Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00728
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 118 6e-27
SB_6286| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 73 2e-13
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 8e-12
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 61 1e-09
SB_6665| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 51 8e-07
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 45 5e-05
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 42 4e-04
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 35 0.073
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 33 0.22
SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_49569| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_15777| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 30 1.6
SB_44978| Best HMM Match : REJ (HMM E-Value=3.9e-13) 29 3.6
SB_2668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 29 4.8
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94) 28 8.4
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_5346| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 118 bits (283), Expect = 6e-27
Identities = 53/64 (82%), Positives = 56/64 (87%)
Frame = +1
Query: 505 PSKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECC 684
P KIDPTVTMMQVEEKPDVTYSD+GGCKEQI+KLREVVETPLLHPE+FV LGIEPPK
Sbjct: 63 PPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVL 122
Query: 685 FSAP 696
P
Sbjct: 123 LFGP 126
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 470 VDRNKYQIHIPLPRK 514
VDRNKYQIHIPLP K
Sbjct: 51 VDRNKYQIHIPLPPK 65
>SB_6286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 105 bits (253), Expect = 3e-23
Identities = 51/57 (89%), Positives = 51/57 (89%)
Frame = +2
Query: 296 KQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRV 466
KQTL EQPLQVARCTKIINADS D KYIINVKQFAKFVVDL D VAPTDIEEGMRV
Sbjct: 45 KQTLHGEQPLQVARCTKIINADSEDAKYIINVKQFAKFVVDLGDQVAPTDIEEGMRV 101
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 505 PSKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECC 684
P ++DP V M E+ +++YSDVGG EQI +LREV+E PL +PE F ++GI PPK C
Sbjct: 114 PREVDPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCL 173
Query: 685 FSAP 696
P
Sbjct: 174 LFGP 177
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 67.7 bits (158), Expect = 8e-12
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +1
Query: 508 SKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECCF 687
+++DP V++M VE+ PD TY VGG +QI++++EV+E P+ HPE F LGI+ PK
Sbjct: 157 AEVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLL 216
Query: 688 SAP 696
P
Sbjct: 217 YGP 219
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = +1
Query: 517 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPK 675
DP VT+M++E+ P +Y+D+GG QI++++E VE PL HPE + ++GI+PPK
Sbjct: 363 DPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPK 415
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = +1
Query: 505 PSKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECC 684
P + D ++ M+ EEKP+V+Y+++GG Q +++RE VE PL H E + ++GI+PP+
Sbjct: 143 PPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVL 202
Query: 685 FSAP 696
P
Sbjct: 203 LYGP 206
>SB_6665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +2
Query: 383 INVKQFAKFVVDLQDSVAPTDIEEGMRV 466
INVKQFAKFVVDL D VAPTDIEEGMRV
Sbjct: 63 INVKQFAKFVVDLGDQVAPTDIEEGMRV 90
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +1
Query: 517 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECCFSAP 696
+P+ V E P+V++ D+GG + +L+E+V+ P+ HP+KF+K G+ P K F P
Sbjct: 293 NPSALRETVVEVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 352
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 517 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLRE 612
+P + E +V Y D+GGC++Q+ +++E
Sbjct: 141 EPVKREEEEESLNEVGYDDIGGCRKQLAQIKE 172
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +1
Query: 547 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECCFSAP 696
E P V +SDVGG + KL+E VE PL HPE F +LGI PP+ P
Sbjct: 530 EVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGP 579
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 544 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECCFSAP 696
E K V++ +GG K QI+ +RE++E PL +PE F G+ PP+ P
Sbjct: 248 EAKKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGP 298
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +1
Query: 526 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECCFSAP 696
V M V+ K V + VGG +QI+ L+E++ PL++PE F K I PP+ F P
Sbjct: 872 VDPMSVDRK--VKFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGP 926
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 496 HTAPSKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPK 675
HT PS +++++ + DVGG + + LR+ +E PLLHPE F ++G+ P+
Sbjct: 463 HTVPSTHKGMEGVVRLQP---TRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPR 519
Query: 676 ECCFSAP 696
P
Sbjct: 520 GVLLYGP 526
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 574 VGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPK 675
+ G + I+ L+E+V+ PL +PE F LGI PK
