Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00716
(618 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 170 2e-41
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 157 2e-37
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 112 7e-24
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 107 2e-22
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 104 2e-21
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 4e-17
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 90 4e-17
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 76 6e-13
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 62 1e-08
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 58 2e-07
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 57 3e-07
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 55 1e-06
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 55 2e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 50 3e-05
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 48 2e-04
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 47 3e-04
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 47 3e-04
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 47 3e-04
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 46 5e-04
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 46 7e-04
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 46 7e-04
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 46 0.001
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 45 0.001
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.001
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 45 0.002
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 45 0.002
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 44 0.002
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 44 0.002
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 43 0.007
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 42 0.009
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 41 0.027
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 39 0.11
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 38 0.14
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 38 0.14
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 38 0.25
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 38 0.25
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 36 0.58
UniRef50_A4LVV0 Cluster: Tetratricopeptide TPR_2 repeat protein ... 36 1.0
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 35 1.8
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 33 5.5
UniRef50_Q2J4L0 Cluster: Serine/threonine protein kinase; n=3; F... 32 9.5
UniRef50_A2ECQ2 Cluster: Serine/threonine protein phosphatase; n... 32 9.5
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 170 bits (414), Expect = 2e-41
Identities = 85/111 (76%), Positives = 89/111 (80%)
Frame = +2
Query: 176 GYEMEG*PFRWCISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLN 355
G ++ PF KG + KQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN
Sbjct: 33 GTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLN 92
Query: 356 HIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 508
IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERPRS
Sbjct: 93 FIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
Score = 85.8 bits (203), Expect = 7e-16
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +3
Query: 123 NHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVELSSP 266
+HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVE P
Sbjct: 15 SHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQP 62
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 157 bits (381), Expect = 2e-37
Identities = 77/104 (74%), Positives = 85/104 (81%)
Frame = +2
Query: 197 PFRWCISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 376
PF KG + +KQPNSAIRKCVRVQLIKNGKKVTAFVP DGCLN ++ENDE
Sbjct: 42 PFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE 101
Query: 377 VLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 508
VL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 102 VLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
Score = 72.5 bits (170), Expect = 7e-12
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 PRNTNGA*HVN-HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVELSSP 266
PR N A + HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E P
Sbjct: 6 PRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQP 64
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 112 bits (269), Expect = 7e-24
Identities = 51/83 (61%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGV 433
++PN+A+RKCVRVQL+KNGK VTAFVP DG LN+I E+DEV++ G +G ++GDIPGV
Sbjct: 63 RKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGV 122
Query: 434 RFKVVKVANVSLLALYKEKKERP 502
RFKV+KV VSL A+++ KK++P
Sbjct: 123 RFKVIKVNGVSLWAIWRGKKQKP 145
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +3
Query: 129 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVELSSPTLPSANASVYSSLR 308
R++ RW D +K+ +G K +P GA A+GIVLEKVGVE P NA+V +R
Sbjct: 20 RQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKP-----NAAVRKCVR 74
Query: 309 TE 314
+
Sbjct: 75 VQ 76
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 107 bits (257), Expect = 2e-22
Identities = 49/83 (59%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGV 433
