDECKNKRPRRTIKPAARNVSKSALPSGL 52
>08_01_0421 - 3735155-3736067,3736154-3736176
Length = 311
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 514 RDQHWHHPRSRRHPASSQIRW 576
RDQ HHPR RR S + W
Sbjct: 105 RDQVTHHPRGRRAHRSGPLEW 125
>10_08_0871 -
21181798-21181917,21182024-21182065,21182162-21182191,
21182227-21182328,21182414-21182512,21182824-21182884,
21183447-21183568,21183673-21183758,21183880-21183964,
21184125-21184208,21184292-21184371,21184722-21184785,
21184859-21184927,21185263-21185343,21185438-21185578
Length = 421
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADI---KEMQNNTYSSNTKQGFLREWEDISNCG---KP 413
++ + +I +++ G+ +AF AG D+ ++ + K F + I G KP
Sbjct: 85 WEDNPDIGFVMMKGSGRAFCAGGDVVRLHQLISEGKLDECKDFFKTLYSFIYVLGTYLKP 144
Query: 414 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPEPEA 551
+A ++G +GGG +++ ++ F P + P+ A
Sbjct: 145 HVAILDGVTMGGGGGVSIPGTFRIVTDRTVFATPEVHIGFHPDAAA 190
>09_04_0597 -
18859601-18859818,18860914-18861083,18861250-18861303,
18862759-18863284,18864465-18864663,18866787-18866852,
18866999-18867300,18867394-18867634,18867716-18867973,
18868076-18868207
Length = 721
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 486 AGEKAKFGNPRSTLAPSPEPEAPSVFPDTLASRKQWR 596
AGE + P+ +AP P+P P+ F L QWR
Sbjct: 288 AGEAPYYQWPQHCMAPPPQPPLPAFF---LVLAAQWR 321
>07_01_0139 -
1014952-1015165,1015271-1015350,1015420-1015629,
1015925-1016044,1016650-1016709,1017129-1017204,
1018189-1018352,1018428-1018490,1018815-1018902,
1018997-1019647,1019965-1020449
Length = 736
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 466 IASSQPPPRAKPLTAAMMGFP 404
+A+S PPPR + T+A +G P
Sbjct: 83 VANSSPPPRGRASTSAAVGHP 103
>04_04_1493 -
33977964-33978176,33978254-33978347,33978452-33978855,
33978944-33979818,33980212-33980293
Length = 555
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 273 AAIIITGNEKAFA-AGADIK--EMQNNTYSSNTKQGFLREWEDISNCGKPIIA 422
+A ++ G AF G D ++QN +++ N LREWE S C PIIA
Sbjct: 89 SATVLLGGRPAFLYTGRDAGGVQVQNVSFAKNPLDPLLREWEKPS-C-NPIIA 139
>04_03_0070 + 10677677-10679989
Length = 770
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 608 LSTRSPLLSTCQRIWEDAGCLRLRGWCQ 525
+ PL+ C +WED ++RGWC+
Sbjct: 527 MEAERPLVGQCLPLWEDLRG-KVRGWCR 553
>01_03_0105 + 12604125-12604583
Length = 152
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 472 HSIASSQP-PPRAKPLTAAMMGFPQLEMSSHSRRKP 368
H + SQP PPRAK + + E + HSRR+P
Sbjct: 65 HKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQP 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,127,834
Number of Sequences: 37544
Number of extensions: 527603
Number of successful extensions: 1977
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1971
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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