Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00727
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical pr... 142 1e-34
Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical pr... 142 1e-34
Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 30 1.4
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 30 1.4
U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein. 29 2.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 3.3
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 3.3
Z82060-10|CAN86903.1| 138|Caenorhabditis elegans Hypothetical p... 28 4.4
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 28 4.4
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 28 4.4
U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z82060-7|CAB04884.1| 454|Caenorhabditis elegans Hypothetical pr... 27 7.7
AC017117-12|AAF16614.2| 98|Caenorhabditis elegans Hypothetical... 27 7.7
>Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical
protein C47D12.6b protein.
Length = 684
Score = 142 bits (345), Expect = 1e-34
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +2
Query: 254 YNTLVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENMFSFDVEKETFALKPMN 433
YN LV+FI++QYR RGF EV+TPNMYN KLW+TSGHW HY+E+MF +VEKE F LKPMN
Sbjct: 311 YNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYSEDMFKIEVEKEEFGLKPMN 370
Query: 434 CPGHCLMFDNRTRSWRELPLRLADF 508
CPGHCLMF + ++ ELP R ADF
Sbjct: 371 CPGHCLMFGHMPHTYNELPFRFADF 395
Score = 113 bits (272), Expect = 9e-26
Identities = 47/66 (71%), Positives = 60/66 (90%)
Frame = +3
Query: 57 GQSGSESLQRVYGISFPEPKQLKEWEVIQEEAAKRDHRKIGREQELFFFHELSPGSCFFQ 236
G++ +ESLQR+YGISFP+ KQLKEW+ +QEEAAKRDHRK+G+E +LFFFH+LSPGS F+
Sbjct: 245 GKADAESLQRLYGISFPDSKQLKEWQKLQEEAAKRDHRKLGKEHDLFFFHQLSPGSAFWY 304
Query: 237 PRGAHI 254
P+GAHI
Sbjct: 305 PKGAHI 310
Score = 64.5 bits (150), Expect = 5e-11
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 511 VLHRNELSGALTGLTRVRRFQQDDAHIFC 597
VLHRNE+SGALTGLTRVRRFQQDDAHIFC
Sbjct: 397 VLHRNEMSGALTGLTRVRRFQQDDAHIFC 425
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +1
Query: 1 HTGKVKALKVTKNSATYWEGKAEARA 78
HTGKVKA+ +TKNS++YWEGKA+A +
Sbjct: 226 HTGKVKAMAITKNSSSYWEGKADAES 251
>Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical
protein C47D12.6a protein.
Length = 725
Score = 142 bits (345), Expect = 1e-34
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +2
Query: 254 YNTLVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENMFSFDVEKETFALKPMN 433
YN LV+FI++QYR RGF EV+TPNMYN KLW+TSGHW HY+E+MF +VEKE F LKPMN
Sbjct: 352 YNKLVDFIRKQYRRRGFTEVITPNMYNKKLWETSGHWQHYSEDMFKIEVEKEEFGLKPMN 411
Query: 434 CPGHCLMFDNRTRSWRELPLRLADF 508
CPGHCLMF + ++ ELP R ADF
Sbjct: 412 CPGHCLMFGHMPHTYNELPFRFADF 436
Score = 113 bits (272), Expect = 9e-26
Identities = 47/66 (71%), Positives = 60/66 (90%)
Frame = +3
Query: 57 GQSGSESLQRVYGISFPEPKQLKEWEVIQEEAAKRDHRKIGREQELFFFHELSPGSCFFQ 236
G++ +ESLQR+YGISFP+ KQLKEW+ +QEEAAKRDHRK+G+E +LFFFH+LSPGS F+
Sbjct: 286 GKADAESLQRLYGISFPDSKQLKEWQKLQEEAAKRDHRKLGKEHDLFFFHQLSPGSAFWY 345
Query: 237 PRGAHI 254
P+GAHI
Sbjct: 346 PKGAHI 351
Score = 64.5 bits (150), Expect = 5e-11
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 511 VLHRNELSGALTGLTRVRRFQQDDAHIFC 597
VLHRNE+SGALTGLTRVRRFQQDDAHIFC
Sbjct: 438 VLHRNEMSGALTGLTRVRRFQQDDAHIFC 466
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = +1
Query: 1 HTGKVKALKVTKNSATYWEGKAEARA 78
HTGKVKA+ +TKNS++YWEGKA+A +
Sbjct: 267 HTGKVKAMAITKNSSSYWEGKADAES 292
>Z82270-3|CAB63205.1| 667|Caenorhabditis elegans Hypothetical
protein F53H2.3 protein.