KQPNSAIRKC+R+QLIKNG+++TAF P DG +N I+E+DEV + G GR G + GDIPGV
Sbjct: 58 KQPNSAIRKCIRIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGV 117
Query: 434 RFKVVKVANVSLLALYKEKKERP 502
RF+V KV +VSL + K+++P
Sbjct: 118 RFRVFKVNDVSLEEMVAGKRDKP 140
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 120 VNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVELSSP 266
V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVE P
Sbjct: 12 VHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQP 60
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 104 bits (249), Expect = 2e-21
Identities = 51/84 (60%), Positives = 59/84 (70%)
Frame = -1
Query: 507 DLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTN 328
DLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F+QPS GT
Sbjct: 6 DLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSFGTK 65
Query: 327 AVTFFPFLMSCTRTHLRMAELGCL 256
AVTF PFL++ T TH +AE GCL
Sbjct: 66 AVTFLPFLINWTSTHFSIAEFGCL 89
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 4e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +2
Query: 371 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 508
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 89.8 bits (213), Expect = 4e-17
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +2
Query: 284 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 460
CVRVQL KNGK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 461 VSLLALYKEKKERP 502
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +3
Query: 129 RREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVELSSP 266
R++ RW+D ++KK +G K +P GA A+GIVLEKVGVE P
Sbjct: 20 RQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKP 65
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 76.2 bits (179), Expect = 6e-13
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3
Query: 126 HRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVELSSP 266
HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+E P
Sbjct: 87 HRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/61 (57%), Positives = 39/61 (63%)
Frame = +2
Query: 197 PFRWCISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 376
PF KG + KQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN
Sbjct: 110 PFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGP 169
Query: 377 V 379
V
Sbjct: 170 V 170
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/107 (32%), Positives = 54/107 (50%)
Frame = -3
Query: 481 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLN 302
++S++R++GYF HLK +S ++T +TF+T+S + + A + G E L VLN
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLN 67
Query: 301 ELYTDAFADGRVGLLSSTPTFSRTMPFA*DAPPKGLAFHFVPMWAFL 161
EL+ DA DGR+ L P F + PK + FL
Sbjct: 68 ELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFL 114
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C +K + + ++PNSA+RK RV+L NG+ TA++P +G ++++E+ VLV
Sbjct: 78 CFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLVR 134
Query: 389 GFGRKGHAVGDIPGVRFKVVK 451
G G K D+PGVR+K+V+
Sbjct: 135 GGGAK-----DLPGVRYKIVR 150
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C ++G R K+PNSA+RK RV+L NG +VTA++P +G ++++E+ VLV
Sbjct: 27 CPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNLQEHSIVLVR 83
Query: 389 GFGRKGHAVGDIPGVRFKVVKVA 457
G GR V D+PGVR+K+++ A
Sbjct: 84 G-GR----VKDLPGVRYKIIRGA 101
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 55.2 bits (127), Expect = 1e-06
Identities = 31/69 (44%), Positives = 49/69 (71%)
Frame = +2
Query: 251 RTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 430
+ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ VLV G GR V D+PG
Sbjct: 100 KPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR----VQDVPG 151
Query: 431 VRFKVVKVA 457
V++ +V+ A
Sbjct: 152 VKYHLVRGA 160
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +2
Query: 251 RTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 430
+ K+PNSA RKC RV+L NGK+V F+P +G ++++E++ VLV G GR D+PG
Sbjct: 80 KPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNIVLVEG-GR----TQDLPG 131
Query: 431 VRFKVVK 451
V+ K+V+
Sbjct: 132 VKLKIVR 138
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 371 DEVLVAGFGRKGHAVGDIPGVRFKVVK 451
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 50.4 bits (115), Expect = 3e-05
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C R+G R K+PNSA+RK RV+L G +VTA++P G ++++E+ VLV
Sbjct: 27 CPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNLQEHAVVLVR 83
Query: 389 GFGRKGHAVGDIPGVRFKVVK 451
G GR V D+PGVR+ +V+
Sbjct: 84 G-GR----VKDLPGVRYHIVR 99
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/65 (36%), Positives = 48/65 (73%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 436
K+PNSA+RK +++L KN K++ A++P +G + +++++ VL+ +KG V D+PG++
Sbjct: 41 KKPNSALRKIAKIKL-KNKKEILAYIPGEG--HALQDHNFVLI----KKGR-VQDLPGIK 92
Query: 437 FKVVK 451
+KV++
Sbjct: 93 YKVIR 97
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 47.2 bits (107), Expect = 3e-04
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +2
Query: 251 RTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 430
+ K+PNSA RKCV V+L NGK++TA++P G ++++E++ VL R G D+PG
Sbjct: 102 KPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNLQEHNIVLC----RVGRC-RDVPG 153
Query: 431 VRFKVVK 451
V+ K V+
Sbjct: 154 VKIKCVR 160
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 47.2 bits (107), Expect = 3e-04
