Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00707
         (804 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    27   0.23 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      27   0.23 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.7  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    21   8.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 271 PRPQPAQRSVTDPRPPGPGETDHQ 200
           P+P+P + S   PRPP P + + +
Sbjct: 253 PKPRPTKVSRRKPRPPRPTQVEEE 276


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 58  YDGRAHVHCTVK 93
           Y+ RAH+HC+VK
Sbjct: 87  YESRAHIHCSVK 98


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 301 RTSRGRSYSAPRPQ 260
           R SRGR Y+ P PQ
Sbjct: 343 RMSRGRQYNYPNPQ 356


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 301 RTSRGRSYSAPRPQ 260
           R SRGR Y+ P PQ
Sbjct: 291 RMSRGRQYNYPNPQ 304


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 271 PRPQPAQRSVTDPRPPGPGETDHQ*THRAQS 179
           P PQP Q + ++P       T+   T + Q+
Sbjct: 399 PEPQPTQTTESEPTQASEQPTESSTTQKPQT 429


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 134 FGFGTFLRLLAKRIIRLSPVCLLVIGFAGTWW 229
           + F  F+ +++ R  ++S +C L+    GT W
Sbjct: 29  YDFENFV-IISPRCDKISAICFLLSTILGTCW 59


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = +2

Query: 62   TVVHMFIVLSSFLTAHNLLRSDKQFGFGTFLRLLAKRIIRL 184
            T+  +    SSF+T HN++     +  G    ++++  + L
Sbjct: 1221 TIFTIITATSSFVTIHNVIGQFLGYFIGLITFVMSQHCVEL 1261


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 466 FIGAIVLNAGLAYIPN 513
           +IG +V N G+A++ N
Sbjct: 246 YIGVVVANVGVAFMIN 261


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 509 RMEVNVVFCNSRRKCPHFI 565
           R++VN  F N R+  P+FI
Sbjct: 5   RVKVNNGFANLRQHIPNFI 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,890
Number of Sequences: 336
Number of extensions: 5102
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)