Length = 667
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Frame = -2
Query: 593 KMCASSCWKRRTRVRPVSAPLS-------SLRCSTRSRPTEAATRATTSCGCRTSGNVRD 435
+M + WKRR +PVSA + S R + + P E A S TSG
Sbjct: 398 EMASVDGWKRRQPNKPVSASVPAGITRPYSQRPAAQQIPQEVAAPYHPSTAAPTSGASSY 457
Query: 434 SSSVSKRTFPFQ--RRMRTCFQHSEPSDPRSATAWRCTC 324
+++++ FP + C Q+++ PR + C
Sbjct: 458 GAALARGQFPRNTVKHDEKCAQNAQQQQPRGDSTSSSQC 496
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical protein
C47A10.1 protein.
Length = 1294
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 349 LPQLGVVHVRGHHFMESSRPVLFFNEIHECVVM*APRGWKKHEPGDSSWKKNN 191
L Q+ H+R H + S P+LF I E +V G HE +++ K N
Sbjct: 1096 LRQMNPKHLRKHIALVSQEPILFDTSIRENIVYGLQPGEYTHEQIETACSKAN 1148
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -3
Query: 349 LPQLGVVHVRGHHFMESSRPVLFFNEIHECVVM*APRGWKKHEPGDSSWKKNN 191
L Q+ H+R H + S P+LF I E +V G HE +++ K N
Sbjct: 1096 LRQMNPKHLRKHIALVSQEPILFDTSIRENIVYGLQPGEYTHEQIETACSKAN 1148
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 34 KNSATYW-EGKAEARAYSACTVYHFQ-NRNS*KNGRSFKRRPPSVTTERLEGNKSYSSST 207
KN +T E + EA + C + H N +S +FK ++ TE + + S SSST
Sbjct: 654 KNGSTMRKESREEATQTADCGLPHISSNDDSDSRFPAFKSSSVAMLTEPYKSSSSSSSST 713
Query: 208 NCLPARVSSSHVELTLQHTREFH*RTIQV 294
+ +P+ + L ++T + T+QV
Sbjct: 714 SSIPSDPAPRPYFLKEEYTSLANKPTVQV 742
>U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein.
Length = 846
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 596 QKMCASSCWKRRTRVRPVSAPLSSLRCSTRSRPTEA 489
+K CA+ W++ R RP + + RC +RS P+EA
Sbjct: 752 RKFCAAK-WRKNVR-RPRKSTSCNWRCRSRSSPSEA 785
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 3.3
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = -2
Query: 578 SCWKRRTRVRPVSAPLSSLRCSTRSRPTEAATRATTSCGCRTSGNVRDSSSVSKRTFPFQ 399
+C V P ++SL C T + T AAT TT T+ + +S S T+
Sbjct: 2762 TCNSNSQWVTPDGTVITSLSCGTVAPATTAAT-TTTLAPAATTTSTAAASDCSTSTWNAW 2820
Query: 398 RRMRTCFQ--HSEPSDPRSATAWR----CTCSGS 315
+ TC + S + R + + CTCSGS
Sbjct: 2821 QEWSTCTETCGSCGTQQRFRSCNKPVDTCTCSGS 2854
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 3.3
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = -2
Query: 578 SCWKRRTRVRPVSAPLSSLRCSTRSRPTEAATRATTSCGCRTSGNVRDSSSVSKRTFPFQ 399
+C V P ++SL C T + T AAT TT T+ + +S S T+
Sbjct: 2762 TCNSNSQWVTPDGTVITSLSCGTVAPATTAAT-TTTLAPAATTTSTAAASDCSTSTWNAW 2820
Query: 398 RRMRTCFQ--HSEPSDPRSATAWR----CTCSGS 315
+ TC + S + R + + CTCSGS
Sbjct: 2821 QEWSTCTETCGSCGTQQRFRSCNKPVDTCTCSGS 2854
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.7 bits (61), Expect = 3.3
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = -2
Query: 578 SCWKRRTRVRPVSAPLSSLRCSTRSRPTEAATRATTSCGCRTSGNVRDSSSVSKRTFPFQ 399