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +2
Query: 185 MEG*PFRWCISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIE 364
+EG PFR +G R + K+PNSA+RK RV+L G+ VTA++P G ++ +
Sbjct: 45 LEGSPFR-----RGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQ 96
Query: 365 ENDEVLVAGFGRKGHAVGDIPGVRFKVVK 451
E+ VL+ G GR D PGV++ VV+
Sbjct: 97 EHAVVLLRG-GR----AQDCPGVQYHVVR 120
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 47.2 bits (107), Expect = 3e-04
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C RKG R + K+PNSA RK RV+L NG V+A++P +G + +E+ V V
Sbjct: 55 CPQRKGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVR 111
Query: 389 GFGRKGHAVGDIPGVRFKVVKVA 457
G GR D+PGV++ V++ A
Sbjct: 112 G-GR----CQDLPGVKYHVIRGA 129
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 46.4 bits (105), Expect = 5e-04
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +2
Query: 251 RTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 430
+ K+PNSA RKCV V+L NGK++ A++P G ++++E++ VLV GR + D PG
Sbjct: 40 KPKKPNSANRKCVLVRL-SNGKEMVAYIP--GIGHNLQEHNVVLVR-VGR----LKDCPG 91
Query: 431 VRFKVVK 451
V+ K V+
Sbjct: 92 VKLKCVR 98
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 436
K+PNSA+RK ++ L N K V A+VP + + I +N VL+ KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 437 FKVV 448
+KV+
Sbjct: 94 YKVI 97
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 46.0 bits (104), Expect = 7e-04
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +2
Query: 251 RTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 430
+ K+PNS RK RV+L GK +TA++P +G ++I+++ VLV G GR D PG
Sbjct: 54 KPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS----QDCPG 105
Query: 431 VRFKVVKVA 457
VR+ +V+ A
Sbjct: 106 VRYHLVRGA 114
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 46.0 bits (104), Expect = 7e-04
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +2
Query: 251 RTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 430
+ K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR D+PG
Sbjct: 69 KPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR----TQDLPG 120
Query: 431 VRFKVVK 451
V+ VV+
Sbjct: 121 VKLTVVR 127
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/81 (35%), Positives = 48/81 (59%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C + G R S K+PNSA+RK +V+L N + A++P +G ++++E+ VL+
Sbjct: 27 CPQKTGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIR 83
Query: 389 GFGRKGHAVGDIPGVRFKVVK 451
G GR V D+PGV+F ++
Sbjct: 84 G-GR----VKDLPGVKFHCIR 99
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +2
Query: 251 RTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 430
+ K+PNSA RKCV V+L NGK++ A++P G ++++E++ +++ GR V D PG
Sbjct: 87 KPKKPNSANRKCVLVRL-SNGKEMVAYIP--GIGHNLQEHN-IVLCRVGR----VQDCPG 138
Query: 431 VRFKVVK 451
V+ K V+
Sbjct: 139 VKIKCVR 145
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = +2
Query: 251 RTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 430
+ K+PNSA RKC ++L NGK ++A++P G ++E+ V+ G GR V D PG
Sbjct: 46 KPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR----VQDCPG 97
Query: 431 VRFKVVK 451
+++K+++
Sbjct: 98 IKYKIIR 104
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 44.8 bits (101), Expect = 0.002
Identities = 33/101 (32%), Positives = 57/101 (56%)
Frame = +2
Query: 149 GQRIQESPHGYEMEG*PFRWCISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTA 328
G I+ P ++G PF KG + + K+PNSA RKCV V+L GK++ A
Sbjct: 54 GPHIKTRPPRQPLDGKPFA-----KGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVA 107
Query: 329 FVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 451
++P G ++++E++ +++ GR + D+PGV+ K V+
Sbjct: 108 YIP--GIGHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 141
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 44.8 bits (101), Expect = 0.002
Identities = 33/101 (32%), Positives = 57/101 (56%)
Frame = +2
Query: 149 GQRIQESPHGYEMEG*PFRWCISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTA 328
G I+ P ++G PF KG + + K+PNSA RKCV V+L GK++ A
Sbjct: 40 GPHIKTRPPRQPLDGKPFA-----KGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVA 93
Query: 329 FVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 451
++P G ++++E++ +++ GR + D+PGV+ K V+
Sbjct: 94 YIP--GIGHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 127
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 44.4 bits (100), Expect = 0.002
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C ++G R S K+PNSA+ K +V+L N V A++P +G ++++E+ VLV
Sbjct: 90 CPQKQGVCLRVSTRTPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVR 146
Query: 389 GFGRKGHAVGDIPGVRFKVVK 451
G GR V D+PGV+F ++
Sbjct: 147 G-GR----VKDLPGVKFHCIR 162
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 436
K+PNSA+RK V+L N + V A++P G + ++E+D VLV +G V D+PGV+
Sbjct: 43 KKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKEHDRVLV-----RGGQVPDLPGVK 94
Query: 437 FKVV 448
+ +V
Sbjct: 95 YHIV 98
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 42.7 bits (96), Expect = 0.007
Identities = 34/99 (34%), Positives = 52/99 (52%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C +KG + K+PNSA RK +V L NGK + ++ +G + ++E+ VLV
Sbjct: 27 CPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HTLQEHSLVLVR 83
Query: 389 GFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPR 505
G GR V D+PGV++ V+ L A+ KK R +
Sbjct: 84 G-GR----VKDLPGVQYHFVR-GVYDLHAVGTRKKSRSK 116
