Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00725
(703 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 49 5e-06
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 43 5e-04
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 42 8e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 42 0.001
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 39 0.006
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 35 0.093
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 35 0.093
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 34 0.21
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 32 0.87
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 32 0.87
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 32 0.87
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 31 1.1
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 31 1.1
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 31 1.1
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 31 1.1
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 31 2.0
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 30 2.6
AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p pro... 29 6.1
AY058634-1|AAL13863.1| 382|Drosophila melanogaster LD33276p pro... 29 6.1
AL109630-8|CAB51688.1| 382|Drosophila melanogaster EG:BACR7A4.1... 29 6.1
AE014298-131|AAF45570.1| 382|Drosophila melanogaster CG3704-PA ... 29 6.1
AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA... 29 6.1
BT015989-1|AAV36874.1| 1033|Drosophila melanogaster RE54250p pro... 29 8.1
BT009956-1|AAQ22425.1| 1035|Drosophila melanogaster RH39293p pro... 29 8.1
AF233269-1|AAF34810.1| 2121|Drosophila melanogaster myosin VIIB ... 29 8.1
AE014134-1309|AAN10638.1| 998|Drosophila melanogaster CG6976-PD... 29 8.1
AE014134-1308|AAF52536.2| 2121|Drosophila melanogaster CG6976-PA... 29 8.1
AE014134-1307|AAN10637.1| 999|Drosophila melanogaster CG6976-PC... 29 8.1
AE014134-1306|AAN10636.1| 2122|Drosophila melanogaster CG6976-PB... 29 8.1
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 49.2 bits (112), Expect = 5e-06
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 PTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSV-PVTR 174
PT++P ++ PD++D A+ KN++ L E + +L SDH PV++ L R ++V P TR
Sbjct: 176 PTYWPSDLNKLPDLIDFAVTKNISRSLVKAECLPDLSSDHSPVLIHLRRYAENVKPPTR 234
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 42.7 bits (96), Expect = 5e-04
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +1
Query: 1 PTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTV 180
PT++P + PD++D A+ K+V + + E +++L SDH PV + + P V +
Sbjct: 175 PTYWPADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNMLTRPHIVDPPYRL 234
Query: 181 VDWHT 195
++ T
Sbjct: 235 TNFRT 239
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 41.9 bits (94), Expect = 8e-04
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 PTHYPLNIAHRPDILDIALLKNVTLRLHS-IEVVSELDSDHRPVVMKLGRAPDSVPVTRT 177
PT YP P +D AL K V L +H+ I V EL SDH P+V+ L S P
Sbjct: 174 PTRYPYGCRGSPGYIDFALTKGV-LGIHANISAVVELSSDHLPLVITLDAGAISYPKMER 232
Query: 178 VVDWHTLGISLAESDPPS-LPFN 243
++ T + + +S S LP N
Sbjct: 233 LITRRT-NLEVFQSQLESTLPLN 254
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 1 PTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
PT++P + PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 175 PTYWPADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 39.1 bits (87), Expect = 0.006
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 1 PTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTV 180
PT YP +H P +D A+ + L +I +LDSDH P+++ + V + +
Sbjct: 175 PTRYPYVPSHTPSCIDFAVYHGIPDHLATITQSWDLDSDHLPLIISIETDSTHVNPSPRL 234
Query: 181 VDWHT 195
V HT
Sbjct: 235 VTKHT 239
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 35.1 bits (77), Expect = 0.093
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 1 PTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMK 138
PT+ P N + LD+ L N+ +L + V+ EL SDH PVV+K
Sbjct: 198 PTYIPHNHKAKASTLDLCLT-NIPNQLANPAVMQELSSDHLPVVIK 242
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 35.1 bits (77), Expect = 0.093
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 1 PTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMK 138
PT+ P N + LD+ L N+ +L + V+ EL SDH PVV+K
Sbjct: 146 PTYIPHNHKAKASTLDLCLT-NIPNQLANPAVMQELSSDHLPVVIK 190
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 33.9 bits (74), Expect = 0.21
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + P +D ++ K + I V++L SDH P+++++
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSSDHLPILLEI 237
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 0.87
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + +P LD A+ K + EL SDH P+ + L
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 0.87
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + +P LD A+ K + EL SDH P+ + L
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 31.9 bits (69), Expect = 0.87
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + +P LD A+ K + EL SDH P+ + L
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYSTDELSSDHLPIQIVL 241
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + P +D ++ K + I ++L SDH P+++++
Sbjct: 76 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 121
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + P +D ++ K + I ++L SDH P+++++
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 237
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + P +D ++ K + I ++L SDH P+++++
Sbjct: 154 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 199
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + P +D ++ K + I ++L SDH P+++++
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 237
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + P +D ++ K + I ++L SDH P+++++
Sbjct: 192 THFPHDTRKNPSAIDFSICKGLGRFEKRISSGADLSSDHLPILLEI 237
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 4 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 141
TH+P + P +D ++ K + I + L SDH P+++++
Sbjct: 204 THFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLPILLEI 249
>AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p
protein.
