Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00721
         (726 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RF80 Cluster: Predicted protein; n=1; Nematostella ve...    36   1.3  
UniRef50_Q12XY8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_A0CCG5 Cluster: Chromosome undetermined scaffold_167, w...    33   9.5  

>UniRef50_A7RF80 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1477

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 302 PVVDSANTALASANVSNAARLEPRELTYTIRLCWHSLCHQLR*GKKVTVIEPAI 463
           P  DS +  L   N  N ARL  +  +Y  R CWH +  +   GK VT I+  I
Sbjct: 290 PSSDSPSVRLPRVNTMNEARLLSKRTSYECRKCWHLMEEK---GKMVTSIKATI 340


>UniRef50_Q12XY8 Cluster: Putative uncharacterized protein; n=1;
           Methanococcoides burtonii DSM 6242|Rep: Putative
           uncharacterized protein - Methanococcoides burtonii
           (strain DSM 6242)
          Length = 517

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -3

Query: 187 SCSNIIAAKLLIVYLNTVQQLLYSPAILSIYFIIVASI*CLAGHIANDLS 38
           S + II   LLI++L T+  L Y P  L ++ + +ASI    G+I N L+
Sbjct: 287 SFNEIIFLSLLILFLPTIYSLTYGPYFLVLFIVFLASI--SFGNILNSLA 334


>UniRef50_A0CCG5 Cluster: Chromosome undetermined scaffold_167, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_167, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2472

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 80   CNYNEIY*QYRRAIQQLLHCVEIYNQQ 160
            C Y+E++ Q ++ I  L  C E+YNQQ
Sbjct: 1626 CQYDELFNQCKKIIDTLTDCSELYNQQ 1652


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,185,496
Number of Sequences: 1657284
Number of extensions: 11271188
Number of successful extensions: 21166
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21159
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)