Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00729
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 6e-30
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 60 2e-09
SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77) 43 3e-04
SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_32164| Best HMM Match : ECH (HMM E-Value=0.02) 39 0.005
SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06) 36 0.033
SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 32 0.40
SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 29 3.8
SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2) 29 3.8
SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07) 29 3.8
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 28 8.7
SB_35683| Best HMM Match : Amino_oxidase (HMM E-Value=0.0092) 28 8.7
>SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 128 bits (308), Expect = 6e-30
Identities = 58/96 (60%), Positives = 68/96 (70%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVN 431
F+AD N+ I++TG +AFAAGADIKEMQ TY FL W +S C KP+IAAVN
Sbjct: 80 FEADKNVGCIVLTGCGRAFAAGADIKEMQPLTYQKCLSGDFLGHWTRVSKCTKPVIAAVN 139
Query: 432 GFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
GFALGGGCELAM+CDIIYA +KAKFG P + P
Sbjct: 140 GFALGGGCELAMMCDIIYASDKAKFGQPEILIGTIP 175
Score = 91.1 bits (216), Expect = 8e-19
Identities = 47/73 (64%), Positives = 54/73 (73%)
Frame = +2
Query: 494 KGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVE 673
K + QPEI IGTIPGAGGTQRL R VGKS AME+VLTG+ +A A K GLVSKVFP +
Sbjct: 161 KAKFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDPINADHALKAGLVSKVFPAD 220
Query: 674 KLLEETIKLAERI 712
L+ IK AE+I
Sbjct: 221 DLVPNAIKTAEKI 233
Score = 36.7 bits (81), Expect = 0.019
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 80 SATSQASIKFYSTA--SYENIKVEVVGSKKNVGLIQLNRPK 196
SA+S + + +A SYE+I E G NVG IQLNRPK
Sbjct: 20 SASSLRYTRAFCSAKKSYEHILTETKGESNNVGFIQLNRPK 60
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +2
Query: 494 KGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLV 652
K + PE+ +G +PGAGGTQRLPR VG +++++LTG A +A+KMGLV
Sbjct: 35 KTVLSAPEVMLGLLPGAGGTQRLPRLVGLPDSLDMMLTGKNIRAQKAKKMGLV 87
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 408 KPIIAAVNGFALGGGCELAMLC 473
KP++AA+ G +GGG ELA+ C
Sbjct: 4 KPVVAAIMGTCMGGGLELALSC 25
>SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED--ISNCGKPIIAA 425
F+ D ++ ++TG F AG+D++E+ + K + D ++ +P+I A
Sbjct: 67 FEIDDSVNVAVLTGKGGNFCAGSDLQELAQKDAETYMKSFYPPGEGDGPMAEANQPVIGA 126
Query: 426 VNGFALGGGCELAMLCDIIYAGEKAKFG 509
+ G+A+GGG ELA+LCD+ E + FG
Sbjct: 127 IQGYAVGGGLELALLCDLRVCEEDSVFG 154
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +2
Query: 545 GGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERI 712
GG RLP +G S+A+++++TG A EA ++GLV++V P K +EE IK+AE+I
Sbjct: 167 GGAVRLPYLIGLSRALDLIMTGRAVKAQEAIEIGLVNRVVPKGKAIEEAIKIAEKI 222
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 51.6 bits (118), Expect = 6e-07
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +3
Query: 267 NIAAIIITGNEKAFAAGADIKEM--QNNTYSSNTK---QGFLREWEDISNCGKPIIAAVN 431
