Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00713
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0FEN4 Cluster: Phosphoenolpyruvate carboxylase; n=1; a...    34   4.1  

>UniRef50_Q0FEN4 Cluster: Phosphoenolpyruvate carboxylase; n=1;
           alpha proteobacterium HTCC2255|Rep: Phosphoenolpyruvate
           carboxylase - alpha proteobacterium HTCC2255
          Length = 907

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = -1

Query: 289 GQVFKHSLTIYNFSMYCIVYLINKESTFRRFNHFTK*IDIIFYRNNKVLCVNKICSRYNR 110
           G+VF+ SLT  +F +  I+   N  + +     F K +D++   N   L   +I ++Y R
Sbjct: 328 GEVFRKSLTAIDFRLEAIINPENGATPYASCEEFRKDLDLV--DNVLSLAAREISNQYIR 385

Query: 109 IVFALND*SMFLEIGLHSTKQHKDV--HSLSNI 17
            + AL+    F  + L   +Q+ DV   ++SNI
Sbjct: 386 PIQALHSSCGFRTMSL-DIRQNSDVTTDAISNI 417


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,457,505
Number of Sequences: 1657284
Number of extensions: 10212582
Number of successful extensions: 20220
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 19438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20208
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)