Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00720
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46117| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_21596| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_54484| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_47613| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_22783| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_30350| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_50595| Best HMM Match : Herpes_US9 (HMM E-Value=2.5) 44 1e-04
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_56296| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_45982| Best HMM Match : TIL (HMM E-Value=2.5) 41 0.001
SB_16598| Best HMM Match : TIL (HMM E-Value=2.5) 41 0.001
SB_12257| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_45011| Best HMM Match : FYVE (HMM E-Value=9.8) 40 0.001
SB_55150| Best HMM Match : TIL (HMM E-Value=2.5) 40 0.002
SB_49087| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_23403| Best HMM Match : FYVE (HMM E-Value=9.8) 40 0.002
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_56250| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_49567| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_9699| Best HMM Match : FYVE (HMM E-Value=9.8) 39 0.004
SB_34797| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_27909| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_4723| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_57065| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_23080| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_19009| Best HMM Match : Sperm_Ag_HE2 (HMM E-Value=2.3) 38 0.010
SB_48355| Best HMM Match : Herpes_US9 (HMM E-Value=4.7) 37 0.013
SB_17609| Best HMM Match : Herpes_US9 (HMM E-Value=4.7) 37 0.013
SB_11205| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_29700| Best HMM Match : DUF551 (HMM E-Value=8.8) 36 0.040
SB_28753| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_45893| Best HMM Match : Arc (HMM E-Value=3.3) 35 0.069
SB_51709| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_1551| Best HMM Match : WD40 (HMM E-Value=0.0019) 35 0.069
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_26770| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_35044| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_25769| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_19267| Best HMM Match : TIL (HMM E-Value=2.5) 33 0.21
SB_42300| Best HMM Match : Filament_head (HMM E-Value=4.9) 31 1.1
SB_41723| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 30 2.0
SB_30664| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_42677| Best HMM Match : TUDOR (HMM E-Value=0) 29 3.4
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 28 7.9
>SB_46117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +2
Query: 518 MPLDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
MPLDVL RTRATL S P P G GN +K RAGD LQL +NEEFLVSA
Sbjct: 1 MPLDVLDRTRATLTVSRVFPSPEGVGNLVKHRRAGDRSLQLLILNEEFLVSA 52
>SB_21596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 58.4 bits (135), Expect = 5e-09
Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 MPLDVLGRTRATLKESACSPWPR-GPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
MPLDVLGRTRATL S + R G GN +K RAGD LQL +NEEFLVSA
Sbjct: 1 MPLDVLGRTRATLTVSTSLSFARKGVGNLVKHRRAGDRSLQLLILNEEFLVSA 53
>SB_54484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = +2
Query: 518 MPLDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
MPLDVLGRTRATL S + G GN +K RAGD +L NEEFLVSA
Sbjct: 1 MPLDVLGRTRATLTVSTSLSFAGGVGNLVKHRRAGDRSCKLLIFNEEFLVSA 52
>SB_47613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/53 (60%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 MPLDVLGRTRATLKESACSPWPR-GPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
