Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00726
(747 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 268 3e-72
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 268 3e-72
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 268 3e-72
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 268 3e-72
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 158 3e-39
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 154 5e-38
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 83 2e-16
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 75 5e-14
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 48 9e-06
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 43 2e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 43 2e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 42 3e-04
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 42 6e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 40 0.001
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 40 0.001
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 40 0.002
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 40 0.002
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 39 0.004
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.005
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 33 0.15
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 33 0.15
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.27
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 31 1.1
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 31 1.1
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.9
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.3
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.7
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.7
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 5.7
At2g02410.1 68415.m00181 expressed protein 28 5.7
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 5.7
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.6
At3g49440.1 68416.m05404 F-box family protein-related contains w... 28 7.6
At3g08870.1 68416.m01031 lectin protein kinase, putative similar... 28 7.6
At5g46380.1 68418.m05708 hypothetical protein 27 10.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 268 bits (657), Expect = 3e-72
Identities = 130/157 (82%), Positives = 139/157 (88%), Gaps = 1/157 (0%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 220 DKLKAERD-WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 396
DKLKAER+ DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 397 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 507
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = +3
Query: 513 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 674
P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 160 PKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 268 bits (657), Expect = 3e-72
Identities = 130/157 (82%), Positives = 139/157 (88%), Gaps = 1/157 (0%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 220 DKLKAERD-WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 396
DKLKAER+ DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 397 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 507
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = +3
Query: 513 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 674
P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 160 PKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 268 bits (657), Expect = 3e-72
Identities = 130/157 (82%), Positives = 139/157 (88%), Gaps = 1/157 (0%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 220 DKLKAERD-WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 396
DKLKAER+ DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 397 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 507
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = +3
Query: 513 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 674
P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 160 PKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 268 bits (657), Expect = 3e-72
Identities = 130/157 (82%), Positives = 139/157 (88%), Gaps = 1/157 (0%)
Frame = +1
Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 220 DKLKAERD-WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 396
DKLKAER+ DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 397 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 507
G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Score = 83.4 bits (197), Expect = 1e-16
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = +3
Query: 513 PPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 674
P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 160 PKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 158 bits (384), Expect = 3e-39
Identities = 74/165 (44%), Positives = 110/165 (66%), Gaps = 2/165 (1%)
Frame = +1
Query: 55 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 234
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 235 ERD-WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 411
ER+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 412 GISK-NGQTREHALLAFTLGVKQLIVGVNKMDSMNHHTVSPDLRK 543
G GQTREHA + GV+Q+IV +NKMD + + DL K
Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIK 402
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 519 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTKMPWFKGWQVERKE 695
YS+ RF+ IK+ V S+++ + +++ ++P+S N++ PS W
Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY----- 445
