Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00729
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 127 7e-30
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 110 8e-25
AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa hy... 66 2e-11
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 54 8e-08
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 54 8e-08
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 54 8e-08
Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical p... 54 1e-07
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 52 3e-07
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical... 47 2e-05
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 39 0.004
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 39 0.004
U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical p... 37 0.017
Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81547-4|CAB04458.1| 368|Caenorhabditis elegans Hypothetical pr... 26 3.1
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81132-3|CAB03434.1| 365|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 127 bits (307), Expect = 7e-30
Identities = 57/95 (60%), Positives = 71/95 (74%)
Frame = +3
Query: 255 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNG 434
D D ++ AI+ITG+E+AFAAGADIKEM NN +++ FL W +S+ KP+IAAVNG
Sbjct: 75 DTDKSVGAIVITGSERAFAAGADIKEMTNNEFATTFSGSFLSNWTAVSDVKKPVIAAVNG 134
Query: 435 FALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
FALGGG ELAM+CDIIYAGEKA+FG P + P
Sbjct: 135 FALGGGNELAMMCDIIYAGEKARFGQPEINIGTIP 169
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = +2
Query: 494 KGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVE 673
K QPEINIGTIPGAGGTQR R GKS AME+ LTGN A EA++ G+VSK+FP +
Sbjct: 155 KARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKIFPAD 214
Query: 674 KLLEETIKLAERI 712
+++ E +KL E+I
Sbjct: 215 QVVGEAVKLGEKI 227
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 56 VLNKCKVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPK 196
++ K+ + +Q + +S+ + E IK+E VG K+NV LI+LNRPK
Sbjct: 8 LVRNAKLCANVNQMQVAAFSSKAPEMIKIEKVGEKQNVALIKLNRPK 54
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 110 bits (265), Expect = 8e-25
Identities = 49/95 (51%), Positives = 66/95 (69%)
Frame = +3
Query: 255 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNG 434
+ D + I++TG+EKAFAAGADIKEM ++ + + W+ +S+ KP+IAAVNG
Sbjct: 43 EKDQSYHVIVLTGSEKAFAAGADIKEMAKLEFADVFENDYFTNWDTLSHITKPVIAAVNG 102
Query: 435 FALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
FALGGG ELA++CDI+YAGE A FG P T+ P
Sbjct: 103 FALGGGTELALMCDIVYAGENAIFGQPEITIGTIP 137
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/68 (66%), Positives = 54/68 (79%)
Frame = +2
Query: 509 QPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEE 688
QPEI IGTIPG GGTQR PRYV KS AMEI L+G+ A EA++ GLVSKVFPV++L+ E
Sbjct: 128 QPEITIGTIPGLGGTQRWPRYVSKSVAMEICLSGDRLGAQEAKEDGLVSKVFPVQQLVGE 187
Query: 689 TIKLAERI 712
+ LA+RI
Sbjct: 188 AVLLADRI 195
>AF045646-15|AAK29838.1| 284|Caenorhabditis elegans Enoyl-coa
hydratase protein 5 protein.