MPLDVLGR R TL S + R G GN +K RAGD LQL +NEEFLVSA
Sbjct: 1 MPLDVLGRPRVTLTVSTSLSFRRKGVGNLVKHRRAGDRSLQLLILNEEFLVSA 53
>SB_22783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/53 (60%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 MPLDVLGRTRA-TLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
MPLDVLGRTR T + P P G GN +K RAGD LQL NEEFLVSA
Sbjct: 1 MPLDVLGRTRRYTDGVNESFPRPEGVGNLVKHRRAGDRSLQLLIFNEEFLVSA 53
>SB_30350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/46 (56%), Positives = 28/46 (60%)
Frame = +2
Query: 536 GRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
GRTRATL P P G GN +K RAGD +L NEEFLVSA
Sbjct: 4 GRTRATLTGQRVFPSPEGGGNLVKHRRAGDRSCKLLIFNEEFLVSA 49
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 2 KGVFINQERKLEVRRRLDTALVLTVN 79
K VFINQERKLE RRR DT LVLT+N
Sbjct: 18 KNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 2 KGVFINQERKLEVRRRLDTALVLTVN 79
K VFINQERKLE RRR DT LVLT+N
Sbjct: 18 KNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 2 KGVFINQERKLEVRRRLDTALVLTVN 79
K VFINQERKLE RRR DT LVLT+N
Sbjct: 18 KNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 2 KGVFINQERKLEVRRRLDTALVLTVN 79
K VFINQERKLE RRR DT LVLT+N
Sbjct: 18 KNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 2 KGVFINQERKLEVRRRLDTALVLTVN 79
K VFINQERKLE RRR DT LVLT+N
Sbjct: 37 KNVFINQERKLEDRRRSDTVLVLTIN 62
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 2 KGVFINQERKLEVRRRLDTALVLTVN 79
K VFINQERKLE RRR DT LVLT+N
Sbjct: 18 KNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +2
Query: 2 KGVFINQERKLEVRRRLDTALVLTVN 79
K VFINQERKLE RRR DT LVLT+N
Sbjct: 20 KNVFINQERKLEDRRRSDTVLVLTIN 45
>SB_50595| Best HMM Match : Herpes_US9 (HMM E-Value=2.5)
Length = 101
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/53 (54%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 MPLDVLGR-TRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
MPLDVLGR R T + +G GN +K RAGD LQL NEEFLVSA
Sbjct: 1 MPLDVLGRHARYTDGVNESFLRRKGVGNLVKHRRAGDRSLQLLIFNEEFLVSA 53
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +2
Query: 8 VFINQERKLEVRRRLDTALVLTVN 79
VFINQERKLE RRR DT LVLT+N
Sbjct: 20 VFINQERKLEDRRRSDTVLVLTIN 43
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 11 FINQERKLEVRRRLDTALVLTVN 79
FINQERKLE RRR DT LVLT+N
Sbjct: 21 FINQERKLEDRRRSDTVLVLTIN 43
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 11 FINQERKLEVRRRLDTALVLTVN 79
FINQERKLE RRR DT LVLT+N
Sbjct: 21 FINQERKLEDRRRSDTVLVLTIN 43
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 11 FINQERKLEVRRRLDTALVLTVN 79
FINQERKLE RRR DT LVLT+N
Sbjct: 21 FINQERKLEDRRRSDTVLVLTIN 43
>SB_56296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/69 (40%), Positives = 37/69 (53%)
Frame = +2
Query: 467 RGTGVFEPHEIEQ*RSVMPLDVLGRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSP 646
RGTG++E + + L + +LK S +G GN +K RAGD LQL
Sbjct: 29 RGTGIWEQVVSGRAQRCSNLTCISLALLSLKWMRSSQ-VKGVGNLVKYRRAGDRSLQLLI 87
Query: 647 INEEFLVSA 673
+NEEFLVSA
Sbjct: 88 LNEEFLVSA 96
>SB_45982| Best HMM Match : TIL (HMM E-Value=2.5)
Length = 211
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R ++++ C+ G GN +K RAGD LQL +NEEFLVSA
Sbjct: 121 RKVIRKATCARCFAGVGNLVKHRRAGDRSLQLLILNEEFLVSA 163
>SB_16598| Best HMM Match : TIL (HMM E-Value=2.5)
Length = 216
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R ++++ C+ G GN +K RAGD LQL +NEEFLVSA
Sbjct: 126 RKVIRKATCARCFAGVGNLVKHRRAGDRSLQLLILNEEFLVSA 168
>SB_12257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R +++ C+ G GN +K RAGD LQL +NEEFLVSA
Sbjct: 165 RKVTRKATCARCFAGVGNLVKYRRAGDRSLQLLILNEEFLVSA 207
>SB_45011| Best HMM Match : FYVE (HMM E-Value=9.8)
Length = 163
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R +++ C+ G GN +K RAGD LQL +NEEFLVSA