++ ++I G K F +G D + + NTK + F E I +C KPIIAAVN
Sbjct: 293 DVNVVVIIGAGKYFCSGLDYTCVFTRGPQQKQNTKLLVERFKLLVEVIIHCSKPIIAAVN 352
Query: 432 GFALGGGCELAMLCDIIYAGEK 497
G A G G L LCDI+Y EK
Sbjct: 353 GDAKGFGTSLVALCDIVYVCEK 374
>SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +2
Query: 494 KGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVE 673
K + P +NIG G L R V + AME++LTG A EA + GLVS+V P +
Sbjct: 112 KSQFATPGVNIGLFCSTPGVA-LARAVPRKVAMEMLLTGRPITAGEALRHGLVSRVVPED 170
Query: 674 KLLEETIKLAERI 712
+L E +++ +I
Sbjct: 171 QLENEVNRISSKI 183
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 414 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNP 515
+I G A GC+L CD+ A +K++F P
Sbjct: 85 LILLSTGLATAAGCQLVASCDVAVASDKSQFATP 118
>SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77)
Length = 393
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 408 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 506
KP+I A+ G+A+GGG ELA+LCD+ E + F
Sbjct: 358 KPVIGAIQGYAVGGGLELALLCDLRVCEEDSVF 390
>SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +3
Query: 408 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPEPEAPSVFP 566
KP++AA+NG A+G + L D+++A ++A F P L SPE + FP
Sbjct: 168 KPLVAAINGPAVGISVTVLGLFDLVFATDRATFHTPFMELGQSPEGCSSFTFP 220
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 500 EIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEK 676
EI+ + +G PG GG RL + VG+ KAMEI+L E+ GLV P +K
Sbjct: 1016 EIKFVQARMGLTPGWGGGARLVQLVGRQKAMEILLQCKSMKLEESLMCGLVDGELPNDK 1074
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 467 AVRYHLCRRKGEIRQPEINIGTI--PGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEK 640
A Y + I PE+++G P GT L VG+++A +I+ FDA +A
Sbjct: 1534 ACDYSVMASDFRIGLPELSLGLYFAPWMAGT--LSNAVGRNRAEKIIYNAQVFDADDAAG 1591
Query: 641 MGLVSKVFPVEKLLEETIK 697
+GL+ KV V+ ++ ET K
Sbjct: 1592 IGLIDKVTHVDAVMTETRK 1610
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 306 FAAGADIKEMQNNTYSS--NTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDI 479
F AG D+KE+ S ++ F W + +AA+ G A+ GGC L++ CD
Sbjct: 1478 FCAGLDLKEVLALRKSKLVTFRKTFQDMWSRLYGSRLVTMAAIKGHAIAGGCVLSLACDY 1537
Query: 480 IYAGEKAKFGNPRSTL 527
+ G P +L
Sbjct: 1538 SVMASDFRIGLPELSL 1553
>SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Frame = +3
Query: 255 DADSNIAAIIITGN-EKAFAAGAD-IKEMQNNTYSSNTKQGFL--REWEDI--SNCGKPI 416
+++++ +I+T + K F+AG D +KE+ Y S+ K+ F+ R ++D+ G +
Sbjct: 27 ESNTDCRGLIVTSSMPKVFSAGLDLVKEL----YKSDEKRLFVFWRRFQDVWMQLYGSRL 82
Query: 417 --IAAVNGFALGGGCELAMLCD 476
+AAVNG A+ GGC LA CD
Sbjct: 83 ATVAAVNGHAVAGGCLLAAACD 104
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +2
Query: 551 TQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEE 688
+Q + VG S I G A EA+K+GLV V P EKL+ E
Sbjct: 130 SQNIVNLVGTSTGERICALGTMLSAEEAQKIGLVDHVVPQEKLMAE 175
>SB_32164| Best HMM Match : ECH (HMM E-Value=0.02)
Length = 280
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +2
Query: 473 RYHLCRRKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLV 652
RY + K PE IG P GG LPR GK + + LTG + + G+
Sbjct: 130 RYRVATEKTTFAMPETAIGFFPDVGGAHALPRLSGK-LGLFLALTGQRLKGYNVKLAGIA 188
Query: 653 SKVFPVEK 676