+C V P ++SL C T + T AAT TT T+ + +S S T+
Sbjct: 2762 TCNSNSQWVTPDGTVITSLSCGTVAPATTAAT-TTTLAPAATTTSTAAASDCSTSTWNAW 2820
Query: 398 RRMRTCFQ--HSEPSDPRSATAWR----CTCSGS 315
+ TC + S + R + + CTCSGS
Sbjct: 2821 QEWSTCTETCGSCGTQQRFRSCNKPVDTCTCSGS 2854
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.7 bits (61), Expect = 3.3
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = -2
Query: 578 SCWKRRTRVRPVSAPLSSLRCSTRSRPTEAATRATTSCGCRTSGNVRDSSSVSKRTFPFQ 399
+C V P ++SL C T + T AAT TT T+ + +S S T+
Sbjct: 2762 TCNSNSQWVTPDGTVITSLSCGTVAPATTAAT-TTTLAPAATTTSTAAASDCSTSTWNAW 2820
Query: 398 RRMRTCFQ--HSEPSDPRSATAWR----CTCSGS 315
+ TC + S + R + + CTCSGS
Sbjct: 2821 QEWSTCTETCGSCGTQQRFRSCNKPVDTCTCSGS 2854
>Z82060-10|CAN86903.1| 138|Caenorhabditis elegans Hypothetical
protein T27F6.5d protein.
Length = 138
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 263 LVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENMFSF-DVEKETFALKPMNCP 439
L + ++++ G ++ P + +LW+ +G W M F D ++ L+ N
Sbjct: 53 LCRILDVEFQNSGALKIAMPIVGTQQLWEKTGRWEAMGPEMIRFHDRQQNHMCLQVANRR 112
Query: 440 GHCLMFDNRT 469
G+ D T
Sbjct: 113 GNVHRTDRNT 122
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -2
Query: 566 RRTRVRPVSAPLSSLRCSTRSRPTEAATRATTS-CGCRTSGNVRDSSSVSKRTFPFQ 399
R TRV +AP+ S ST + + T ++S +T+ ++ SSS +K T P Q
Sbjct: 499 RATRVSSSTAPVVSTVTSTITSQSIVTTNKSSSPITSKTTTSINVSSSTTKSTRPMQ 555
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 151 PPSVTTERLEGNKSYSSSTNCLPARVSSS 237
PPSVT ++ N S+ +STN L V +S
Sbjct: 293 PPSVTISPIQDNPSFCNSTNLLAPGVVTS 321
>U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical
protein C33G8.10 protein.
Length = 347
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 30 YEELGNVLGGQSGSESLQRVYGISFPEPKQLKEWEVIQ 143
YEE + + ++ L YG S P+ K+LK+ E+++
Sbjct: 190 YEESKAYIKSKDYTDMLLHFYGSSMPKEKRLKDHEILK 227
>Z82060-7|CAB04884.1| 454|Caenorhabditis elegans Hypothetical
protein T27F6.5a protein.
Length = 454
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 263 LVNFIKEQYRSRGFHEVVTPNMYNAKLWQTSGHWAHYAENMFSF-DVEKETFALKP 427
L + ++++ G ++ P + +LW+ +G W M F D ++ L+P
Sbjct: 53 LCRILDVEFQNSGALKIAMPIVGTQQLWEKTGRWEAMGPEMIRFHDRQQNHMCLQP 108
>AC017117-12|AAF16614.2| 98|Caenorhabditis elegans Hypothetical
protein F43C11.12 protein.
Length = 98
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 127 NGRSFKRRPPSVTTERLEGNKSYSSSTNC 213
NG +F + PPS T L G K+ + NC
Sbjct: 69 NGITFNKDPPSYTNGSLNGYKTEIFTMNC 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,835,938
Number of Sequences: 27780
Number of extensions: 310442
Number of successful extensions: 983
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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