Sbjct: 73 RKVTRKATCARCFAGVGNLVKYRRAGDRSLQLLILNEEFLVSA 115
>SB_55150| Best HMM Match : TIL (HMM E-Value=2.5)
Length = 211
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R ++++ C+ G GN +K RAGD LQL NEEFLVSA
Sbjct: 121 RKVIRKATCARCFAGVGNLVKHRRAGDRSLQLLIFNEEFLVSA 163
>SB_49087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R +++ C+ G GN +K RAGD LQL +NEEFLVSA
Sbjct: 73 RKVTRKATCARCFAGVGNLVKHRRAGDRSLQLLILNEEFLVSA 115
>SB_23403| Best HMM Match : FYVE (HMM E-Value=9.8)
Length = 137
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R +++ C+ G GN +K RAGD LQL +NEEFLVSA
Sbjct: 47 RKVTRKATCARCFAGVGNLVKHRRAGDRSLQLLILNEEFLVSA 89
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +2
Query: 581 PRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
P+G GN +K RAGD LQL +NEEFLVSA
Sbjct: 42 PQGVGNLVKHRRAGDRSLQLLILNEEFLVSA 72
>SB_56250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R +++ C+ G GN +K RAGD LQL NEEFLVSA
Sbjct: 126 RKVTRKATCARCFAGVGNLVKHRRAGDRSLQLLIFNEEFLVSA 168
>SB_49567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R +++ C+ G GN +K RAGD LQL NEEFLVSA
Sbjct: 73 RKVTRKATCARCFAGVGNLVKHRRAGDRSLQLLIFNEEFLVSA 115
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2
Query: 581 PRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
P+G GN +K RAGD LQL NEEFLVSA
Sbjct: 102 PQGVGNLVKHRRAGDRSLQLLIFNEEFLVSA 132
>SB_9699| Best HMM Match : FYVE (HMM E-Value=9.8)
Length = 163
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R +++ C+ G GN +K RAGD LQL NEEFLVSA
Sbjct: 73 RKVTRKATCARCFAGVGNLVKHRRAGDRSLQLLIFNEEFLVSA 115
>SB_34797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 564 DSFSVARVRPRTSKGITDL 508
D+ SVARVRPRTSKGITDL
Sbjct: 34 DTVSVARVRPRTSKGITDL 52
>SB_27909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 564 DSFSVARVRPRTSKGITDL 508
D+ SVARVRPRTSKGITDL
Sbjct: 132 DTVSVARVRPRTSKGITDL 150
>SB_4723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 564 DSFSVARVRPRTSKGITDL 508
D+ SVARVRPRTSKGITDL
Sbjct: 64 DTVSVARVRPRTSKGITDL 82
>SB_57065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 564 DSFSVARVRPRTSKGITDL 508
D+ SVARVRPRTSKGITDL
Sbjct: 64 DTVSVARVRPRTSKGITDL 82
>SB_23080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 564 DSFSVARVRPRTSKGITDL 508
D+ SVARVRPRTSKGITDL
Sbjct: 64 DTVSVARVRPRTSKGITDL 82
>SB_19009| Best HMM Match : Sperm_Ag_HE2 (HMM E-Value=2.3)
Length = 157
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = -1
Query: 674 SRLLGIPRLWGIIANPNPQHEGVSAGCPGL*ARENML 564
SRLLGIPR IIA PQH+ VS P L A+E ++
Sbjct: 88 SRLLGIPRSRSIIAMIYPQHDDVSQDYPRLPAKERLV 124
>SB_48355| Best HMM Match : Herpes_US9 (HMM E-Value=4.7)
Length = 98
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 584 RGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
+G GN +K RAGD LQL +NEEFLVSA
Sbjct: 21 KGVGNLVKHRRAGDRSLQLLILNEEFLVSA 50
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 529 CPGPHARYTEGIS 567
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_17609| Best HMM Match : Herpes_US9 (HMM E-Value=4.7)
Length = 98
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2
Query: 584 RGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
+G GN +K RAGD LQL +NEEFLVSA
Sbjct: 21 KGVGNLVKHRRAGDRSLQLLILNEEFLVSA 50
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 529 CPGPHARYTEGIS 567
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_11205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 36.3 bits (80), Expect = 0.023
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
R +++ C+ G GN +K RA D LQL +NEEFLVSA
Sbjct: 73 RKVTRKATCARCFAGVGNLVKHRRARDRSLQLLILNEEFLVSA 115
>SB_29700| Best HMM Match : DUF551 (HMM E-Value=8.8)
Length = 86
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 564 DSFSVARVRPRTSKGITDL 508
D+ SVA VRPRTSKGITDL
