Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00720
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           25   2.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.2  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    23   8.8  

>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 618 ARRSFSGLPGPLGQGEHADSFSVARV 541
           A RS S L  PLG   HA   +V RV
Sbjct: 91  AGRSTSSLTVPLGTSRHASGGTVVRV 116


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 645 GDNCKPQSPARRSFSGLPGPLG 580
           G  C P+  A +   GLPGP+G
Sbjct: 91  GGCCLPKCFAEKGNRGLPGPMG 112


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 349 ICLVNSGNERDSSLLNRRRYLG 414
           ICL+ + +  D+S LN++ + G
Sbjct: 44  ICLIQNESRYDTSALNKKNWNG 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,451
Number of Sequences: 2352
Number of extensions: 16971
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)