Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00715
(623 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 148 7e-37
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 128 6e-31
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 120 1e-28
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 105 4e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 73 3e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 1e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.24
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.72
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 28 0.95
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 2.9
SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|ch... 26 3.8
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 5.1
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 25 6.7
SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|c... 25 6.7
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 8.9
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 8.9
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 8.9
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 148 bits (358), Expect = 7e-37
Identities = 86/182 (47%), Positives = 108/182 (59%), Gaps = 2/182 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-TT 259
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP T
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 260 QYSMPNVSSDVSPKMLLCKPT*STGLSRLSVMEANLRSR*HIRVKTKPFSPRK-SVPWCX 436
+ + + + + K S ++ L ++ K K F+P + S
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPL-VEVNVGGKKKKFTPEEISAMILS 156
Query: 437 XXXXXXXXXXXXXXCRMQYHGSRVFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 616
FND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGL
Sbjct: 157 KMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGL 216
Query: 617 DK 622
DK
Sbjct: 217 DK 218
Score = 100 bits (240), Expect = 1e-22
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPM 429
P NTIFD KRLIGRK ++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 430 VLTKMKETAEAYLGKTVQNAVSRFP 504
+L+KMK+TAEAYLGK V +AV P
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVP 178
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 128 bits (309), Expect = 6e-31
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPM 429
PHNTIFDAKRLIGRK +D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+S M
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 430 VLTKMKETAEAYLGKTVQNAVSRFP 504
VL KM+ETAEAYLG V +AV P
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVP 145
Score = 112 bits (269), Expect = 5e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 74.9 bits (176), Expect = 8e-15
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +2
Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 622
FNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+
Sbjct: 148 FNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 120 bits (290), Expect = 1e-28
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPM 429
PHNTIFDAKRLIGR+ D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+S M
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 430 VLTKMKETAEAYLGKTVQNAVSRFP 504
VL KM+E+AEA+LG V +AV P
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVP 145
Score = 112 bits (269), Expect = 5e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 74.9 bits (176), Expect = 8e-15
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +2
Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 622
FNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+
Sbjct: 148 FNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDR 185
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 105 bits (253), Expect = 4e-24
Identities = 49/85 (57%), Positives = 60/85 (70%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPM 429
P NT+FDAKRLIGR+ ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 430 VLTKMKETAEAYLGKTVQNAVSRFP 504
VLTKMKE +EA L K V+ AV P
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVP 149
Score = 100 bits (239), Expect = 2e-22
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 70.1 bits (164), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 619
F+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 152 FSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLD 188
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 73.3 bits (172), Expect = 3e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 248 NPTTQY 265
NP +
Sbjct: 109 NPENTF 114
Score = 71.7 bits (168), Expect = 8e-14
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +2
Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 622
FNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDK
Sbjct: 194 FNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDK 231
Score = 69.3 bits (162), Expect = 4e-13
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKSEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPM 429
P NT F KRLIGR+ ++ VQ D+K P+++V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 430 VLTKMKETAEAYLGKTVQNAVSRFP 504
+L+KM+ETA YLGK V+NAV P
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVP 191
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 N 250
N
Sbjct: 63 N 63
Score = 43.6 bits (98), Expect = 2e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 509 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 622
F D QR+A +A I+GLN LR++N+ AAA+ YG+ K
Sbjct: 152 FTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITK 189
Score = 33.1 bits (72), Expect = 0.034
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKSEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPMV 432
NT+ KRL GR +D ++ + ++ G KV Y E+ F ++
Sbjct: 66 NTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAY 125
Query: 433 LTKMKETAEAYLGKTVQNAVSRFP 504
TK+K AEA L +V + V P
Sbjct: 126 FTKIKAIAEAELIGSVSDVVISIP 149
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.24
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 260 QYSMPNV 280
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.72
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 28.3 bits (60), Expect = 0.95
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 179 PSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSPKMLLC 313
P +A T ER++ AAK A+N T Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 2.9
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 108 TLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRTRWR*TPQHNI 266
T +L S+STG+ T++ T L + PS S+ P T + TP +NI
Sbjct: 282 TSSLTSNSTGK-----TSKTTDLLIAASKKSLPSNSTPSKPNTSFFETPHNNI 329
>SPBC839.02 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 530
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +1
Query: 367 KIKVAYKGEDKTFFPEEVSPMVLTKMKETA 456
KI++++KG+ +T +PE + P + +E +
Sbjct: 115 KIQLSFKGKSRTEWPEGIPPKLFDTYEENS 144
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 5.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 6.7
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 203 TERLIGDAAKNQVAMNPTTQYSMPNV-SSDVSPKMLLCKPT*STGLSRLSVMEANLRSR* 379
T RLI N + M T +P + + ++PK+L P + +S ++++A L++
Sbjct: 310 TSRLILVGIANALDM---TDRFLPRLRTKHITPKLLSFTPYTAQEIS--TIIKARLKTAA 364
Query: 380 HIRVKTKPFSPRKSV 424
K PF+P KS+
Sbjct: 365 TTSEKNNPFTPIKSI 379
>SPAC1A6.08c |mug125||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 393 RQNLFPRGSQSHGAYENEGNCRSL 464
R+NLF + +++G E+E +CRS+
Sbjct: 51 RENLFFKEMRTNGKNEHETSCRSV 74
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 8.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 390 TLICYLDLRFASITDNLERPVLHVGLHSSIFGLTSDETFGI 268
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -1
Query: 350 LTTSKGQCFMSACTVASSDLRPMRRLASNIVLWGSSPPGSWRHL 219
L S+ + ++S V +RP + + +IV+ GS++H+
Sbjct: 1173 LNASQAEAYLSKMQVGDLVIRPSSKGSDHIVVTWKVAEGSYQHI 1216
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 8.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 61 QNGKSTRSRNRSGYHVLLRWCLPARE 138
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,770,889
Number of Sequences: 5004
Number of extensions: 60733
Number of successful extensions: 204
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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