Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00729
(718 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP... 63 2e-10
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat... 62 4e-10
At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar t... 62 4e-10
At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family pr... 62 5e-10
At1g60550.1 68414.m06816 naphthoate synthase, putative / dihydro... 55 5e-08
At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family pr... 53 2e-07
At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolas... 41 7e-04
At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolas... 40 0.002
At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas... 39 0.003
At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family pr... 39 0.003
At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family pr... 38 0.007
At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family pr... 37 0.012
At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family pr... 31 0.76
At5g56110.1 68418.m07000 myb family transcription factor contain... 30 1.8
At1g71740.1 68414.m08292 hypothetical protein 29 3.1
At3g08760.1 68416.m01018 protein kinase family protein contains ... 29 4.1
At4g15820.1 68417.m02407 wound-responsive protein-related contai... 28 5.4
At5g22440.1 68418.m02617 60S ribosomal protein L10A (RPL10aC) 28 7.1
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 28 7.1
At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family pr... 28 7.1
At3g22570.1 68416.m02852 protease inhibitor/seed storage/lipid t... 28 7.1
At2g27530.2 68415.m03331 60S ribosomal protein L10A (RPL10aB) 28 7.1
At2g27530.1 68415.m03330 60S ribosomal protein L10A (RPL10aB) 28 7.1
At2g02560.1 68415.m00195 TIP120 protein, putative similar to TBP... 28 7.1
At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) fa... 27 9.4
At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containi... 27 9.4
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 27 9.4
At1g76870.1 68414.m08945 hypothetical protein 27 9.4
>At3g06860.1 68416.m00814 fatty acid multifunctional protein (MFP2)
identical to fatty acid multifunctional protein (AtMFP2)
GB:AF123254 [gi:4337027] (Arabidopsis thaliana) (fatty
acid beta-oxidation); contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 725
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +2
Query: 512 PEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLL 682
PE+ +G IPG GGTQRLPR VG +KA+E++LT A E +GL+ V P +L+
Sbjct: 138 PELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPAELV 194
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +3
Query: 264 SNIAAIIITGNEKAFAAGADIK---EMQNNTYSSNTKQGFLRE---WEDISNCGKPIIAA 425
+++ AI+ITG + F+ G DI EMQ K G++ + + KP +AA
Sbjct: 50 NDVKAIVITGAKGRFSGGFDISGFGEMQKGNVKE-PKAGYISIDIITDLLEAARKPSVAA 108
Query: 426 VNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
++G ALGGG ELAM C + A+ G P L P
Sbjct: 109 IDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIP 146
>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
acid multifunctional protein (AIM1) identical to
gi:4337025; contains Pfam profiles PF02737
(3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
PF00378 (enoyl-CoA hydratase/isomerase family protein),
PF00725 (3-hydroxyacyl-CoA dehydrogenase)
Length = 721
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +2
Query: 494 KGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVE 673
K ++ PE+ +G IPG GGTQRLPR VG +KA +++L + E K+GL+ + P
Sbjct: 129 KAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVPPG 188
Query: 674 KLLEETIKLA 703
+L + K A
Sbjct: 189 DVLSTSRKWA 198
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Frame = +3
Query: 264 SNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDIS---------NCGKPI 416
+++ AI++ GN F+ G DI N + K G L ++S + KP+
Sbjct: 48 NDVKAIVLIGNNGRFSGGFDI-----NVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPV 102
Query: 417 IAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSP 539
+AAV G ALGGG ELAM C A KA+ G P TL P
Sbjct: 103 VAAVEGLALGGGLELAMACHARVAAPKAQLGLPELTLGVIP 143
>At4g16800.1 68417.m02537 enoyl-CoA hydratase, putative similar to
