Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00707
(804 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060873-1|AAH60873.1| 157|Homo sapiens LOC400451 protein protein. 37 0.074
AK075564-1|BAC11703.1| 157|Homo sapiens protein ( Homo sapiens ... 36 0.17
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 33 0.91
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 33 0.91
AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein. 33 0.91
CR456584-1|CAG30470.1| 466|Homo sapiens SOX10 protein. 31 3.7
BT020029-1|AAV38832.1| 466|Homo sapiens SRY (sex determining re... 31 3.7
BC007595-1|AAH07595.1| 466|Homo sapiens SRY (sex determining re... 31 3.7
BC002824-1|AAH02824.1| 466|Homo sapiens SRY (sex determining re... 31 3.7
AL031587-5|CAB62982.1| 466|Homo sapiens SRY (sex determining re... 31 3.7
AJ001183-1|CAA04576.1| 466|Homo sapiens Sox10 protein protein. 31 3.7
CR536571-1|CAG38808.1| 466|Homo sapiens SOX10 protein. 31 6.4
>BC060873-1|AAH60873.1| 157|Homo sapiens LOC400451 protein protein.
Length = 157
Score = 37.1 bits (82), Expect = 0.074
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -3
Query: 307 APRTSRGRSYSAPRPQPAQRSVTDPRPPGPGET 209
A R SR S SAPRP+P +R P PGPG T
Sbjct: 23 AARASRAESVSAPRPEP-ERESRPPPGPGPGNT 54
>AK075564-1|BAC11703.1| 157|Homo sapiens protein ( Homo sapiens
cDNA PSEC0264 fis, clone NT2RP3002337. ).
Length = 157
Score = 35.9 bits (79), Expect = 0.17
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = -3
Query: 301 RTSRGRSYSAPRPQPAQRSVTDPRPPGPGET 209
R SR S SAPRP+P +R P PGPG T
Sbjct: 25 RASRAESVSAPRPEP-ERESRPPPGPGPGNT 54
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 33.5 bits (73), Expect = 0.91
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSN 176
S SAP P P S +P PP P +T Q TH+ N
Sbjct: 1908 SASAPAPAPTPVSAPNPAPPAPAQTQAQ-THKPVQN 1942
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 33.5 bits (73), Expect = 0.91
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSN 176
S SAP P P S +P PP P +T Q TH+ N
Sbjct: 1908 SASAPAPAPTPVSAPNPAPPAPAQTQAQ-THKPVQN 1942
>AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein.
Length = 1919
Score = 33.5 bits (73), Expect = 0.91
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSN 176
S SAP P P S +P PP P +T Q TH+ N
Sbjct: 931 SASAPAPAPTPVSAPNPAPPAPAQTQAQ-THKPVQN 965
>CR456584-1|CAG30470.1| 466|Homo sapiens SOX10 protein.
Length = 466
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSNYSFREQP 155
SY P +P +++DP P GP H TH Q Y+ +P
Sbjct: 426 SYMGPSQRPLYTAISDPSPSGP--QSHSPTHWEQPVYTTLSRP 466
>BT020029-1|AAV38832.1| 466|Homo sapiens SRY (sex determining
region Y)-box 10 protein.
Length = 466
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSNYSFREQP 155
SY P +P +++DP P GP H TH Q Y+ +P
Sbjct: 426 SYMGPSQRPLYTAISDPSPSGP--QSHSPTHWEQPVYTTLSRP 466
>BC007595-1|AAH07595.1| 466|Homo sapiens SRY (sex determining
region Y)-box 10 protein.
Length = 466
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSNYSFREQP 155
SY P +P +++DP P GP H TH Q Y+ +P
Sbjct: 426 SYMGPSQRPLYTAISDPSPSGP--QSHSPTHWEQPVYTTLSRP 466
>BC002824-1|AAH02824.1| 466|Homo sapiens SRY (sex determining
region Y)-box 10 protein.
Length = 466
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSNYSFREQP 155
SY P +P +++DP P GP H TH Q Y+ +P
Sbjct: 426 SYMGPSQRPLYTAISDPSPSGP--QSHSPTHWEQPVYTTLSRP 466
>AL031587-5|CAB62982.1| 466|Homo sapiens SRY (sex determining
region Y)-box 10 protein.
Length = 466
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSNYSFREQP 155
SY P +P +++DP P GP H TH Q Y+ +P
Sbjct: 426 SYMGPSQRPLYTAISDPSPSGP--QSHSPTHWEQPVYTTLSRP 466
>AJ001183-1|CAA04576.1| 466|Homo sapiens Sox10 protein protein.
Length = 466
Score = 31.5 bits (68), Expect = 3.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSNYSFREQP 155
SY P +P +++DP P GP H TH Q Y+ +P
Sbjct: 426 SYMGPSQRPLYTAISDPSPSGP--QSHSPTHWEQPVYTTLSRP 466
>CR536571-1|CAG38808.1| 466|Homo sapiens SOX10 protein.
Length = 466
Score = 30.7 bits (66), Expect = 6.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 283 SYSAPRPQPAQRSVTDPRPPGPGETDHQ*THRAQSNYSFREQP 155
SY P +P +++DP P GP H TH Q Y +P
Sbjct: 426 SYMGPSQRPLYTAISDPSPSGP--QSHSPTHWEQPVYMTLSRP 466
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,334,921
Number of Sequences: 237096
Number of extensions: 3360476
Number of successful extensions: 12830
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12775
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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