Query: 696 GKADGKCLIEALDAI 740
G CL++A+D++
Sbjct: 446 ---QGPCLLDAVDSV 457
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 154 bits (374), Expect = 5e-38
Identities = 74/153 (48%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Frame = +1
Query: 49 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 228
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 229 KAER-DWYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 405
+ ER ++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEF
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217
Query: 406 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 504
E G + GQTREH LA TLGV +LIV VNKMD
Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKMD 250
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 519 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKG 674
+S+ R++EI++++ ++K GYN V F+PISG G NM + + PW+ G
Sbjct: 256 WSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 83.0 bits (196), Expect = 2e-16
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Frame = +1
Query: 37 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 216
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116
Query: 217 LDKLKAERD-WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 393
+D ER + A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 394 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSMN 513
G QT+EH LLA +GV ++V +NK D ++
Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVD 209
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 74.9 bits (176), Expect = 5e-14
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = +1
Query: 46 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 225
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107
Query: 226 LKAERD-WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 402
E+ A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167
Query: 403 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 504
QT+EH LLA +GV L+ +NK+D
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVD 194
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 47.6 bits (108), Expect = 9e-06
Identities = 50/176 (28%), Positives = 75/176 (42%)
Frame = +1
Query: 28 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 207
D K EK N +I H+D GKST L+ G TI+K + Q + K +
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTG-----TIKKGHGQPQYLDKLQ-RE 109
Query: 208 AWVLDKLKAERDWYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 387
+ K + +Y N + E S Y + +ID PGH DF + S A+L+V
Sbjct: 110 RGITVKAQTATMFYENKVE--DQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVD 167
Query: 388 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSMNHHTVSPDLRKSRRK 555
A G QT + LAF + ++ +NK+D T P+ K++ K
Sbjct: 168 AAQG-------VQAQTVANFYLAFEANL-TIVPVINKID---QPTADPERVKAQLK 212
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/127 (28%), Positives = 56/127 (44%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERD 243
NI + H+DSGK+T T +++ G I E E ++ G G+ + L++ K
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGAKMDSMDLEREKGITI 121
Query: 244 WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 423
WK Y V IID PGH DF + D A+L++ + G I+
Sbjct: 122 QSAATYCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 424 NGQTREH 444
+ Q R +
Sbjct: 178 DRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/127 (28%), Positives = 56/127 (44%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERD 243
NI + H+DSGK+T T +++ G I E E ++ G G+ + L++ K
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGAKMDSMDLEREKGITI 121
Query: 244 WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 423
WK Y V IID PGH DF + D A+L++ + G I+
Sbjct: 122 QSAATYCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 424 NGQTREH 444
+ Q R +
Sbjct: 178 DRQMRRY 184
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/112 (27%), Positives = 49/112 (43%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERD 243
NI ++ HVD GK+T HLI GG G ++ LD+ +
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG----------GVLHPRLAGKLRFMDYLDEEQRRAI 60
Query: 244 WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 399
+ K++ Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 61 TMKSSSISLKYK--DYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 41.5 bits (93), Expect = 6e-04
Identities = 29/112 (25%), Positives = 52/112 (46%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERD 243
N +I H+D GKST L+ G + R +++ + ++ + + KL+A R
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQFLDNMDLERER----GITIKLQAARM 143
Query: 244 WYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 399
Y +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 144 RY-------VYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +1
Query: 280 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 459
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 460 TLGVKQLIVGVNKMDSMN 513
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +1
Query: 280 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 459
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 460 TLGVKQLIVGVNKMDSMN 513
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 39.9 bits (89), Expect = 0.002
Identities = 42/153 (27%), Positives = 67/153 (43%)
Frame = +1
Query: 52 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 231
K + NI ++ H+D+GK+TTT ++Y G + E+ +G+ W+ + +
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDWM--EQE 142
Query: 232 AERDWYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 411
ER A F K+ + IID PGH DF + D A+ + + A