AU-binding protein/Enoyl-CoA hydratase [Homo sapiens]
GI:780241, [Mus musculus]GI:6840920; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 229
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/77 (40%), Positives = 44/77 (57%)
Frame = +2
Query: 482 LCRRKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKV 661
+C PE + IPGAGGTQRL R VG+S + E++ TG DA EA GLV+
Sbjct: 92 ICGENAVFGLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDAIEAANKGLVNIC 151
Query: 662 FPVEKLLEETIKLAERI 712
+ E+ I++A++I
Sbjct: 152 VTAGEAHEKAIEMAQQI 168
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +3
Query: 306 FAAGADIKEMQNNTYSS-NTKQGFLRE-WEDISNCGKPIIAAVNGFALGGGCELAMLCDI 479
F AGAD+KE + + S +T LR + I P IAA+ G ALGGG E+A+ CD+
Sbjct: 31 FCAGADLKERRTMSPSEVHTYVNSLRYMFSFIEALSIPTIAAIEGAALGGGLEMALACDL 90
Query: 480 IYAGEKAKFGNPRSTLAPSP 539
GE A FG P + LA P
Sbjct: 91 RICGENAVFGLPETGLAIIP 110
>At4g16210.1 68417.m02460 enoyl-CoA hydratase/isomerase family
protein similar to 3-hydroxybutyryl-CoA dehydratase
(Crotonase) from Clostridium acetobutylicum [SP|P52046],
FadB1x (enoyl-CoA hydratase) from Pseudomonas putida
[GI:13310130]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 265
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 255 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNG 434
D+D ++ +I TG+ ++F +G D+ ++ + + K + KPII A+NG
Sbjct: 49 DSDESVQVVIFTGSGRSFCSGVDLTAAES-VFKGDVKDPETDPVVQMERLRKPIIGAING 107
Query: 435 FALGGGCELAMLCDIIYAGEKAKF 506
FA+ G ELA+ CDI+ A AKF
Sbjct: 108 FAITAGFELALACDILVASRGAKF 131
>At1g60550.1 68414.m06816 naphthoate synthase, putative /
dihydroxynaphthoic acid synthetase, putative / DHNA
synthetase, putative contains similarity to MENB from
Escherichia coli [SP|P27290], Bacillus subtilis
[SP|P23966]; contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 337
Score = 54.8 bits (126), Expect = 5e-08
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Frame = +3
Query: 261 DSNIAAIIITGN-EKAFAAGADIKEMQNNTYSSNTKQGFLREWE---DISNCGKPIIAAV 428
DS++ II+TG KAF +G D + Y+ G L + I KP+IA V
Sbjct: 119 DSSVGVIILTGKGTKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMV 178
Query: 429 NGFALGGGCELAMLCDIIYAGEKAKFG 509
G+A+GGG L M+CD+ A + A FG
Sbjct: 179 AGYAVGGGHILHMVCDLTIAADNAIFG 205
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 524 IGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLA 703
+G+ G+ + R VG KA E+ F+ A EAEKMGL++ V P+E L +ET+K
Sbjct: 211 VGSFDAGYGSSIMSRLVGPKKAREMWFMTRFYTASEAEKMGLINTVVPLEDLEKETVKWC 270
Query: 704 ERI 712
I
Sbjct: 271 REI 273
>At5g43280.1 68418.m05290 enoyl-CoA hydratase/isomerase family
protein similar to Delta 3,5-delta2,4-dienoyl-CoA
isomerase, mitochondrial (ECH1) from Rattus norvegicus
[SP|Q62651], from Homo sapiens [SP|Q13011]; contains
Pfam profile PF00378 enoyl-CoA hydratase/isomerase
family protein
Length = 278
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 470 VRYHLCRRKGEIRQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGL 649
+RY C E+++ + G QRLP VG + AME+ LT F EA+ +GL
Sbjct: 138 IRY--CSEDAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSEAKDLGL 195
Query: 650 VSKVFPVEKLLEETI-KLAERIG 715
VSKVF + L+ + +AE IG
Sbjct: 196 VSKVFGSKSELDNGVTTIAEGIG 218
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Frame = +3
Query: 255 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWED-------------- 392
D + +++ II++G K F +G D+ + + + S++ R E
Sbjct: 50 DQNPDVSVIILSGAGKHFCSGIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITA 109
Query: 393 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLA 530
I C KP+IAA++G +GGG +L CDI Y E A F LA
Sbjct: 110 IEQCRKPVIAAIHGACIGGGVDLITACDIRYCSEDAFFSIKEVDLA 155
>At2g30660.1 68415.m03739 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 378
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG--FLREWEDI----SNCGKP 413
++ D ++ +I+ G +AF AG D+ + N + G F R+ + + KP
Sbjct: 44 YEEDPSVKLVILKGQGRAFCAGGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKP 103
Query: 414 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPE 542
++ +NG +G G +++ A E F P ++L P+
Sbjct: 104 QVSILNGIVMGAGAGVSIHGRFRIATENTVFAMPETSLGLFPD 146