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 42.3 bits (95), Expect = 0.009
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C +KG + + K+PNSA RK +++L + + A++P G ++++E VLV+
Sbjct: 27 CPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLVS 83
Query: 389 GFGRKGHAVGDIPGVRFKVVK 451
G GR D+PGVR+ ++K
Sbjct: 84 G-GR----APDLPGVRYTLIK 99
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 40.7 bits (91), Expect = 0.027
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 436
K+PNSA+RK +V+L N V +P +G ++++E+ +L G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 437 FKVVKVANVSLLALYKEKKERPR 505
+K V+ + L + K K R +
Sbjct: 98 YKAVR-GVLDLAGVQKRKTARSK 119
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 38.7 bits (86), Expect = 0.11
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 436
K+ NSA+RK RV+L +G ++T ++P G ++ +E+ VLV G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 437 FKVVK 451
+ +V+
Sbjct: 228 YHIVR 232
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 38.3 bits (85), Expect = 0.14
Identities = 25/83 (30%), Positives = 34/83 (40%)
Frame = -3
Query: 409 VTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSSTPTFSRT 230
+TF+T+S + A + G E L VLNEL+ DA DGR+ L P F +
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 229 MPFA*DAPPKGLAFHFVPMWAFL 161
PK + FL
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFL 83
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 242 FLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTV 126
F + ++LC+R T +R+ L VGFL FV P L +V
Sbjct: 57 FFQHNSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSV 95
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 38.3 bits (85), Expect = 0.14
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 436
K+PNSA RK ++L KN KK+ A++P G + + + VL+ G + D+PGV
Sbjct: 40 KKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNTR-----DLPGVN 91
Query: 437 FKVV 448
K+V
Sbjct: 92 HKIV 95
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 37.5 bits (83), Expect = 0.25
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 403
K+PNS RKC V+L G +V A++P G ++++E+ +VLV G GR+
Sbjct: 89 KKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLVKG-GRR 133
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 37.5 bits (83), Expect = 0.25
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 436
++PNS +RK RV+L G+ VT VP +G +++ + VLV G GR D+ G
Sbjct: 144 RKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLVRG-GR----CQDVSGCH 195
Query: 437 FKVVK 451
+KVV+
Sbjct: 196 YKVVR 200
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 36.3 bits (80), Expect = 0.58
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +2
Query: 209 CISRKGHRPRESWCRTKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVA 388
C ++G R S K+PNSA+RK +V+L N + A +P +G ++ +E+ VLV
Sbjct: 59 CPQKQGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVR 115
Query: 389 GFGRKGHAVGDIPGVR 436
G GR V D PG R
Sbjct: 116 G-GR----VKDSPGKR 126
>UniRef50_A4LVV0 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Geobacter bemidjiensis Bem|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Geobacter bemidjiensis Bem
Length = 596
Score = 35.5 bits (78), Expect = 1.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -3
Query: 202 KGLAFHFVPMWAFLNSLSAHRCSRRWFTCYAPFVFLGVYPFG*HDTN 62
+GL+F + WAF++++S H W + + F G+ P G H TN
Sbjct: 64 EGLSFESIK-WAFMSNVSGHWHPLTWLSLMMDYQFFGLDPMGYHLTN 109
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 34.7 bits (76), Expect = 1.8
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +2
Query: 302 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 481
IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 482 KEKKERPRS 508
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 33.1 bits (72), Expect = 5.5
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +2
Query: 257 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 436
K+PNSA R+ +V+ +K +T +P G ++++++ VL+ G GR D+ GV
Sbjct: 44 KKPNSANRRIAKVKTLKQPTFLTVKIP--GEKHNLQQHSTVLICG-GRS----KDLIGVH 96
Query: 437 FKVVKVANVSLLALYKEKKER 499
K V+ LL + K R
Sbjct: 97 LKAVR-GKFDLLGVNGRKSSR 116
>UniRef50_Q2J4L0 Cluster: Serine/threonine protein kinase; n=3;
Frankia|Rep: Serine/threonine protein kinase - Frankia
sp. (strain CcI3)
Length = 691
Score = 32.3 bits (70), Expect = 9.5
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = -1
Query: 558 YKQRASRQQVTYHNVH----LDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPN 391
Y RA++Q V +NV +D S ++ R TL+ ++ T +PT P P
Sbjct: 575 YGLRAAQQPVANNNVAPGTVVDQSPSGGNVPRGSTITLSVAQQIQTTAPPTPTETPTGPT 634
Query: 390 PATSTSSFSSMWFRQPSRGTNAVT 319
P T +S S P+ GT A T
Sbjct: 635 PTTEPTSTSPSPTGNPTPGTPATT 658
>UniRef50_A2ECQ2 Cluster: Serine/threonine protein phosphatase; n=1;
Trichomonas vaginalis G3|Rep: Serine/threonine protein
phosphatase - Trichomonas vaginalis G3
Length = 481
Score = 32.3 bits (70), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 277 DGRVGLLSSTPTFSRTMPFA*DAPPKGLAFHFVPM 173
DGR+GL ST ++ R P D PP + +P+
Sbjct: 283 DGRMGLQRSTKSYVRKEPVTLDTPPTNFSIKLIPL 317
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,219,505
Number of Sequences: 1657284
Number of extensions: 14525261
Number of successful extensions: 36215
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 34880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36117
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -