Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00712
         (775 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050922-1|CAJ19459.1|  102|Homo sapiens immunoglobulin heavy ch...    33   0.86 
AY392932-1|AAS85872.1|  151|Homo sapiens immunoglobulin heavy ch...    33   1.1  
AF127792-1|AAD33344.1|  120|Homo sapiens immunoglobulin heavy ch...    33   1.5  
AF103357-1|AAD20526.1|  120|Homo sapiens immunoglobulin heavy ch...    31   3.5  
BC109193-1|AAI09194.1|  757|Homo sapiens KIRREL protein protein.       31   4.6  
BC109192-1|AAI09193.1|  757|Homo sapiens KIRREL protein protein.       31   4.6  
BC082969-1|AAH82969.1|  446|Homo sapiens KIRREL protein protein.       31   4.6  
BC067097-1|AAH67097.1|  446|Homo sapiens KIRREL protein protein.       31   4.6  
BC059398-1|AAH59398.1|  327|Homo sapiens embigin homolog (mouse)...    31   4.6  
BC051356-1|AAH51356.1|  446|Homo sapiens KIRREL protein protein.       31   4.6  
BC025268-1|AAH25268.1|  523|Homo sapiens Unknown (protein for IM...    31   4.6  
AY302131-1|AAP59845.1|  593|Homo sapiens NEPH1 protein protein.        31   4.6  
AY017369-1|AAK00529.1|  605|Homo sapiens NEPH1 protein.                31   4.6  
AL139010-3|CAH73883.1|  571|Homo sapiens kin of IRRE like (Droso...    31   4.6  
AL139010-2|CAH73882.1|  593|Homo sapiens kin of IRRE like (Droso...    31   4.6  
AL139010-1|CAH73881.1|  757|Homo sapiens kin of IRRE like (Droso...    31   4.6  
AK022708-1|BAB14192.1|  571|Homo sapiens protein ( Homo sapiens ...    31   4.6  
AK001707-1|BAA91850.1|  410|Homo sapiens protein ( Homo sapiens ...    31   4.6  
AY062326-1|AAL65754.1|  124|Homo sapiens immunoglobulin heavy ch...    31   6.1  

>AM050922-1|CAJ19459.1|  102|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 102

 Score = 33.5 bits (73), Expect = 0.86
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 638 FTVERSNSNSTLFFSHAGLRPALVGLSISTRGHCTLLPSKTIW 766
           FT+ R N+ ++LF     LRP    +    RG  T++P    W
Sbjct: 53  FTISRDNAKNSLFLQMNSLRPEDTAVYFCARGRLTMIPVLDSW 95


>AY392932-1|AAS85872.1|  151|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 151

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 638 FTVERSNSNSTLFFSHAGLRPALVGLSISTRG 733
           FTV R NS +T+F    GLRP   G+    RG
Sbjct: 81  FTVSRDNSKNTVFLQMTGLRPEDTGVYYCVRG 112


>AF127792-1|AAD33344.1|  120|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 120

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 638 FTVERSNSNSTLFFSHAGLRPALVGLSISTRGHCT 742
           FT+ R NS +T+F    GLRP    +    R HC+
Sbjct: 68  FTISRDNSKNTVFLQMNGLRPEDTTVYYCARRHCS 102


>AF103357-1|AAD20526.1|  120|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 120

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 638 FTVERSNSNSTLFFSHAGLRPALVGLSISTRGHCTLLPSKTIWQES 775
           FT+ R NS +TL+     LR    G+    + H   L   T+W +S
Sbjct: 59  FTISRDNSKNTLYLQVNSLRTEDTGVYYCAKDHDVGLHPSTLWGDS 104


>BC109193-1|AAI09194.1|  757|Homo sapiens KIRREL protein protein.
          Length = 757

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 423 RIAWAWKENFLEVGTLERYTVERTNSGS 450


>BC109192-1|AAI09193.1|  757|Homo sapiens KIRREL protein protein.
          Length = 757

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 423 RIAWAWKENFLEVGTLERYTVERTNSGS 450


>BC082969-1|AAH82969.1|  446|Homo sapiens KIRREL protein protein.
          Length = 446

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 112 RIAWAWKENFLEVGTLERYTVERTNSGS 139


>BC067097-1|AAH67097.1|  446|Homo sapiens KIRREL protein protein.
          Length = 446

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 112 RIAWAWKENFLEVGTLERYTVERTNSGS 139


>BC059398-1|AAH59398.1|  327|Homo sapiens embigin homolog (mouse)
           protein.
          Length = 327

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 370 KNKYIINYVTSSNKAWCQCNGCLQGNQAWSPS 275
           KNK +I+YV  S    C+C  C   N  W  S
Sbjct: 164 KNKPLISYVGDSTVLTCKCQNCFPLNWTWYSS 195


>BC051356-1|AAH51356.1|  446|Homo sapiens KIRREL protein protein.
          Length = 446

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 112 RIAWAWKENFLEVGTLERYTVERTNSGS 139


>BC025268-1|AAH25268.1|  523|Homo sapiens Unknown (protein for
           IMAGE:4860359) protein.
          Length = 523

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 189 RIAWAWKENFLEVGTLERYTVERTNSGS 216


>AY302131-1|AAP59845.1|  593|Homo sapiens NEPH1 protein protein.
          Length = 593

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 259 RIAWAWKENFLEVGTLERYTVERTNSGS 286


>AY017369-1|AAK00529.1|  605|Homo sapiens NEPH1 protein.
          Length = 605

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 423 RIAWAWKENFLEVGTLERYTVERTNSGS 450


>AL139010-3|CAH73883.1|  571|Homo sapiens kin of IRRE like
           (Drosophila) protein.
          Length = 571

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 237 RIAWAWKENFLEVGTLERYTVERTNSGS 264


>AL139010-2|CAH73882.1|  593|Homo sapiens kin of IRRE like
           (Drosophila) protein.
          Length = 593

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 259 RIAWAWKENFLEVGTLERYTVERTNSGS 286


>AL139010-1|CAH73881.1|  757|Homo sapiens kin of IRRE like
           (Drosophila) protein.
          Length = 757

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 423 RIAWAWKENFLEVGTLERYTVERTNSGS 450


>AK022708-1|BAB14192.1|  571|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12646 fis, clone NT2RM4001987, weakly similar to
           NEURAL CELL ADHESION MOLECULE 1, LARGE ISOFORM
           PRECURSOR. ).
          Length = 571

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 237 RIAWAWKENFLEVGTLERYTVERTNSGS 264


>AK001707-1|BAA91850.1|  410|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10845 fis, clone NT2RP4001372, weakly similar to
           IRREGULAR CHIASM C-ROUGHEST PROTEIN PRECURSOR. ).
          Length = 410

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 584 RLIWVWLINYRQIFGVDCFTVERSNSNS 667
           R+ W W  N+ ++  ++ +TVER+NS S
Sbjct: 76  RIAWAWKENFLEVGTLERYTVERTNSGS 103


>AY062326-1|AAL65754.1|  124|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 124

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 638 FTVERSNSNSTLFFSHAGLRPALVGLSISTRGH 736
           FT+ R NS +TL+     LRP    +    RGH
Sbjct: 60  FTISRDNSKNTLYLQMNSLRPEDTAVYFCARGH 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,869,482
Number of Sequences: 237096
Number of extensions: 2122117
Number of successful extensions: 11661
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11660
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)