>At5g65940.1 68418.m08301 3-hydroxyisobutyryl-coenzyme A hydrolase /
CoA-thioester hydrolase (CHY1) identical to gi:8572760;
contains Pfam profile PF00388 enoyl-CoA
hydratase/isomerase family protein
Length = 378
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG---FLREW---EDISNCGKP 413
F+ D ++ +I+ G+ +AF AG D+ + + N + G F E+ ++ K
Sbjct: 48 FEEDPSVKLVILKGHGRAFCAGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKA 107
Query: 414 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPE 542
++ +NG +GGG +++ A E F P + L P+
Sbjct: 108 QVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPD 150
>At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 422
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNT-------KQGFLREWEDISNCGK 410
++ D ++ +++ G +AF+AG DI + + K G+ + +S K
Sbjct: 88 YEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYV-LSTYRK 146
Query: 411 PIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPE 542
P ++ +NG +GGG L+ A E F P + L P+
Sbjct: 147 PQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPD 190
>At1g06550.1 68414.m00694 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 387
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNT--KQGFLREW--EDISNCGKPII 419
++ D I+I G +AF+AG D+K + S ++ + + W I K +
Sbjct: 50 WEKDDQTKLILIKGTGRAFSAGGDLKVFYHGQESKDSCLEVVYRMYWLCYHIHTYKKTQV 109
Query: 420 AAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRST 524
+ VNG ++GGG L + EK F P ++
Sbjct: 110 SLVNGISMGGGAALMVPMKFSVVTEKTVFATPEAS 144
>At3g60510.1 68416.m06768 enoyl-CoA hydratase/isomerase family
protein similar to enoyl-CoA-hydratase, Avicennia
marina, EMBL:AF190450 [GI:6014701], CoA-thioester
hydrolase CHY1 from Arabidopsis thaliana [GI:8572760];
contains Pfam profile PF00378 enoyl-CoA
hydratase/isomerase family protein
Length = 401
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Frame = +3
Query: 252 FDADSNIAAIIITGNEKAFAAGADIKEMQN-NTYSSNT--KQGFLREWEDISNCG---KP 413
++ D NI +++ G+ +AF AG DI + + T S ++ F + I G KP
Sbjct: 76 WEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKP 135
Query: 414 IIAAVNGFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPEPEA 551
+A +NG +GGG +++ A ++ F P + + P+ A
Sbjct: 136 HVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGA 181
>At1g65520.1 68414.m07434 enoyl-CoA hydratase/isomerase family
protein low similarity to enoyl-CoA hydratase
[Escherichia coli] GI:2764828, carnitine racemase
SP|P31551 [Escherichia coli]; contains Pfam profile
PF00378 enoyl-CoA hydratase/isomerase family protein
Length = 240
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 DADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREW-EDISNCGKPIIAAVN 431
D + + +I T + K F+ G D+ ++N S LR D+ + P IAAV
Sbjct: 41 DPSFSQSVLITTSDGKFFSNGYDLALAESNPSLSVVMDAKLRSLVADLISLPMPTIAAVT 100
Query: 432 GFALGGGCELAMLCDII 482
G A GC LAM D +
Sbjct: 101 GHASAAGCILAMSHDYV 117
>At4g31810.1 68417.m04521 enoyl-CoA hydratase/isomerase family
protein similar to CHY1 [gi:8572760]; contains Pfam
profile PF00388 enoyl-CoA hydratase/isomerase family
protein
Length = 409
Score = 31.1 bits (67), Expect = 0.76
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 270 IAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQG---FLREWEDISNCG---KPIIAAVN 431
I+ +++ G+ K F +GAD+ + ++ NT++ F ++ + G KP IA ++
Sbjct: 86 ISFVLMKGSGKTFCSGADVLSLYHSINEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMD 145
Query: 432 GFALGGGCELAMLCDIIYAGEKAKFGNPRSTLAPSPEPEA 551
G +G G +++ A +K +P + P+ A
Sbjct: 146 GVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFHPDAGA 185
>At5g56110.1 68418.m07000 myb family transcription factor contains
PFAM profile: Myb DNA binding domain PF00249
Length = 320
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 42 CWERMY*TSAKWYPQQAKHL*SFIAQHHTRTSRL 143
C E+ +W P++ L S+IAQH TR RL
Sbjct: 6 CCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRL 39
>At1g71740.1 68414.m08292 hypothetical protein
Length = 130
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = -1
Query: 466 IASSQPPPRAKPLTAAMMGFPQ-----LEMSSHSRRK 371
+A + PP R KPLT MG + ++SHS+RK
Sbjct: 1 MAQTVPPSRTKPLTIFKMGLASASVRLVNLASHSKRK 37
>At3g08760.1 68416.m01018 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 557