Sbjct: 143 QERGITITSAATTTF-WDKHRINIIDTPGHVDFTLEVERALRVLDGAICLF-----DSVA 196
Query: 412 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSM 510
G+ +T A GV + I VNKMD +
Sbjct: 197 GVEPQSETVWRQ--ADKYGVPR-ICFVNKMDRL 226
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Frame = +1
Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKGSFKYAWVLDKLKA 234
N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERG------ITIKSTG 74
Query: 235 ERDWYH-NDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 384
+Y D +L F + ++Y + +ID+PGH DF + D A+++V
Sbjct: 75 ISLYYEMTDESLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 38.7 bits (86), Expect = 0.004
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Frame = +1
Query: 34 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFKY 207
P++ + INI IGHV GKST ++ G+ R + E+ ++G + K
Sbjct: 25 PEVISRQATINIGTIGHVAHGKST----VVKAISGVQTVRFKNELERNITIKLGYANAKI 80
Query: 208 AWVLDKLKAERDWYHNDIALWK----------FETSKY----YVTIIDAPGHRDFIKNMI 345
D+ K R + K FE SK +V+ +D PGH + M+
Sbjct: 81 YKCEDE-KCPRPMCYKAYGSGKEDTPNCDVPGFENSKMKLLRHVSFVDCPGHDILMATML 139
Query: 346 TGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 504
G + D A+L++AA QT EH + +K +I+ NK+D
Sbjct: 140 NGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLKHIIILQNKID 186
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 38.3 bits (85), Expect = 0.005
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 15/172 (8%)
Frame = +1
Query: 34 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIE-KFEKEAQEMGKGSFKYA 210
P++ + INI IGHV GKST ++ G+ T++ K E E K + A
Sbjct: 25 PEVISRQATINIGTIGHVAHGKST----IVKAVSGV--HTVKFKSELERNITIKLGYANA 78
Query: 211 WVLDKLKAERDWYHNDIALWKFET--------SKY------YVTIIDAPGHRDFIKNMIT 348
+ K R + K + KY +V+ +D PGH + M+
Sbjct: 79 KIYKCEKCPRPVAYKSFGSGKEDNPSCDVSGHEKYKMKLLRHVSFVDCPGHDILMATMLN 138
Query: 349 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 504
G + D A+LI+AA QT EH + +K +I+ NK+D
Sbjct: 139 GAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHLKDIIIIQNKID 184
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 280 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 399
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 280 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 399
+ Y I+D PGH +F M AD AVLIV A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 295 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 399
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +1
Query: 301 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 480
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 481 IVGVNKMDSM 510
I+ +NK+D +
Sbjct: 757 IIALNKVDRL 766
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 295 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 474
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 475 QLIVGVNKMDSM 510
I+ +NK+D +
Sbjct: 611 -FIIALNKVDRL 621
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 301 IIDAPGHRDFIKNMITGTSQADCAVLIV 384
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 301 IIDAPGHRDFIKNMITGTSQADCAVLIV 384
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 639 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 737
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 575 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 676
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 522 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 611
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +1
Query: 547 RRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVKKAKLTEN 714
+R SR + QLL S CP L G TCWS + R D W +
Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186
Query: 715 ASLKLSMP 738
A KLSMP
Sbjct: 187 A--KLSMP 192
>At2g02410.1 68415.m00181 expressed protein
Length = 308
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 160 KFEKEAQEMGKGSFKYAWVLDKLKAERDWYHNDIALWKFETSKYYVT 300
K KE Q G G K A K K E+D +D L++ T+ Y T
Sbjct: 75 KLWKEFQSRGSGMAKPATSYRKKKVEKDELPDDSELYRDPTNTLYYT 121
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 304 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 483
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 484 VGVNKMD 504
+ +NK+D
Sbjct: 609 IAINKID 615
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 528 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 638
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At3g49440.1 68416.m05404 F-box family protein-related contains weak
hit to TIGRFAM TIGR01640 : F-box protein interaction
domain
Length = 200
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 211 WVLDKLKAERDWYHNDIALWKFETSKYYVTII 306
WVLD ++ + W H LW+ Y++ I+
Sbjct: 100 WVLDDVEEHKWWRHYIPPLWESLVENYWLVIV 131
>At3g08870.1 68416.m01031 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 693
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/60 (21%), Positives = 29/60 (48%)
Frame = -1
Query: 423 LRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIVVIP 244
+R+ E G + ++L+G C H + + + I +G++ ++ P N +V+P
Sbjct: 406 VREFMAEIESLGRLGHKNLVNLQGWCKHKNELLLIYDYIPNGSLDSLLYQTPRRNGIVLP 465
>At5g46380.1 68418.m05708 hypothetical protein
Length = 607
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = -3
Query: 250 DTSHAQPLVCPIPKHI*RILYPFP-----GPPSRTSRW 152
D H +PLV P+P H R YP P GP +R+S +
Sbjct: 483 DAYHLRPLVAPLPLH--RDSYPCPPTLAAGPYTRSSAY 518
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,112,134
Number of Sequences: 28952
Number of extensions: 372696
Number of successful extensions: 1212
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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