Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00710
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       25   0.59 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   0.78 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   0.78 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   0.78 
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   1.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.3  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 114 EKGRLQTSQLEAMALDHDDLRLTVEQIPS 200
           EKGR++ S ++ + LD  D  L +  +PS
Sbjct: 339 EKGRVKFSSVQFLVLDEADRMLDMGFLPS 367


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 308 LWCGIYNRKLGPLEPGK 358
           LWCG  N+  GP E G+
Sbjct: 35  LWCGHGNKSSGPNELGR 51


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 308 LWCGIYNRKLGPLEPGK 358
           LWCG  N+  GP E G+
Sbjct: 40  LWCGHGNKSSGPNELGR 56


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 308 LWCGIYNRKLGPLEPGK 358
           LWCG  N+  GP E G+
Sbjct: 40  LWCGHGNKSSGPNELGR 56


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 378 VKFMNVVFPGSRGPNF 331
           +KF+N+ FPG +   F
Sbjct: 238 IKFVNIFFPGGKKTTF 253


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 64  GPCGLTSFAMFSFGLSQYKN 5
           GP     FA+F+ G S Y N
Sbjct: 599 GPLSNVRFAVFALGSSAYPN 618


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 276 NMRSKVLYWHSQLYI*M*KLHLHILY 199
           ++  +V YW   + I +   H H++Y
Sbjct: 191 DVEHRVAYWREDIGINLHHWHWHLVY 216


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 124  DYRLVSWKPWHSIMTT 171
            DY L     WH++MTT
Sbjct: 1458 DYPLRLGPCWHAVMTT 1473


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,586
Number of Sequences: 438
Number of extensions: 2332
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)