Length = 844
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 55 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 204
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
>AY058634-1|AAL13863.1| 382|Drosophila melanogaster LD33276p
protein.
Length = 382
Score = 29.1 bits (62), Expect = 6.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +1
Query: 88 IEVVSELDSDHRPVVMKLGR------APDSVPVTRTVVDWHTLGISLAESDPPSLPFNPD 249
+E V E ++D++PV K + A PV D H + + L+ DPP P +
Sbjct: 263 LESVDEYETDYKPVYEKKRQERLAESATGPKPVDHVEEDGHAVPLGLSLQDPP--PHTGN 320
Query: 250 SIRLLRIPLKP 282
SI L+ L P
Sbjct: 321 SIFLMAPSLVP 331
>AL109630-8|CAB51688.1| 382|Drosophila melanogaster EG:BACR7A4.17
protein.
Length = 382
Score = 29.1 bits (62), Expect = 6.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +1
Query: 88 IEVVSELDSDHRPVVMKLGR------APDSVPVTRTVVDWHTLGISLAESDPPSLPFNPD 249
+E V E ++D++PV K + A PV D H + + L+ DPP P +
Sbjct: 263 LESVDEYETDYKPVYEKKRQERLAESATGPKPVDHVEEDGHAVPLGLSLQDPP--PHTGN 320
Query: 250 SIRLLRIPLKP 282
SI L+ L P
Sbjct: 321 SIFLMAPSLVP 331
>AE014298-131|AAF45570.1| 382|Drosophila melanogaster CG3704-PA
protein.
Length = 382
Score = 29.1 bits (62), Expect = 6.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Frame = +1
Query: 88 IEVVSELDSDHRPVVMKLGR------APDSVPVTRTVVDWHTLGISLAESDPPSLPFNPD 249
+E V E ++D++PV K + A PV D H + + L+ DPP P +
Sbjct: 263 LESVDEYETDYKPVYEKKRQERLAESATGPKPVDHVEEDGHAVPLGLSLQDPP--PHTGN 320
Query: 250 SIRLLRIPLKP 282
SI L+ L P
Sbjct: 321 SIFLMAPSLVP 331
>AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA
protein.
Length = 844
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 55 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 204
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
>BT015989-1|AAV36874.1| 1033|Drosophila melanogaster RE54250p
protein.
Length = 1033
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 511 GSRTSVMRDFTSRCRARIRIRFSAVGYLS*ARIEAFLALRSSLI 380
G+ +V D +SR I IRF+ G + ARI+ +L +S ++
Sbjct: 201 GNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIV 244
>BT009956-1|AAQ22425.1| 1035|Drosophila melanogaster RH39293p
protein.
Length = 1035
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 511 GSRTSVMRDFTSRCRARIRIRFSAVGYLS*ARIEAFLALRSSLI 380
G+ +V D +SR I IRF+ G + ARI+ +L +S ++
Sbjct: 202 GNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIV 245
>AF233269-1|AAF34810.1| 2121|Drosophila melanogaster myosin VIIB
protein.
Length = 2121
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 511 GSRTSVMRDFTSRCRARIRIRFSAVGYLS*ARIEAFLALRSSLI 380
G+ +V D +SR I IRF+ G + ARI+ +L +S ++
Sbjct: 201 GNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIV 244
>AE014134-1309|AAN10638.1| 998|Drosophila melanogaster CG6976-PD,
isoform D protein.
Length = 998
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 511 GSRTSVMRDFTSRCRARIRIRFSAVGYLS*ARIEAFLALRSSLI 380
G+ +V D +SR I IRF+ G + ARI+ +L +S ++
Sbjct: 201 GNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIV 244
>AE014134-1308|AAF52536.2| 2121|Drosophila melanogaster CG6976-PA,
isoform A protein.
Length = 2121
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 511 GSRTSVMRDFTSRCRARIRIRFSAVGYLS*ARIEAFLALRSSLI 380
G+ +V D +SR I IRF+ G + ARI+ +L +S ++
Sbjct: 201 GNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIV 244
>AE014134-1307|AAN10637.1| 999|Drosophila melanogaster CG6976-PC,
isoform C protein.
Length = 999
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 511 GSRTSVMRDFTSRCRARIRIRFSAVGYLS*ARIEAFLALRSSLI 380
G+ +V D +SR I IRF+ G + ARI+ +L +S ++
Sbjct: 202 GNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIV 245
>AE014134-1306|AAN10636.1| 2122|Drosophila melanogaster CG6976-PB,
isoform B protein.
Length = 2122
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 511 GSRTSVMRDFTSRCRARIRIRFSAVGYLS*ARIEAFLALRSSLI 380
G+ +V D +SR I IRF+ G + ARI+ +L +S ++
Sbjct: 202 GNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIV 245
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,783,898
Number of Sequences: 53049
Number of extensions: 627565
Number of successful extensions: 1819
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1819
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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