Sbjct: 64 DTVSVAHVRPRTSKGITDL 82
>SB_28753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = +2
Query: 587 GPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
G GN +K RAGD LQL NEEFLVSA
Sbjct: 22 GVGNLVKHRRAGDRSLQLLIFNEEFLVSA 50
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1
Query: 529 CPGPHARYTEGIS 567
C GPHARYT+G++
Sbjct: 2 CSGPHARYTDGVN 14
>SB_45893| Best HMM Match : Arc (HMM E-Value=3.3)
Length = 186
Score = 34.7 bits (76), Expect = 0.069
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 593 GNPLKLLRAGDWGLQLSPINEEFLVSA 673
GN +K RAGD LQL +NEEFLVSA
Sbjct: 3 GNLVKHRRAGDRSLQLLILNEEFLVSA 29
>SB_51709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 34.7 bits (76), Expect = 0.069
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 593 GNPLKLLRAGDWGLQLSPINEEFLVSA 673
GN +K RAGD LQL +NEEFLVSA
Sbjct: 3 GNLVKHRRAGDRSLQLLILNEEFLVSA 29
>SB_1551| Best HMM Match : WD40 (HMM E-Value=0.0019)
Length = 101
Score = 34.7 bits (76), Expect = 0.069
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 593 GNPLKLLRAGDWGLQLSPINEEFLVSA 673
GN +K RAGD LQL +NEEFLVSA
Sbjct: 3 GNLVKHRRAGDRSLQLLILNEEFLVSA 29
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 2 KGVFINQERKLEVRRRLDT 58
K VFINQERKLE RRR DT
Sbjct: 10 KNVFINQERKLEDRRRSDT 28
>SB_26770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 593 GNPLKLLRAGDWGLQLSPINEEFLVSA 673
GN +K RAGD LQL NEEFLVSA
Sbjct: 3 GNLVKHRRAGDRSLQLLIFNEEFLVSA 29
>SB_35044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 593 GNPLKLLRAGDWGLQLSPINEEFLVSA 673
GN +K RAGD LQL NEEFLVSA
Sbjct: 3 GNLVKHRRAGDRSLQLLIFNEEFLVSA 29
>SB_25769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3
Query: 564 DSFSVARVRPRTSKGITDL 508
D+ SVARVR +TSKGITDL
Sbjct: 64 DTVSVARVRAKTSKGITDL 82
>SB_19267| Best HMM Match : TIL (HMM E-Value=2.5)
Length = 214
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2
Query: 587 GPGNPLKLLRAGDWGLQLSPINEEFLVSA 673
G GN +K RA D LQL +NEEFLVSA
Sbjct: 138 GVGNLVKHRRARDRSLQLLILNEEFLVSA 166
>SB_42300| Best HMM Match : Filament_head (HMM E-Value=4.9)
Length = 152
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2
Query: 614 RAGDWGLQLSPINEEFLVSA 673
RAGD LQL +NEEFLVSA
Sbjct: 85 RAGDRSLQLLILNEEFLVSA 104
>SB_41723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 518 MPLDVLGRTRATLKES 565
MPLDVLGRTRATL S
Sbjct: 1 MPLDVLGRTRATLTVS 16
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3
Query: 630 PQSPARRSFSGLPGPLGQGEHADSFSVARVRPRTSKG-ITDLYCSISCGSKTPVPLRR 460
P + SF GL P G+ H + ++P S G +T+L + +++P+ ++R
Sbjct: 30 PSTTTLYSFKGLANPTGKDMHPTKVLASTLKPNNSTGSLTNLKSNKERKAESPLSIKR 87
>SB_30664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 518 MPLDVLGRTRATL 556
MPLDVLGRTRATL
Sbjct: 1 MPLDVLGRTRATL 13
>SB_42677| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 1150
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +2
Query: 545 RATLKESACSPWPRGPGNPLKLLRA---GDWGLQLSPINEEF 661
+AT+++ P+P G LK++ W L L PIN EF
Sbjct: 325 KATVQKVYLKPYPLADGTSLKVIVTEVISPWELWLQPINTEF 366
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 174 CNHTPPGVQNLWFPGSCPPSHCSNVGGSLDD 82
C+ PG + PGSC P +C N+ GSL D
Sbjct: 854 CDRCMPG--SYGGPGSCKPCNC-NMAGSLSD 881
>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1696
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 141 WFPGSCPPSHCSNVGGSLDDIFTVRTRAVS 52
W+PG CPP C+ +L + TV + +S
Sbjct: 80 WYPGYCPPHKCAG-RNTLQECCTVYSPEIS 108
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -3
Query: 165 TPPGV-QNLWFPGSCPPSHCSNVGG 94
+P GV +N W PGS S+C++ GG
Sbjct: 174 SPYGVDENSWSPGSSQSSNCTSPGG 198
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,825,925
Number of Sequences: 59808
Number of extensions: 522399
Number of successful extensions: 1412
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -