Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00716
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   0.89 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.3  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 197 PFRWCISRKGHRPRESWCRTK 259
           PF+W   +K  R RES   T+
Sbjct: 323 PFKWLFKKKKRRNRESTTNTQ 343


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 404 GHAVGDIPGVR 436
           G AVGD+PG+R
Sbjct: 62  GTAVGDVPGLR 72


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 617 FFFLLYTIFIMY*DFTFYELINNALPDSRSLITMYTLILVA 495
           F+   YT+  +Y  F      NN+L  ++ LI +   +++A
Sbjct: 60  FYITSYTLLSVYSLFRIATNENNSLVINKRLIFIECFVMMA 100


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 617 FFFLLYTIFIMY*DFTFYELINNALPDSRSLITMYTLILVA 495
           F+   YT+  +Y  F      NN+L  ++ LI +   +++A
Sbjct: 60  FYITSYTLLSVYSLFRIATNENNSLVINKRLIFIECFVMMA 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,560
Number of Sequences: 336
Number of extensions: 3538
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)