Length = 284
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +3
Query: 261 DSNIAAIIITGN-EKAFAAGADIKEMQNNTYSSNTK--QGFLREWEDISNCGKPIIAAVN 431
D +I+ + F +GAD+KE + + T+ G + D+ +P+IAA++
Sbjct: 74 DPKTRVVILNSKCDNVFCSGADLKERKTMSQQEATRFVNGLRDSFTDVERLPQPVIAAID 133
Query: 432 GFALGGGCELAMLCDIIYAGEKAKFG 509
GFALGGG ELA+ CDI A +KAK G
Sbjct: 134 GFALGGGLELALACDIRVASQKAKMG 159
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +2
Query: 434 FRSWGWL*AGNAVRYHLCRRKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGN 613
F G L A + +K ++ E IPGAGG+QRL R VG +KA E++ T
Sbjct: 135 FALGGGLELALACDIRVASQKAKMGLVETKWALIPGAGGSQRLYRIVGVAKAKELIYTAE 194
Query: 614 FFDAHEAEKMGLVSKVF---PVEKLLEETIKLAER 709
+ +A K+G+V+ V P+EK LE K+ R
Sbjct: 195 VLNGADAAKLGVVNHVVEANPIEKSLEIARKIIPR 229
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +2
Query: 491 RKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 661
+K + PE+ +G +PGAGGTQRLP+ +++ LTG A +A+K+G+V +V
Sbjct: 183 KKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 239
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +3
Query: 258 ADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIA 422
+D +I +I++ +G +F AGADI+ ++ ++ T+ RE ++ I KP++A
Sbjct: 99 SDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQKPVVA 157
Query: 423 AVNGFALGGGCELAMLC 473
A+ G +GGG ELA+ C
Sbjct: 158 AIMGSCMGGGLELALAC 174
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +2
Query: 491 RKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 661
+K + PE+ +G +PGAGGTQRLP+ +++ LTG A +A+K+G+V +V
Sbjct: 157 KKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 213
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +3
Query: 258 ADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIA 422
+D +I +I++ +G +F AGADI+ ++ ++ T+ RE ++ I KP++A
Sbjct: 73 SDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQKPVVA 131
Query: 423 AVNGFALGGGCELAMLC 473
A+ G +GGG ELA+ C
Sbjct: 132 AIMGSCMGGGLELALAC 148
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +2
Query: 491 RKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 661
+K + PE+ +G +PGAGGTQRLP+ +++ LTG A +A+K+G+V +V
Sbjct: 183 KKTLLSLPEVMLGLLPGAGGTQRLPKLTTVQNVLDLTLTGKKIKADKAKKIGIVDRV 239
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +3
Query: 258 ADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIA 422
+D +I +I++ +G +F AGADI+ ++ ++ T+ RE ++ I KP++A
Sbjct: 99 SDESIKSIVVMSGKPNSFVAGADIQMIKAEGTATATET-LSREGQEQFFRIEKSQKPVVA 157
Query: 423 AVNGFALGGGCELAMLC 473
A+ G +GGG ELA+ C
Sbjct: 158 AIMGSCMGGGLELALAC 174
>Z77660-10|CAB01180.1| 283|Caenorhabditis elegans Hypothetical
protein F38H4.8 protein.
Length = 283
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +3
Query: 255 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLR---EWEDISNCGKPIIAA 425
D + ++II N K+F+AG ++KE+ + S + F I N P+IA
Sbjct: 58 DKIEKVRSVIIAHNGKSFSAGHELKELTTESGSDKHNEIFNTCGDMMNFIRNMKVPVIAE 117
Query: 426 VNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTL 527
VNG A G +L CD++ AG+ +KF P L
Sbjct: 118 VNGTAAAAGLQLVASCDVVVAGKSSKFLVPGQKL 151
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +2
Query: 545 GGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERIGT 718
GGT RLPR +G +A++++LTG A EA + GLV+++ K +EE +KL + I +
Sbjct: 145 GGTVRLPRVIGLGRALDMILTGREVGAQEALQWGLVNRISDEGKAVEEAVKLGKLIAS 202
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWE----DISNCGKPII 419
F+ DS + ++ G F AG D++ + + + F ++ I KP+I
Sbjct: 44 FNEDSTMKTAVLYGEGGTFCAGYDLESVSKAEHQE-VSEDFCDKYRYMGPSIMKIKKPLI 102
Query: 420 AAVNGFALGGGCELAMLCDIIYAGEKAKFG 509
AA+ GFA+ GG EL+++ D+ + AKFG
Sbjct: 103 AAIEGFAVAGGLELSLMADLRVSSPSAKFG 132
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 512 PEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 661
PE+ +G +PG GGTQRLP+ +++ LTG A++A K+G+V +V
Sbjct: 164 PEVTLGIMPGDGGTQRLPKLTTVQNVLDLTLTGKRIKANKAMKIGIVDRV 213
Score = 48.8 bits (111), Expect = 4e-06
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Frame = +3
Query: 258 ADSNIAAIII-TGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED----ISNCGKPIIA 422
+D ++ AI++ +G +F AGADI+ + ++ LRE + I KPI+A
Sbjct: 73 SDQSVKAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSN-LLREGQKQLLTIELSQKPIVA 131
Query: 423 AVNGFALGGGCELAMLCD--IIYAGEKAKFGNPRSTLAPSP 539
A+ G +GGG E+A+ C I +K G P TL P
Sbjct: 132 AIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMP 172
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +3
Query: 261 DSNIAAIIITGNE-KAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGF 437
D +IA ++ TG + K + AG+D + +T + + G+ + + KPIIA VNG
Sbjct: 46 DDDIAFVVFTGGKGKYYCAGSDFSPAELSTLTDIQEHGYKLFVDILIAFPKPIIALVNGH 105
Query: 438 ALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPEPEAPSVFPDTLASRK 587
A+G + + D + A + A F P + + PE + P + +K
Sbjct: 106 AVGVSVTMLGVMDAVIAIDTATFATPFADIGVCPEACSSYTLPRIMGHQK 155
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 512 PEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEET 691
P +IG P A + LPR +G KA +++ F AHEA GLV+++ P ++
Sbjct: 131 PFADIGVCPEACSSYTLPRIMGHQKAAALMMFSEKFTAHEAHIAGLVTQILPAATFEKDA 190
Query: 692 IKLAER 709
K+ +R
Sbjct: 191 KKIIDR 196
>AF125459-14|AAD12843.1| 297|Caenorhabditis elegans Hypothetical
protein Y25C1A.13 protein.
Length = 297
Score = 46.8 bits (106), Expect = 2e-05
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 16/98 (16%)
Frame = +3
Query: 261 DSNIAAIIITGNEKAFAAGADIKE--------MQNNTYSSNTK----QGFLREWED---- 392
D +III+G KAF AG DI +Q++T K + F+ E +D
Sbjct: 68 DPKCRSIIISGEGKAFCAGIDIAHGLSDILRIIQDDTIEVGRKGRLVRKFIGEIQDCYTA 127
Query: 393 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 506
+ C KPIIA+++ LG G +L CDI A + A F
Sbjct: 128 LERCPKPIIASIHSHCLGAGIDLITACDIRVASQDAIF 165
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 44.8 bits (101), Expect = 6e-05
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Frame = +3
Query: 261 DSNIAAIIITGNEKAFAAGADI---KEMQNNTYS-----SNTKQGFLREWEDIS-NCGKP 413
D + + +IT N + AG D+ K T +NT + ++++ + N KP
Sbjct: 169 DKSTSITVITANGSYYCAGNDLTNFKAAAGGTKEQIADMANTAKVIMKDYVNAYINHEKP 228
Query: 414 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPEPEAPSVFPDTLAS 581
+IA +NG A+G + + D + A +KA F P + L SPE + FP + S
Sbjct: 229 LIALINGPAVGIAVTVLGMFDYVIATDKASFHTPFAPLGQSPEGVSSYTFPLIMGS 284
>U53339-3|AAA96199.1| 278|Caenorhabditis elegans Hypothetical
protein F58A6.1 protein.
