Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00724
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1890|AAF50107.1|  143|Drosophila melanogaster CG6302-PA...    99   3e-21
AY118830-1|AAM50690.1|  125|Drosophila melanogaster GH28557p pro...    38   0.015
AE014296-3248|AAF49093.1|  125|Drosophila melanogaster CG7770-PA...    38   0.015
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h...    30   3.1  
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d...    30   3.1  
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d...    30   3.1  
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA...    30   3.1  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   4.0  

>AE014296-1890|AAF50107.1|  143|Drosophila melanogaster CG6302-PA
           protein.
          Length = 143

 Score =   99 bits (238), Expect = 3e-21
 Identities = 46/88 (52%), Positives = 61/88 (69%)
 Frame = +2

Query: 245 FPNFRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVERTVAEVLPE 424
           F   RNEQR L + ++ L+M+L EHK VIETL   +  RKCFR  GGVL ERTV EVLP+
Sbjct: 19  FQQLRNEQRNLVNSLNTLEMDLREHKTVIETLEAADPERKCFRQIGGVLCERTVKEVLPQ 78

Query: 425 LISNYEQLPKAIQSLEDQLTQKGEEINK 508
           L+ N + + K IQ + + L++KG E+NK
Sbjct: 79  LVENKDFIAKTIQMVTNDLSKKGSELNK 106


>AY118830-1|AAM50690.1|  125|Drosophila melanogaster GH28557p
           protein.
          Length = 125

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 21/88 (23%), Positives = 46/88 (52%)
 Frame = +2

Query: 245 FPNFRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVERTVAEVLPE 424
           + N +    ++  + + L+ +LNE+K V++ L  +    K +++FG VLV++ + E    
Sbjct: 19  YQNLQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKVYKLFGPVLVKQELEESRQN 78

Query: 425 LISNYEQLPKAIQSLEDQLTQKGEEINK 508
           +    E + K ++S  D L    +++ K
Sbjct: 79  VGKRIEYISKELKSSTDALENMEKDMLK 106


>AE014296-3248|AAF49093.1|  125|Drosophila melanogaster CG7770-PA
           protein.
          Length = 125

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 21/88 (23%), Positives = 46/88 (52%)
 Frame = +2

Query: 245 FPNFRNEQRQLGSKISELQMELNEHKIVIETLRGVELTRKCFRMFGGVLVERTVAEVLPE 424
           + N +    ++  + + L+ +LNE+K V++ L  +    K +++FG VLV++ + E    
Sbjct: 19  YQNLQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKVYKLFGPVLVKQELEESRQN 78

Query: 425 LISNYEQLPKAIQSLEDQLTQKGEEINK 508
           +    E + K ++S  D L    +++ K
Sbjct: 79  VGKRIEYISKELKSSTDALENMEKDMLK 106


>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
            homolog protein.
          Length = 3584

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 473  DQLTQKGEEINKTLRNMIFASNVADRTMPEPPPEQSTSTKSNV 601
            +++  K E I  + R  +   +V   +MP  PP+++ ST+S V
Sbjct: 952  EEMLSKSEIIESSYRPTVAVEDVPPLSMPPRPPKRTKSTRSRV 994


>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
            disease protein homolog protein.
          Length = 3583

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 473  DQLTQKGEEINKTLRNMIFASNVADRTMPEPPPEQSTSTKSNV 601
            +++  K E I  + R  +   +V   +MP  PP+++ ST+S V
Sbjct: 952  EEMLSKSEIIESSYRPTVAVEDVPPLSMPPRPPKRTKSTRSRV 994


>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
            disease protein homolog protein.
          Length = 3583

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 473  DQLTQKGEEINKTLRNMIFASNVADRTMPEPPPEQSTSTKSNV 601
            +++  K E I  + R  +   +V   +MP  PP+++ ST+S V
Sbjct: 952  EEMLSKSEIIESSYRPTVAVEDVPPLSMPPRPPKRTKSTRSRV 994


>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
            protein.
          Length = 3583

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 473  DQLTQKGEEINKTLRNMIFASNVADRTMPEPPPEQSTSTKSNV 601
            +++  K E I  + R  +   +V   +MP  PP+++ ST+S V
Sbjct: 952  EEMLSKSEIIESSYRPTVAVEDVPPLSMPPRPPKRTKSTRSRV 994


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +2

Query: 392  VERTVAEVLPELISNYEQLPKAIQSLEDQLTQKGEEINKTLR--NMIFASNVADRTMPEP 565
            +E TV  V  E  +N   +      L +Q T    E+  T+R       S   DRT P  
Sbjct: 7821 LETTVPSVTSETTTNVP-IGSTGGQLTEQSTSSPSEVRTTIRVEESTLPSRSTDRTFPSE 7879

Query: 566  PPEQSTSTKSN 598
             PE+ T+  S+
Sbjct: 7880 SPEKPTTLPSD 7890


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,519,902
Number of Sequences: 53049
Number of extensions: 673223
Number of successful extensions: 1790
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)