Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00722
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z70268-2|CAA94218.1|   98|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AL023856-4|CAC15863.1|  331|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z73972-4|CAA98260.1|  666|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z81035-2|CAB02736.1|  379|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z46267-2|CAC42301.1|  600|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>AF016657-1|AAB93653.1|  361|Caenorhabditis elegans Hypothetical
           protein C16C4.7 protein.
          Length = 361

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -1

Query: 759 LFLF--PLNVVQ*KLTLPFAISFLYYVHFFQTALF-VKVSLFLNNNKVLFYFIICF 601
           LFLF  P+ +   K    + IS LY   F +  LF VK+SL  + + VLF   +CF
Sbjct: 235 LFLFRNPVTIPLKKFP-KYPISRLYPQFFIKNCLFSVKISLCRSQHLVLFVLFLCF 289


>Z70268-2|CAA94218.1|   98|Caenorhabditis elegans Hypothetical
           protein T21E8.5 protein.
          Length = 98

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 163 IISPSSTHVFKYHFVAVKAKSAMC 92
           +I+  S HVFK HF A++ K A C
Sbjct: 42  MITEFSLHVFKEHFEAIRRKGAYC 65


>AL023856-4|CAC15863.1|  331|Caenorhabditis elegans Hypothetical
           protein Y94A7B.7 protein.
          Length = 331

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 750 FPLNVVQ*KLTLPFAISFLYYVHFFQTALFVKVSLFLNNNKVLF 619
           FPL +VQ +  +P  I  +Y +  F+      +S+F N   VLF
Sbjct: 79  FPLGIVQWEKRIPTDILVIYVLAIFKIVPMTIISMFENRYFVLF 122


>Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical
           protein Y6G8.1 protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -1

Query: 765 SVLFLFPLNVVQ*KLTLPFAISFLYYVHFFQTALFVKVSLFLNNNKVLFYF 613
           ++L  FP  V+Q  ++L   + FL+YV +     F  +  FL+  +   YF
Sbjct: 83  TLLMKFPQAVIQFDVSLQILMLFLFYVLYICMQAFHLLLFFLSIGRFTLYF 133


>Z73972-4|CAA98260.1|  666|Caenorhabditis elegans Hypothetical
           protein F15H10.7 protein.
          Length = 666

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 145 THVFKYHFVAVKAKSAMCKNSICNQRVKTF 56
           + +FKYH+  +  KS+  KN +  Q    F
Sbjct: 165 SEIFKYHYTQIVPKSSNIKNKVIEQSTSDF 194


>Z81035-2|CAB02736.1|  379|Caenorhabditis elegans Hypothetical
           protein C15H11.2 protein.
          Length = 379

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +1

Query: 184 KRAKKTRVTCTLSSYITPSSHAIFKNSL*TFRVLRSNMVYKHITPSYNVKSQTILKMVLN 363
           +RAK   +  TL   +T +   +  N L  + VL  +   +++  +Y + S  +L  V+N
Sbjct: 286 RRAKVRSLRITLLLILTYAVTWLPYNLLSWWMVLHWDSYRENLDSNYILNSLVVLNSVIN 345

Query: 364 PFIH 375
           PFI+
Sbjct: 346 PFIY 349


>Z46267-2|CAC42301.1|  600|Caenorhabditis elegans Hypothetical
           protein F49E2.1b protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +1

Query: 244 HAIFKNSL*TFRVLRSNMVYKHITPSYNVKSQTILKMVLNPFIHSCLHLSSCNIIK*IR- 420
           HA+F+N         SN  Y+ +TP  +  S  ++ +  +   HS LH S    I  IR 
Sbjct: 370 HAVFRNGRSEEPAKSSNDSYRGLTPVTSA-SSILVHLPSSSLYHSHLHSSRHFFISQIRC 428

Query: 421 FSIRYLLS 444
           FS  Y +S
Sbjct: 429 FSTTYSVS 436


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,092,612
Number of Sequences: 27780
Number of extensions: 290553
Number of successful extensions: 605
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)