Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00721
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.83 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.83 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   4.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 199 FLTTSC--SNIIAAKLLIVYLNTVQQLLYSPAILSIYFIIVA 80
           F+T +C  SN  ++KLLI+Y   +Q L  S     +Y ++ A
Sbjct: 26  FVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSYWLYLVLEA 67


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 199 FLTTSC--SNIIAAKLLIVYLNTVQQLLYSPAILSIYFIIVA 80
           F+T +C  SN  ++KLLI+Y   +Q L  S     +Y ++ A
Sbjct: 44  FVTFTCTRSNFRSSKLLILYNIILQVLFVSFVSYWLYLVLEA 85


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 176 YYSRQVADCISQHSATIAV*PGDIVNIFHYSCKYLMSSRPHCK 48
           YY + +   IS+  + +A+  G IVN F  SC Y + +   CK
Sbjct: 49  YYRQPIYAKISETKSIVAMVMGTIVNAF--SC-YTVLAPVLCK 88


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 709 IIFKLRLAITYT*PEHDPIYLMF*YL-FXIYDYMLTYIESTYAR 581
           +++KL   I +    H      F  L F  Y + L+YI +TY+R
Sbjct: 57  LLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSR 100


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 709 IIFKLRLAITYT*PEHDPIYLMF*YL-FXIYDYMLTYIESTYAR 581
           +++KL   I +    H      F  L F  Y + L+YI +TY+R
Sbjct: 13  LLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSR 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,557
Number of Sequences: 336
Number of extensions: 3190
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)