Length = 278
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Frame = +3
Query: 246 Q*FDADSNIAAIIITGNEKAFAAGADIKE---MQNNTYSSNTKQG--------FL-REWE 389
Q D D +I+ G K F +G D+ E + + ++G F+ +++
Sbjct: 47 QLIDEDPECRVVILQGEGKHFCSGLDLSEVTFLNGEEADDSARRGRSILRTIKFMQKQFT 106
Query: 390 DISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKA 500
I C KP+I A++G+ LG ++A CD+ A + A
Sbjct: 107 YIDECSKPVILAMHGYCLGAALDIATACDVRVATKDA 143
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +3
Query: 246 Q*FDADSNIAAIIITGN-EKAFAAGADI-------KEMQNNTYSSNTKQGFLREW---ED 392
Q +++ S++ +I+ G+ +KAF AG D+ K+ ++ + K F E+
Sbjct: 48 QAWNSSSDVDLVILKGSGDKAFCAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHL 107
Query: 393 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPE 542
I K + ++G +GGGC L++ A EK P + L P+
Sbjct: 108 IGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPD 157
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 473 RYHLCRRKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLV 652
R+ + K + PE +G P GG+ L R G + M + LTG +A GL
Sbjct: 135 RFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKG-NLGMYLALTGYRLLGADAFHAGLA 193
Query: 653 S 655
+
Sbjct: 194 T 194
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +3
Query: 246 Q*FDADSNIAAIIITGN-EKAFAAGADI-------KEMQNNTYSSNTKQGFLREW---ED 392
Q +++ S++ +I+ G+ +KAF AG D+ K+ ++ + K F E+
Sbjct: 71 QAWNSSSDVDLVILKGSGDKAFCAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHL 130
Query: 393 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPE 542
I K + ++G +GGGC L++ A EK P + L P+
Sbjct: 131 IGTLNKQYVCLIDGIVMGGGCGLSVNGRFRVATEKTMLAMPETALGLFPD 180
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +2
Query: 473 RYHLCRRKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLV 652
R+ + K + PE +G P GG+ L R G + M + LTG +A GL
Sbjct: 158 RFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKG-NLGMYLALTGYRLLGADAFHAGLA 216
Query: 653 S 655
+
Sbjct: 217 T 217
>U88308-10|AAB42326.2| 268|Caenorhabditis elegans Hypothetical
protein C32E8.9 protein.
Length = 268
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +3
Query: 237 EGSQ*FDADSNIAAIIITGNEKAFAAGAD---IKEMQNNTYSSNTKQGFLREWEDISNCG 407
E ++ F D N A I+++G K+F +GAD IK++ + + + +
Sbjct: 59 EHTELFSDDQN-AIIVVSGVGKSFCSGADLGLIKDISDQKLGVQMFEYMSSILSLLHSSP 117
Query: 408 KPIIAAVNGFALGGGCELAMLCD--IIYAGEKAKFGNPRSTLAPS 536
IA ++G ALGG E+ D I ++G K F + + PS
Sbjct: 118 AISIAKIHGHALGGATEICSSTDIRIAHSGSKIAFFQSKMGIVPS 162
>Z70783-5|CAA94855.1| 121|Caenorhabditis elegans Hypothetical
protein ZK856.7 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 255 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDIS--NCGKPI 416
D D + I+ N K + +K++Q NT+ + L++WE + + GKP+
Sbjct: 26 DTDKKFSGQIVASNGKKSERWSYLKKLQKNTFQQKADECGLKDWEITTWDDAGKPV 81
>Z81547-4|CAB04458.1| 368|Caenorhabditis elegans Hypothetical
protein F53F8.5 protein.
Length = 368
Score = 26.2 bits (55), Expect(2) = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 490 AKRRNSATRDQHWHH-PRSRRHPASSQ 567
A +S++R H HH PR RH SS+
Sbjct: 322 ASAPSSSSRSAHHHHQPRHHRHDTSSR 348
Score = 21.4 bits (43), Expect(2) = 3.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 352 AATQNRVSFANGRTSPTV 405
A + R+S+++GR S TV
Sbjct: 298 APVRQRISYSSGRLSSTV 315
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 629 HEHQRSFLSTRSPLLSTCQRIW 564
H H F++T+ PL +TC+ W
Sbjct: 1230 HGHPHRFIATQGPLDNTCEDFW 1251
>Z81132-3|CAB03434.1| 365|Caenorhabditis elegans Hypothetical
protein T26E4.4 protein.
Length = 365
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 105 SFIAQHHTRTSRLRWSAPRRMSDSFS*TARSTECSMQTIVC 227
SF HH R+ W AP +M+ + T ++E I+C
Sbjct: 180 SFKYFHHLRSEIREWLAPSKMAKLAAETVLTSELKEDLIIC 220
>Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical
protein C50H2.5 protein.
Length = 265
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 572 VGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAER 709
+GK++A+ L GN FD+ E + G K L+E K AE+
Sbjct: 65 LGKTQAVLCFLKGNHFDSQEIIRRGFYDKRH--HAFLQELFKKAEK 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,118,857
Number of Sequences: 27780
Number of extensions: 410909
Number of successful extensions: 1521
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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