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 513 PRSTLAPSPEPEAPSVFP 566
PRS+ +PSP P PSV P
Sbjct: 496 PRSSFSPSPPPRRPSVSP 513
>At4g15820.1 68417.m02407 wound-responsive protein-related contains
weak similarity to KED [Nicotiana tabacum]
gi|8096269|dbj|BAA95789
Length = 460
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 368 LFCVAAVCIVLHLLNISTSRKSLLVTSDDDGSNVAV 261
+F VC VL L + + S K+ V+SD +G+N+ +
Sbjct: 92 IFAFQTVCAVLFLGDSTKSEKTPEVSSDSEGNNLVL 127
>At5g22440.1 68418.m02617 60S ribosomal protein L10A (RPL10aC)
Length = 217
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 548 GTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERI 712
G+ +LP +V + K M+I + G+ EAEK+GL S K L + KL +++
Sbjct: 51 GSVKLP-HVPRPK-MKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKL 103
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 341 VLHLLNISTSRKSLLVTSDDDGS 273
VL LL+ S S + LLVT+ DDG+
Sbjct: 180 VLRLLDYSRSSRHLLVTAGDDGT 202
>At4g14430.1 68417.m02226 enoyl-CoA hydratase/isomerase family
protein low siimilarity to 2-cyclohexenylcarbonyl CoA
isomerase [Streptomyces collinus] GI:8133118, enoyl-CoA
isomerase [Escherichia coli] GI:2764829; contains Pfam
profile PF00378 enoyl-CoA hydratase/isomerase family
protein
Length = 240
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 279 IIITGNEKAFAAGADIKEMQ---NNTYSSNTKQGFLREWEDIS----NCGKPIIAAVNGF 437
+I T N K F+ G D+ Q + T ++N + ++ + + P IAA+NG
Sbjct: 48 LITTANGKFFSNGFDLAWAQTAGSKTGAANRLHQMVESFKPVVAALLDLPMPTIAALNGH 107
Query: 438 ALGGGCELAMLCDIIY 485
A G LA+ D ++
Sbjct: 108 AAAAGLILALSHDYVF 123
>At3g22570.1 68416.m02852 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 116
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 359 VAAVCIVLHLLNISTSRKSLLVTSDDDGSNVAVGVKSLTAFPSSTNNGLH 210
+ V ++L + + S S+ SD+D G L FP T+N +H
Sbjct: 3 IGVVLVLLTVFVVVMSSTSVSAQSDEDECLKETGQMQLNCFPYLTDNRIH 52
>At2g27530.2 68415.m03331 60S ribosomal protein L10A (RPL10aB)
Length = 216
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 548 GTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERI 712
G+ +LP ++ + K M+I + G+ EAEKMGL + K L + KL +++
Sbjct: 50 GSVKLP-HIPRPK-MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKL 102
>At2g27530.1 68415.m03330 60S ribosomal protein L10A (RPL10aB)
Length = 216
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 548 GTQRLPRYVGKSKAMEIVLTGNFFDAHEAEKMGLVSKVFPVEKLLEETIKLAERI 712
G+ +LP ++ + K M+I + G+ EAEKMGL + K L + KL +++
Sbjct: 50 GSVKLP-HIPRPK-MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKL 102
>At2g02560.1 68415.m00195 TIP120 protein, putative similar to
TBP-interacting protein TIP120 GI:1799570 from [Rattus
norvegicus]
Length = 1219
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 362 CVAAVCIVLHLLNISTSRKSLL-VTSDDDGSNVAVGVKSLTAFPSSTNNGLHRAFSASGG 186
CVA +C+ N S++ K L+ + DD G+N A K A S G + SA G
Sbjct: 797 CVAVLCLAAGDKNCSSTVKMLMEILKDDSGTNSA---KQHLALLSLGEIGRRKDLSAHAG 853
Query: 185 L 183
+
Sbjct: 854 I 854
>At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 655
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 537 PEPEAPSVFPDTLASRKQWRSC 602
PEP A V +LA+ K WR C
Sbjct: 449 PEPPADDVKLKSLANNKMWRQC 470
>At5g14770.1 68418.m01733 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 938
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 333 MQNNTYSSNTKQGFLREWEDISNCG-KPIIAAVNGFALGGGCELAMLCDIIY 485
M N+ +G L+ W+ + +CG KP + + N +G CE + + I+
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCN-IVVGMLCENGKMEEAIH 629
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 457 SQPPPRAKPLTAAMMGFPQL 398
SQPPP P+ AMMG P +
Sbjct: 304 SQPPPGFNPMYGAMMGNPMV 323
>At1g76870.1 68414.m08945 hypothetical protein
Length = 385
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 475 ISSMPAKRRNSATRDQHWHHPRSRRHPASSQIRWQVESNGDR 600
+SSM R N+ ++Q HHP SR+ + +N DR
Sbjct: 14 VSSMRDLRPNAINQNQKQHHPNSRQDSGFNNTMDTRHNNVDR 55
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,268,760
Number of Sequences: 28952
Number of extensions: 393768
Number of successful extensions: 1263
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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