+ +EK
Sbjct: 189 THYVTLEK 196
>SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06)
Length = 149
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 393 ISNCGKPIIAAVNGFALGGGCELAMLCDI 479
I C KP+IAAV+ +GGG ++ CDI
Sbjct: 35 IEKCEKPVIAAVHSACVGGGVDMICACDI 63
>SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 276 AIIITGNEKAFAAGADI---KEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALG 446
+++++ + AGADI K +N + +G + ++ + + KP++AA+ G +G
Sbjct: 83 SVLMSAKPGCWIAGADINMLKAGENAAQVTEIAKGGQQVYQFLEDSPKPVVAAIMGTCMG 142
Query: 447 GGCE 458
GG E
Sbjct: 143 GGLE 146
>SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 387 EDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPEPEAPSVFP 566
+ I + KPI+A ++ A G G +L +CD++ ++A G+P + P FP
Sbjct: 581 QTIQHFPKPIVATISKPAHGLGAQLVAMCDMVC--DEASLGSPIDVASAKANGIVPYCFP 638
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 466 CCAISSMPAKRRNSATRDQHWHHPRSRRHPASSQIRWQVESNG 594
CC ++S+P R N +T Q + RRH A + V +NG
Sbjct: 1591 CCDVTSVPYIRTNHSTPFQPTNQNAPRRHDAQTTFTTHVSNNG 1633
>SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 360 TKQGFLREWEDISNCGKPIIAAVNGFAL 443
T++ LR ++DIS C + I VNGF++
Sbjct: 30 TRERLLRSYQDISECNRRIHGPVNGFSI 57
>SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1157
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -2
Query: 639 FSAS*ASKKFPVNTISIAFDLPTYLGRRWVPPAPGM----VPMLISGCRISPFR 490
F+ S A KK + +IS+ LG + PP PG+ VP++++ R P+R
Sbjct: 603 FTPSSARKKSTIPSISLESGETFQLGVLFTPPRPGLFIAHVPVILNDDRDHPYR 656
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 496 FSPA*MISHSIASSQPPPRAKPLTAAMMGFPQLEMSSHSRRKPCFVLL 353
F+ A + SH + SQP P + P A++ ++H KPCF L
Sbjct: 458 FNQALLHSHP-SPSQPSPVSHPPAQALLHTSHPSPATHPSPKPCFTFL 504
>SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2)
Length = 276
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -3
Query: 635 RLHEHQRSFLSTRS---PLLSTCQRIWEDAGCLR-LRGWCQ 525
R+H R F++ S PLLSTCQR+ C R L CQ
Sbjct: 182 RVHSSMRPFVNASSRQLPLLSTCQRVLSST-CKRVLSSTCQ 221
>SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07)
Length = 827
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 522 TLAPSPEPEAPSVFPDTLASRKQWRSC*QETSLMLMKPRKWVLSVKYSQWKNF*KKP 692
TL P PEPE+P D + S KQ S ++ L+ KP++ + YS N KP
Sbjct: 367 TLEP-PEPESPEKVSDPIQSSKQ--SFQKDDLLLEDKPKEELNPEGYSSQTNIPTKP 420
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 19 CRYCNSCFAGKECTEQVQSGIRN-KPSIYKV 108
C YC++C GK+ + QS I N KP I V
Sbjct: 321 CDYCDACLKGKDKRLEFQSLIDNYKPDIVNV 351
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -2
Query: 414 WVSHSWRCPPIREGNPVLCCCCMYCF 337
W + C + G CCCC +CF
Sbjct: 496 WCKALFFCCGVITGCYFCCCCCFFCF 521
>SB_35683| Best HMM Match : Amino_oxidase (HMM E-Value=0.0092)
Length = 729
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 338 KQYIQQQHKTGFPSRMGGHLQLWE 409
K Y+ + + TGF +RM G+ W+
Sbjct: 613 KDYVTEANNTGFSTRMHGYFDEWD 636
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,656,807
Number of Sequences: 59808
Number of extensions: 553486
Number of successful extensions: 1562
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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