Sbjct: 213 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPK 246
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 565 YSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPKECCFSAP 696
+ DVGG + + LR+ +E PLLHPE F ++G+ P+ P
Sbjct: 12 WDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGP 55
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 553 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 648
PD+++ DVGG E++ + ++ PLLHPE F
Sbjct: 807 PDISWKDVGGLDSVKEEILDTIQLPLLHPELF 838
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 505 PSKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKL 606
P++ D V M+V+E+P YSD+GG +QI+++
Sbjct: 133 PAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQEM 166
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 574 VGGCKEQIEKLREVVETPLLHPEKFVKLGIEPPK 675
+ G + I+ L+E+V+ PL +PE F LGI PK
Sbjct: 43 LSGLDDSIKMLKELVQFPLYYPESFSHLGINGPK 76
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 34.7 bits (76), Expect = 0.073
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 559 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIEP 669
V ++D+GGC +E++ +++ + HPE F LG+ P
Sbjct: 674 VKFADIGGCSNTLEQVGKLL-VHMCHPEVFTTLGVTP 709
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 541 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 648
V EKP+V +SD+ G + E L+E V P+ P F
Sbjct: 88 VMEKPNVKWSDIAGLESAKEALKEAVILPIKFPHLF 123
>SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3824
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -1
Query: 698 GGAEKQHSFGGSIPSFTNFSGCNSGVSTTSLSFSICSL-----HPPTSLYVTSGFS 546
GG +K+ + GSIPS + SG++T + S+ SL PP++ Y + FS
Sbjct: 3315 GGDKKEVTRNGSIPSSSRLRPNLSGIATVDMLSSMSSLPRSPVSPPSTQYSSPAFS 3370
>SB_49569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = -1
Query: 686 KQHSFGGSIPSFTNFSGCNSGVSTTSLSFSICSLHPPTSLYVTSGFSSTCIMVTVGSIFE 507
K HSF + NF+G + + + + + S T+LY++S C+ VT G +
Sbjct: 80 KPHSFHACLRELKNFNGAHEAIVVITNRYPLPS--QITNLYLSSTDLDPCLYVTCGFYAQ 137
Query: 506 GAVCGSG 486
G G
Sbjct: 138 CVAFGPG 144
>SB_15777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = -1
Query: 686 KQHSFGGSIPSFTNFSGCNSGVSTTSLSFSICSLHPPTSLYVTSGFSSTCIMVTVGSIFE 507
K HSF + NF+G + + + + + S T+LY++S C+ VT G +
Sbjct: 80 KPHSFHACLRELKNFNGAHEAIVVITNRYPLPS--QITNLYLSSTDLDPCLYVTCGFYAQ 137
Query: 506 GAVCGSG 486
G G
Sbjct: 138 CVAFGPG 144
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = -3
Query: 477 RSTPTLM-PSSISVGATESCKSTTNFANCFT-LIIYFGSFESALMIFVHRATCRGC--SF 310
RSTP ++ + +T STTN FT ++ Y S L F ++TCRGC +
Sbjct: 32 RSTPQHQRTTTANFPSTNPHNSTTNPTPEFTEMVCYLCSVNFTL--FKRKSTCRGCKKTL 89
Query: 309 CSVCLS 292
CS C +
Sbjct: 90 CSNCFT 95
>SB_44978| Best HMM Match : REJ (HMM E-Value=3.9e-13)
Length = 1819
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 490 DPHTAPSKIDPTVTMMQVEEKPDVTYSDVGGC 585
D +T P +ID V+++P + +D+GGC
Sbjct: 1122 DNYTFPERIDTGNLSAPVQDRPGLNKTDLGGC 1153
>SB_2668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 496 HTAPSKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 639
H P +D ++ + ++ P VT+ D+ G + ++E+V P+L P
Sbjct: 36 HLEPRMVDLIMSEI-MDHGPPVTWDDIAGLEFAKNVIKEIVVWPMLRP 82
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 665 SIPSFTNFSGCNSGVSTTSLSFSICSLHPPTSLYVTSGFSSTCIMVTVGSI 513
+IPS + S S +STTS SL PT + GFS+ + + S+
Sbjct: 794 AIPSLMS-STLTSSISTTSTGMPPASLSTPTPFFTHPGFSTKPVTTSPTSL 843
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 356 ADSNDPKYIINVKQFAKFVVDLQD 427
ADS+DP Y V+ FAK +VD D
Sbjct: 2311 ADSSDPTYWPRVQSFAKNIVDYFD 2334
>SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94)
Length = 1047
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -1
Query: 614 TSLSFSICSLHPPTSLYVTSGFSSTCIMVTVGSIFEGAVCGSGIYYDP 471
+S+ FS+ SLH PT + T +VT + + + G+ + +DP
Sbjct: 257 SSVFFSVGSLHAPTYCTAVAPTGRTLCLVTRIMVVQLRIDGAKLIFDP 304
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 541 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 648
+++ P+V ++D+ E + L E V PLL P+ F
Sbjct: 241 LQKNPNVHWADIADLHEAKKLLEEAVVLPLLMPDYF 276
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 375 FGSFESALMIFVHRATCRGCSFCSVCLSAARSHKAGGANP 256
+ SFES+ ++ +TC S C S R+ K G NP
Sbjct: 555 YKSFESSALVPSRPSTCGLDSPCQTDTSICRNGKCSGGNP 594
>SB_5346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 665 SIPSFTNFSGCNSGVSTTSLSFSICSLHPPTSLYVTSGFSSTCIMVTVGSIFEGAVCGS- 489
S+ +FS C + FS C + S+Y FS TC M++V + CG
Sbjct: 30 SVYGNAHFSTCGMMSVYGNAHFSTCGM---MSVYGNPHFS-TCGMMSVYGDVHFSTCGMM 85
Query: 488 GIYYDPHQPSC 456
+Y +PH +C
Sbjct: 86 SVYGNPHFSTC 96
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 665 SIPSFTNFSGCNSGVSTTSLSFSICSLHPPTSLYVTSGFSSTCIMVTVGSIFEGAVCGS- 489
S+ +FS C + FS C + S+Y FS TC M++V + CG
Sbjct: 296 SVYGNAHFSTCGMMSVYGNAHFSTCGM---MSVYGNPHFS-TCGMMSVYGDVHFSTCGMM 351
Query: 488 GIYYDPHQPSC 456
+Y +PH +C
Sbjct: 352 SVYGNPHFSTC 362
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,188,446
Number of Sequences: 59808
Number of extensions: 411855
Number of successful extensions: 1072
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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